| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,097,455 | C→A | 11.4% | I66I (ATC→ATA) | EO946_RS05675 → | MarR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,097,455 | 0 | C | A | 11.4% | 596.6 / 17.6 | 261 | I66I (ATC→ATA) | EO946_RS05675 | MarR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (121/100); new base A (4/36); total (125/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 295 total aligned reads displayed.
AGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGC > NZ_CP034943/1097316‑1097594 | agcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatc > 1:3056702/1‑140 (MQ=255) gcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatca < 2:5725947/140‑1 (MQ=255) gcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatca < 1:7308712/140‑1 (MQ=255) gcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatca > 2:3179627/1‑140 (MQ=255) gcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatca > 2:6478792/1‑140 (MQ=255) cagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGTACAATGAACcaatcaa > 1:7454123/1‑140 (MQ=255) cagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatcaa > 1:1021257/1‑140 (MQ=255) cagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatcaa > 1:6138827/1‑140 (MQ=255) agGAGAAATGGGAGGGGCTGTTTATAGCCTTTTTGGCTGACGAATTGAAGAATCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGAAAGTAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatcaat < 1:3670675/140‑1 (MQ=255) gagaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGt > 2:3309793/1‑140 (MQ=255) gagaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGt > 1:1373506/1‑140 (MQ=255) gagaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGt > 1:3464194/1‑140 (MQ=255) aaaTGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCAc < 1:6596840/140‑1 (MQ=255) aaaTGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCAc < 1:4039406/140‑1 (MQ=255) aaaTGGGAGGGGCTCATTAAAGCCTGTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCAc < 1:4307870/140‑1 (MQ=255) aGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACCATGAACCAATCAATGTCACGTCTAtt > 2:2659685/1‑140 (MQ=255) aGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGt < 2:7544041/130‑1 (MQ=255) aGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTAtt > 1:1820053/1‑140 (MQ=255) aGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTAtt > 2:309640/1‑140 (MQ=255) gggCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGc > 1:678755/1‑140 (MQ=255) ggCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCa > 1:4984774/1‑140 (MQ=255) aTTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGaaaa > 1:5857597/1‑140 (MQ=255) aTTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTGGCTTGTGTTGGGGCCCATGACCCAATCAATGTCACGTCTATTGCAGaaaa > 2:7616854/1‑140 (MQ=255) aGCCTTTTTGGCTTACGAATTTAATAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCTATTACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATAAATGTCACGTCTATTGCAGAAAAAATGa > 2:7091904/1‑140 (MQ=255) gCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGaa < 2:677944/140‑1 (MQ=255) gCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGaa < 1:5159720/140‑1 (MQ=255) gCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTAGTGCAGAAAAAATGaa < 2:2908460/140‑1 (MQ=255) ccTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCACTCAATGTCACGTCTATTGCAGAAAAAATGAAt > 2:1561837/1‑140 (MQ=255) cTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATa < 2:5377885/140‑1 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCAGGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 2:5264981/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:6992092/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:1870841/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:7566682/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTGGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:5348610/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTAGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:4680325/1‑140 (MQ=255) ttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAGCATGAACCAATCAATGTCACGTCTCTTGCAGACAATATGAATACGAc > 1:6126504/1‑140 (MQ=255) gcttaggAATTGAAGACGATCGTTGTCGAGCACGGGAGTAAATCTAATTTATCTATGACATAAATTCTTGTTTTTTTTTGTGTTGGGGAAAATGAACAAATCAATGTCAGGTTTTTTGCATAAAAAATGAATACGAaaaa < 2:3464194/134‑1 (MQ=255) tGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAg > 2:2086518/1‑140 (MQ=255) tGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAg > 2:194693/1‑140 (MQ=255) aCGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCg > 2:6179498/1‑140 (MQ=255) aCGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCg > 1:1676765/1‑140 (MQ=255) aCGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATAAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCg > 2:454862/1‑140 (MQ=255) cGAATTGAAGAAGCTCGATGTCGAGAAGGGGATAAAATCTAAATTATCGATGAATAAAATTAATGTTCTTTCTTTTTTTGGGTACAATTAACAAATAAATGTCACGTCTATTCCAGAAAAAATTAAAACGACAAACGCGa < 2:1373506/140‑1 (MQ=255) cTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAACAGCGACGGTATCGCGCAt > 2:4330137/1‑140 (MQ=255) aTGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGc > 1:1628982/1‑140 (MQ=255) gTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGcac > 1:5402071/1‑140 (MQ=255) gAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaa > 1:4414808/1‑140 (MQ=255) gAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaa > 1:2982394/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa > 1:2330973/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa > 1:1076163/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGGTCTTTCTGGTGTTGGGGACAATGAACCAATCAATGTCACGTCTCTTCCAGAAAAAATCAATACGACAAAAGCGACTGTATCGAGCATCAGCACaaaa > 2:1655281/1‑140 (MQ=255) tAAATATCAATTATCGAGTACAGAAATTCATGTTCTTTCTTGTGTGGGGGACAATGAACCAATCAATGTCACGTATTTTGCATAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGgcg < 2:5995622/140‑1 (MQ=255) aTCTAATTTATCGATTAAATAATTTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCACTGTCACTTCTATTGAAGAAAAAATTAATACGAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCgg < 2:4124222/140‑1 (MQ=255) ctcATTTCTCGAGCACACAAATACATGTTCTTTGTTGTGTTGGGCACAATGAACCAATCACTGTCACGTATATGCCACAAAAAATCAATACCCCAACCGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt < 1:1158716/140‑1 (MQ=255) ctcAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt > 1:3118860/1‑140 (MQ=255) ctcAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt > 2:5700126/1‑140 (MQ=255) tcAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGtt > 1:7124366/1‑140 (MQ=255) cAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGttt > 1:6502238/1‑140 (MQ=255) aaTTATCGATGACAGAAATTCATGTTCTTTGTTGTGTGGGGTAAAATCAACCAATCATTGTCACGTCTATTGCATAAAAAATCAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc < 2:4133910/140‑1 (MQ=255) ttATCTATGACAGAATTTCTTGTTTTTTCTTGTGTTGGGGACAATGAACCAATCATTGTCACTTATATTGCACAAAAAATCAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 1:6077762/140‑1 (MQ=255) ttATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTTTGGCAGAAAAAATGAATACGACAACAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 2:402668/140‑1 (MQ=255) ttATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 2:1870841/140‑1 (MQ=255) ttATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATAAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 2:5772990/140‑1 (MQ=255) ttATCGATGAAATAATTTCATTTTCTTTCTTGTGTTGGGGAAAATGAACCAATAAATGTAACTTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 2:5248387/140‑1 (MQ=255) ttATCGATCACACAATTTCTTTTTCTTTTTTGTGTGGGCCAAAATCAACAAATAAATGTCACGTCTATTGCATAAAAAATCAATCCCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 1:15642/140‑1 (MQ=255) tctaTGACATAAATTCATGTTCTTTATTGTGTTGGGCAAAATGAACAAATAATTTTCACGTCTATTGAAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 2:2484959/137‑1 (MQ=255) tcgagtaCATAAATTATTTTTCTTTCTTGTGTTGGGGACAATCAACCAATCAATTTCACGTATATTGCACAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 1:5675113/134‑1 (MQ=255) tCGATGACATAAATTCTTTTTCTTTGTTGTGTTGGGGAAAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATTAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 2:5518596/140‑1 (MQ=255) tCGATGACAGAATTTCTTTTTCTTTCTTGTGTTGGGGAAATTTAACAAATAATTGTCAGGTATTTGGCCAAAAAAATAAAACCGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 1:7228308/140‑1 (MQ=255) tCGATGACAGAAATTCTTGTTCTTTCTTTTGTTGGGTAAAATGAACAAATAATTGTCACGTCTATTGCACAAAAATTGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 2:1117881/140‑1 (MQ=255) tCGATGACAGAAATCCATGTTATTTCTTTTGTTGGGGACAATGACGCAATCACTGTCACTTATATTGCATAAAAAATGAAAACGACAACCGCGACTGTATCGCGCCTCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 2:1735617/140‑1 (MQ=255) tCGATCACAAAAATTCTTTTTCTTTGTTGTGTTGGGGACAATCAACCAATAAATGTCACGTCTTTTGCACAAAAAATCAATCCGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 1:6273298/140‑1 (MQ=255) ttCTTGTTCTTTCTTGTGTTGGGGACAATGAACCAATAAATGTCACGTATATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTc < 2:4984774/140‑1 (MQ=255) tttctttctTGTTTTGGGGAAAAGGAACCAATCAAGGTCACGTATCTTGCATAAAAAATGAAGCCGACACACGCGACTGTCTCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACATAACACAGCTCAGCGa < 2:3919920/139‑1 (MQ=255) tttctttctTGTTTGGGGGACAATGACCCAATCATTGTCACGTCTATTGCACAAAAAATGAAGCCGAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 1:1490401/139‑1 (MQ=255) gTTCTTTTTTGTGTGGGGGACACTTAACCAATCAATGTCAGGTCTATTGCACAAAAAATGAATACTACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 2:5822600/140‑1 (MQ=255) gTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa > 1:2531315/1‑140 (MQ=255) ttctttctTGTGTTTGGGACAATCAACCAAGCAATGTCACGTCTATTGCATAAAAAATGAACACCACAAAAGCGACTCTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGAt < 2:7659986/140‑1 (MQ=255) ttattttttGTGTTGGGGACAATCAACCAATAAATGTCACGTATATTGCATAAAAAATTAATACCAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGAt < 1:1585966/137‑1 (MQ=255) tcttGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACaa > 1:994467/1‑140 (MQ=255) ttggtttGGGGACAATTAACAAACCATTTTCACTTCTTTTCCATAAAAATTGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACaaaa < 1:2676377/135‑1 (MQ=255) gtgtGGGGCAAAATGAACCAATCATTGTCACGACTATTGCAGAAAAAATGAATACCAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAag < 1:5608573/140‑1 (MQ=255) ttttGGGCAAAATTAACAAATAATTGTCACGTATTTTGAACAAAAAATCAATACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg < 1:2488337/138‑1 (MQ=255) tgtgGGGCAAAATCAACAAATCAATGTCACGTATATTGCATAAAAATTTAATCCCAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg < 1:3309793/140‑1 (MQ=255) tgtTGGGGAAAATGAACCAATCATTGTCACGTATATTCCATAAAAAATCAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg < 1:7091904/140‑1 (MQ=255) tgtTGGGCAAAATCAACAATTCATGGTAACGTATTTTGAATAAAAAATTAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg < 1:2770733/140‑1 (MQ=255) ttGGGGACAATGAACCAATCAATGTCAGGTTTATGGCCTAAAAAATTAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAaggag < 1:7531048/140‑1 (MQ=255) ggtcaaaaTCAACAAATAAATGTAACGTCTTTTCCACAAAAAATTAATCCCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGt < 1:7059990/134‑1 (MQ=255) ggggAAAATCAACCAATAAATGTCACTTCTTTTTCACAAAAAATGAATACGAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGt < 2:5104881/140‑1 (MQ=255) gtgACAATGAACAAAACAATGTCACGTATATTGCATAAAAAATTAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTc < 2:7350509/138‑1 (MQ=255) gggACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTc > 1:4567417/1‑140 (MQ=255) gggACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTc > 1:2271911/1‑140 (MQ=255) gggACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTc > 1:2234970/1‑140 (MQ=255) aaTGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca < 2:5635934/108‑1 (MQ=255) aaTGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca > 1:5635934/1‑108 (MQ=255) aaTGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGGATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATCACAAAAAGGAGGTCTACtg > 1:3933771/1‑139 (MQ=255) aaTGAACAAATCAATGTCACGTCTTTTGCATAAAAAATGAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACtt < 1:7752949/140‑1 (MQ=255) tGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTcc > 1:942980/1‑140 (MQ=255) tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATCACAAAAAGGAGGTCTACTTCCGATTGACg > 1:5700180/1‑140 (MQ=255) tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACg > 1:6825313/1‑140 (MQ=255) | AGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGC > NZ_CP034943/1097316‑1097594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |