| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 986,786 | C→A | 6.8% | Q367K (CAA→AAA) | spoVR → | stage V sporulation protein SpoVR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 986,786 | 0 | C | A | 6.8% | 1024.8 / 15.8 | 377 | Q367K (CAA→AAA) | spoVR | stage V sporulation protein SpoVR |
| Reads supporting (aligned to +/- strand): ref base C (155/183); new base A (2/37); total (157/220) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.56e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 385 total aligned reads displayed.
AGAAATGAAGAAAATGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCT > NZ_CP034943/986647‑986924 | agaaATGAAGAAAATGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTc < 1:90731/140‑1 (MQ=255) aTGAAGAAAATGGGCGTGAATAATTTATAATACAGCGAGAAAATGTTTGAGCTAAAACAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAATACTTAGTTATGCTCGAGGATCTTTATTTGTTTAaaaa > 2:4828785/1‑140 (MQ=255) tGAAGAACAGGGGCGTGAAGCCTGGCTCAGGCAGGGAGAACATGTTTGAGGTCAGGGAACTTGAATCCGATATCTCTGTCATCCGCACTTACTTAACCCGAGACTGAGTTAGGCGCGGGGATCGTTATTGGGTTCaacag > 2:7399192/1‑137 (MQ=255) tGAAGAAAATGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCaaaaa < 2:2771421/140‑1 (MQ=255) aagaaAATGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACa < 1:7075446/140‑1 (MQ=255) aagaaAATGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACa < 1:4655952/140‑1 (MQ=255) aaTGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCa < 1:2716389/140‑1 (MQ=255) ctGGGCGTGAAGCCTGGCTCAGGCAGGGAGACAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAACAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCag < 1:6033993/139‑1 (MQ=255) tGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCaga < 1:1186561/140‑1 (MQ=255) gCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGAt > 2:3256104/1‑140 (MQ=255) tGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTCTGCGCGAGGTTCTTTATTTGTTTCAACAACAGGGCAGAGCTtat > 1:5966888/1‑140 (MQ=255) tGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATtat > 1:6724262/1‑140 (MQ=255) ccTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAt > 2:6256326/1‑140 (MQ=255) tGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAtcg > 1:2149106/1‑140 (MQ=255) tGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAtcg > 2:6845164/1‑140 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa < 1:5087182/140‑1 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa < 1:4935113/140‑1 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCGTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa < 1:1933726/140‑1 (MQ=255) ggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaa > 1:2386165/1‑140 (MQ=255) ggcaggGAGAAAATGTTGGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGAGTATAAAATCGTCGACaa > 1:5048337/1‑140 (MQ=255) gcaggGAGAACATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:2910031/1‑140 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCaga < 1:2466169/119‑1 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:279650/1‑140 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:1876995/1‑140 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:4542453/1‑140 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAaataat > 1:5224583/1‑140 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAt > 1:4416653/1‑140 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAt > 2:5787868/1‑140 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAt > 1:1005307/1‑140 (MQ=255) gagaAAATGTTTGAGGTCAGGGAAATTGGATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCaaaaa < 2:1249528/105‑1 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAt > 1:2195625/1‑140 (MQ=255) tttGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGAGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGt > 1:3698672/1‑140 (MQ=255) ttGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGACATCGGTa > 2:3408281/1‑140 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 1:5537045/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:5469377/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:5690391/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACACGAc < 1:827350/140‑1 (MQ=255) gggAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGa < 2:2083771/118‑1 (MQ=255) gggAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAGCAg > 1:608795/1‑140 (MQ=255) gAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAg < 1:5802667/140‑1 (MQ=255) aTCCGATATCTCTTTCATCCGCAATGACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAACATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCa < 1:1328164/140‑1 (MQ=255) tCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:6921806/126‑1 (MQ=255) ccGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATg < 2:7162814/140‑1 (MQ=255) atatCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCgg > 2:6597746/1‑140 (MQ=255) tatCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCggg < 2:3227828/140‑1 (MQ=255) tCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGc > 2:383784/1‑114 (MQ=255) tCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCggg > 2:6369944/1‑140 (MQ=255) ccGCAATTATTTAACCAAAGAATTAGTCATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCCGAGATTATAAAATCATCGATAAACAGTGGAAGTCGGTGCGCGACCAGCTCGTAAGCATGCGGGTAAAtggcggtt > 2:6912241/1‑138 (MQ=255) ccGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGt < 1:5750627/140‑1 (MQ=255) ccGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGt > 1:4842552/1‑140 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt < 2:6447126/140‑1 (MQ=255) aaTTACTTAACACAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTcc < 2:4021018/140‑1 (MQ=255) ttAACAAAAGACTTAGTTATGCGCGAGGATGTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCatatgt > 2:5172159/1‑138 (MQ=255) aaaaaaaGACTTAGTTATGCGCGAGGATCTTTTTTTTTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGa < 1:1595539/137‑1 (MQ=255) aaCAAAAGACTTAGTTATGCGCGAGTATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGACTGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGTGTTTCCATATTTGa < 2:4419983/140‑1 (MQ=255) aaCAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGa > 1:6228473/1‑140 (MQ=255) aaCAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGa > 1:7636010/1‑140 (MQ=255) cAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAATTCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACa < 2:5342098/140‑1 (MQ=255) cAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACa < 2:1606384/140‑1 (MQ=255) cAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACa > 1:7694802/1‑140 (MQ=255) cAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACa < 2:2911199/140‑1 (MQ=255) aGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAacgacg > 2:263989/1‑140 (MQ=255) aGTTAGGCGCGTGTATCTTTATTTGTTAAAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGATTGCAAATCGTTACGCGACCAGCTCGTGAGCTTGGGGTTAAACGGCGGGTTTCCTTATTTGACAGTAAacgacg < 1:5334786/140‑1 (MQ=255) tGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTCAACGGCGGGTTTCCATATTTGACAGTCAACGACGGTGag > 1:4466492/1‑139 (MQ=255) ggATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGa > 2:417925/1‑140 (MQ=255) ttATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATa > 2:7707736/1‑140 (MQ=255) tttttttTCAAAAACAGGGCAGATTTTATAAAATGGTCGACAAAGAATGGAAATCGGTACGCGCCCAGCTCGTGAGCATGCGGGTAAACGGGGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATGAc < 1:7365078/139‑1 (MQ=255) tttttttTAAAAAACCGGCCAGATATTATAAAATCGTCGACAAATAATGCAAATCGTTACGCGACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:6475963/139‑1 (MQ=255) tttgttttCAAAAACAGGCCAGAGTTTATAAAATCGTCGAAAAAGAAGGGAAAGCGGTACGCGACCTGCTCGTGAGCATGCGGGTAAACGGCGGTTTTCCATATTTGACTGTAAACGACGGTGATTACATGAAAAATAAc < 2:1101351/135‑1 (MQ=255) aTTTTTTTCAAAAACAGGGCAGATATTATAAAATCGTCTAAAAATAATGGAAATCGGTACGCGACCAGCTCGTGAGAATGCGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:7553822/140‑1 (MQ=255) aTTTTTTTCAAAAACAGGGCAGAGATAATAAAATCGTCGACAAAGAATGGAAATCGGTCCGCGACCAGCTCGTGAGCATGGGGGTAAACGGCGGGTTTCCATATTTGACATTAAACGACGGTGATTACATGAAAAATAAc < 2:4969177/140‑1 (MQ=255) aTTTTTTTAAAAAACAGGGCAGATTTTATAAAATCGTCGACAAAGATGGGAAATCGGTACGCGCCCAGCTCGTGAGCTTGCGGTTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:6959776/140‑1 (MQ=255) aTTTGTTTCAAAAACAGGGCAGATATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGATTGCGGGTAAACGGGGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:3518476/140‑1 (MQ=255) aTTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:2282970/140‑1 (MQ=255) aTTTGTTTCAAAAACAGGCCAGAGATTATAAAATCGTCGAAAAATAATGGAAATGGGTACGCGACCAGCTCGTGAGCATGGGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:3113563/140‑1 (MQ=255) aTTTGTTTAAAAACCAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAGCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:469187/140‑1 (MQ=255) aTTTGTTTAAAAAACAGGGCAGATTTTATAAAATCGTCGAAAAAGAATGGAAATCGTTACGCGACCCGCTCTTGAGCATGCGGGTAAACGGCGGTTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:6746635/140‑1 (MQ=255) aTTTGTTTAAAAAACAGGGCAGACATTATAAAATCGTCGACAAACAATGGAAATCGGTACGCCACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:1797577/140‑1 (MQ=255) aTTTGTTACAAAAACAGGGCAGAGATTATAAAATCGTCGAAAAAGAATGGAAATGGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:1418409/140‑1 (MQ=255) aTTTGTTAAAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAATTGGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTTACATTAAACGACGGTGATTACATGAAAAATAAc < 2:6042850/140‑1 (MQ=255) aTTGGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCTACAAAGAATGGAAAGCGGTACGCGACCAGCTCGTGAGCATGGGGGTAACCGGCGGGTTTCCATATTTGACATTAAACGACGGTGATTACATGAAAAATAAc < 2:1684098/140‑1 (MQ=255) tGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAg < 2:450287/140‑1 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAATAATGCAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc < 2:1008456/140‑1 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:5050635/61‑1 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt > 1:3403805/1‑94 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc > 1:1797577/1‑140 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAAAAACGAGc > 2:4339104/1‑140 (MQ=255) tttCAAAAACAGGGCAGATATTATAAAATCGTCGACAAAGAATGTAAATCGGTACGCGACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:245251/140‑1 (MQ=255) tttCAAAAACAGGGCAGAGATTATAAACTCTTCGACAAACAAGGGAAATCGGTACGCGCCCAGCTCGTGCGCAGGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:7611368/140‑1 (MQ=255) tttCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACATTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:1228848/140‑1 (MQ=255) tttAAAAAACTGGGCATATATTATAAAATCGTCTACAAAGATTGCAAATGGGTACGCGACCAGGTGGTGAGCATGGGGTTAAACGGGGGGTTTCAATATTTGACTGTACACGACGGTGATTACATGAAAAATAACGAGct < 1:6497321/140‑1 (MQ=255) tttAAAAAACAGGGCATATATTATAAAATCGTCGAAAAACAATGTAAATGGGTACGCCACCAGCTCGTGAGCATGCGGTTAAACGGGGGTTTTCCATATTTGACATTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:3809130/140‑1 (MQ=255) tttAAAAAACAGGGCAGAGATTATAAAATGGTCGAAAAAGATTGGAAATCGGTACGCCACCCGCTCGTGAGAATGCGGTTAAACGGCGGTTTTCCATATTTCACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:3614198/140‑1 (MQ=255) tttAAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCTTGCGGTTAAACGGGGGGTTTCCATATTTGAAAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:7268859/140‑1 (MQ=255) tttAAAAAACAGGCCATAGATTATAAAATCTACCAAAAATATGGCAAAGCGGTACGCCCCCAGCTGTTGAGAAGGGGGTTAAAGGGGGGTTTTCAATATTTTACATTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:2016649/140‑1 (MQ=255) ttacAAAAACTGGGCATAGTTTATAAAATCGTCGACAAAGATTGGAAATGGGTACGCGACCTGCTCGTGAGCATGGGGTTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:6371859/137‑1 (MQ=255) ttacAAAAACAGGGCCTACATTATAAAATCGTCCACAAACAATGCAAATCGGTCCGCGACCAGCTCTTGAGCATGCGGGTAAACGCCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:7346334/137‑1 (MQ=255) ttacAAAAACAGGGCAGTGATTATAAATTCGTCGACAAACAATGTAAATCGGTACGCGACCCGGTGGTGAGCTTGGGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:396890/137‑1 (MQ=255) ctccAAAACCCGGCCAGATATTATAAAATCTTCGCAAAAGATTGCAATTCGGTACGCGACAAGCTCGTGAGCATGCGGGTAACCGGGGGTTTTCAATATTTCACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:3228198/137‑1 (MQ=255) tCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGctc > 1:1742463/1‑139 (MQ=255) | AGAAATGAAGAAAATGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCT > NZ_CP034943/986647‑986924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |