| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,097,474 | G→T | 15.0% | E73* (GAA→TAA) | EO946_RS05675 → | MarR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,097,474 | 0 | G | T | 15.0% | 524.7 / 9.8 | 273 | E73* (GAA→TAA) | EO946_RS05675 | MarR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (134/53); new base T (3/45); total (138/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.65e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 274 total aligned reads displayed.
CTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCA > NZ_CP034943/1097336‑1097613 | aTTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGaaaa > 1:5857597/1‑140 (MQ=255) aTTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTGGCTTGTGTTGGGGCCCATGACCCAATCAATGTCACGTCTATTGCAGaaaa > 2:7616854/1‑140 (MQ=255) ttAAAGCCTTTTTGGCTGACGACTTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGaaaaa > 1:1473194/1‑140 (MQ=255) aGCCTTTTTGGCTGACGAATTTAAGAAACTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTTTTTTGGGGACAATGAACCAATAAATGTCACGTCTATTGCAGAAAAAATGa > 2:2264147/1‑140 (MQ=255) aGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGa > 2:6085465/1‑140 (MQ=255) gCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGaa < 1:567164/140‑1 (MQ=255) gCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTAGTGCAGAAAAAATGaa < 2:2908460/140‑1 (MQ=255) cTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTGTTGTGTTGGGGACTATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATa < 2:7067837/140‑1 (MQ=255) cTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATa < 2:5377885/140‑1 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCAGGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 2:5264981/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:1870841/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:2311657/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTAGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:4680325/1‑140 (MQ=255) gcttaggAATTGAAGACGATCGTTGTCGAGCACGGGAGTAAATCTAATTTATCTATGACATAAATTCTTGTTTTTTTTTGTGTTGGGGAAAATGAACAAATCAATGTCAGGTTTTTTGCATAAAAAATGAATACGAaaaa < 2:3464194/134‑1 (MQ=255) aCGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCg > 1:1676765/1‑140 (MQ=255) gCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCa > 1:2178932/1‑140 (MQ=255) cTCGATGTCGAGGACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTTGGGACAATGAACCAATAAATGTCACGTCTATTGCATAAAAAATGAATACGACAAAAGCGCCTGTATCGAGCAt > 2:4125682/1‑140 (MQ=255) cTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCAt > 2:189803/1‑140 (MQ=255) cTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAAGCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCAt > 2:461251/1‑140 (MQ=255) tttCGAGCACGGTATAAAAAATAAATTATCCATTACAGAAATTATTTTTCTTTTTGGTTTGGGGCACATTTAACAAATCAGTGTCAGTTATATTCAATAAAAAATGAAACCCACAACCGCGACTGTATCGCGCATCAGca < 1:7010411/138‑1 (MQ=255) tGTCGCGCACGGTCTAAAACCTAAATTCTCTATCAAATAAATTCTTGTTCTTTCTTTTGTTGGGGACAATGAACCAATCATTTTCCCGTCTATGGCAGAAAAATTCAATACCACAAACGCGACTGTATCGCGCATCAGca < 1:7249618/140‑1 (MQ=255) gTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGcac > 1:7633557/1‑140 (MQ=255) gAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaa > 1:3238396/1‑140 (MQ=255) gAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaa > 1:4414808/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa > 1:1588865/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa > 1:1076163/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGGTCTTTCTGGTGTTGGGGACAATGAACCAATCAATGTCACGTCTCTTCCAGAAAAAATCAATACGACAAAAGCGACTGTATCGAGCATCAGCACaaaa > 2:1655281/1‑140 (MQ=255) gggATTAAATCTAAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAAAATGAACCAATCATTGTCACGTCTATTGCAGAAAAAATGAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCt < 2:5807354/140‑1 (MQ=255) gAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATAAGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCg > 2:1526900/1‑140 (MQ=255) ctaaaaTCTCAATTATCTATTACATAAATTAATTTTATTTATTTTTTTGGGTAAAATTAACAAATAATTTTCACGTATATTGCATAAAAAATTATTACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCgg < 2:4312429/137‑1 (MQ=255) aTCTCAATTATCGTTGACATAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCgg < 2:5760262/140‑1 (MQ=255) aTCTCAATTATCGATGACATAATTTCATGTTGTTTGTTGTGTTGGGGACAATCAACAAATCAATGTCACGTCTATTGCATAAAAAATGAATCCCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCgg < 1:7089226/140‑1 (MQ=255) ctcAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt > 2:5700126/1‑140 (MQ=255) ctcAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTAGTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt > 2:7229122/1‑140 (MQ=255) cacatttATCCATCAAACAAATTATTTTTCTTTTTTGTGTTGGGCAAAATCAACAAATCAATTTCCCTTATATGCCAAAAAAATTCAATACGACAACCGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt < 1:1158715/135‑1 (MQ=255) tcAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGtt > 1:1570217/1‑140 (MQ=255) tcAATTATCCATGCAAGAAATTATTGTTCTTTGTTGTTTGGGGCACAATCAACCAAACATTGTCACGTCTTTTGCACAAAAAATGAAACCCACAACCGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGtt < 1:6085465/140‑1 (MQ=255) aaTTATCGTTGACAGAATTTCATGTTCTTTCTTGTGTTGGGGCCAATGAACAAATCATTGTCACGTCTATTGCAGAAAAAATGAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc < 2:434330/140‑1 (MQ=255) aaTTATCGATGACAGAAATTCATGTTCTTTGTTGTGTGGGGTAAAATCAACCAATCATTGTCACGTCTATTGCATAAAAAATCAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc < 2:4133910/140‑1 (MQ=255) aaTTATCGAGGAAATAAATTAATTTTCTTTCTTGTGTTGGGGAAAATGAACCAAAAAATGTCACGTCTATTGCAGAAAAAATTAATACGAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc < 2:1820053/140‑1 (MQ=255) ttATCTATGACACAAATTCATGTTCTTTTTTGTGTTGGTCAAAATTAACAAATCAATGTAACGTATTTTGAATAAAAAATTAAAACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 1:2514254/140‑1 (MQ=255) ttATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTTTGGCAGAAAAAATGAATACGACAACAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 2:402668/140‑1 (MQ=255) ttATCGATGAAATAATTTCATTTTCTTTCTTGTGTTGGGGAAAATGAACCAATAAATGTAACTTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 2:5248387/140‑1 (MQ=255) ttATCGATCACATAAATTCTTGTTATTTATTGTGTTGGTGACAATGAACCAATAATTGTCACGTCTTTTCCATAAAAAATGAATACTACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 2:3175730/140‑1 (MQ=255) tccttcaCATAATTTCTTTTTGTTTTTTTTGTTGGGCAAATTGACCAAAAAACTGTCACGTATATTCAATAAAAAATTAATACCAAAACCGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 1:2975834/134‑1 (MQ=255) tCGATGACATAATTTAATTTTGTTTGTTTTTTTGGGGACAATCAACAAATAAATGTCAGGTATATTGCATAAAAAATCAATACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 1:6270599/140‑1 (MQ=255) tCGATGACATAAATTCTTTTTCTTTGTTGTGTTGGGGAAAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATTAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 2:5518596/140‑1 (MQ=255) tCGATGACATAAATTATTGTTTTTTGTTGTGTTGGGGACAATGAACCAATCATTGTCACTTATATTGCATAAAAAATTAATACGAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 2:2518251/140‑1 (MQ=255) tCGATCACCCAATTTCATTTTTTTTATTGTGTTGGGCACAATGACCAAAACAATGTCACGTATATTGCATAAAAAATTAAACCCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 1:5266347/140‑1 (MQ=255) cataaaTTCTTTTTCTTTCTTGTGTGGGTCAAAATCAACAAATAATTGTCAGTTTTTTTGAATAAAAAATTAATACCAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca < 1:6387955/137‑1 (MQ=255) cataaaTTATTGTTCTTTTTTGTTTTGGGAAAAATAAACAAATAAATGTCACTTATATTGCAAAAAAAATAAATACCAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca < 1:6795779/137‑1 (MQ=255) cataaaTTAATTTTATTTTTTGTGTTGGGCAAAATTAACAAAAAAATGTCACGTATATTGAACAAAAAATTAATACCCCAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca < 2:1991819/137‑1 (MQ=255) tttctttgtTGTGTTGGGGACAATGAACAAATCATTGTCACGTCTATTGCAGAAAAAATTAATACCAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 1:3688122/139‑1 (MQ=255) tttctttctTGTTTTGGGGAAAAGGAACCAATCAAGGTCACGTATCTTGCATAAAAAATGAAGCCGACACACGCGACTGTCTCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACATAACACAGCTCAGCGa < 2:3919920/139‑1 (MQ=255) tttctttctTGTGTTGGGCAAAATGAACAAATCAATGTCACGTCTCTTGCATAAAAAATCAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 1:5676569/139‑1 (MQ=255) gTTCTTTTTGTTGTTGGGTAAAATTAACAATTAATTGTCTCTTATATTCCATAAAAATTGAAAACCAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 1:5139687/140‑1 (MQ=255) gTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa > 1:6701325/1‑140 (MQ=255) gTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa > 1:5452209/1‑140 (MQ=255) gTTCTTTCTTGTGTTGGGCAAAATCAACAAATAAATGTAACGTCTTTTGCACAAAAAATTAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 1:1645044/140‑1 (MQ=255) gTTCTTTCTTGTGTTGGCCAAAATGAACAAAACAATGTAACTTCTATTGAACAAAAAATGAAAACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 2:6538255/140‑1 (MQ=255) gTTCTTTATTGTGTTGGGGACATTGAAACAATAAATGTCACGTATATTGCATAAAAAATGATTACCACAACAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 2:1073920/140‑1 (MQ=255) ttctttctTGTGTTTGGGACAATCAACCAAGCAATGTCACGTCTATTGCATAAAAAATGAACACCACAAAAGCGACTCTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGAt < 2:7659986/140‑1 (MQ=255) ttgtTGGGCACAATTAACCAATCATTGTCACGTATATTCCAGAAAAAATGAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAag < 1:5608877/139‑1 (MQ=255) ttttGGGGACATTCAACCAAAAATTTGCAGTTCTTTTCCATAAAAAATAAATACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg < 1:2264147/138‑1 (MQ=255) ttttGGGCAAAATTAACAAATAATTGTCACGTATTTTGAACAAAAAATCAATACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg < 1:2488337/138‑1 (MQ=255) tgtgGGGCACCATCAACAAATCAAGGACACGTGTTTCCCACAAAAAATCAATACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg < 1:2606869/140‑1 (MQ=255) tgtTGGGGACAATTAACAAATCAATGTCACTTATATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg < 1:5400225/140‑1 (MQ=255) tgtTGGGCACAATGAACAAATCATTGTCACTTCTATTGAACAAAAAATTAATACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg < 1:4061838/140‑1 (MQ=255) ttGGGGACAATGAACCAATCAATGTCAGGTTTATGGCCTAAAAAATTAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAaggag < 1:7531048/140‑1 (MQ=255) ggggAAAATCAACCAATAAATGTCACTTCTTTTTCACAAAAAATGAATACGAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGt < 2:5104881/140‑1 (MQ=255) ggctaCAATTAAACAATAACTGTCAGGTCTATTGAATAAAAAATTAATCATAAAACAGCGAATGTATCGAGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGt < 1:7102897/136‑1 (MQ=255) gggACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTc > 1:4567417/1‑140 (MQ=255) aaTGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca < 2:5635934/108‑1 (MQ=255) aaTGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACtt > 1:7164592/1‑140 (MQ=255) aaTGAACAAATCAATGTCACGTCTTTTGCATAAAAAATGAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACtt < 1:7752949/140‑1 (MQ=255) tGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTcc > 1:942980/1‑140 (MQ=255) tGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAAGTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGCGGGCTCCTTcc > 1:1492015/1‑140 (MQ=255) atcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCCGCGATAACAAAAAGGAGGACTACTTCCGATTGAc > 2:1323322/1‑140 (MQ=255) tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATCACAAAAAGGAGGTCTACTTCCGATTGACg > 1:5700180/1‑140 (MQ=255) tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACg > 1:2796466/1‑140 (MQ=255) tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACg > 1:6586146/1‑140 (MQ=255) tcaatCTCACGTCTATTGCATAAAAAATGAATACGACAAAAGCGACGGAATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACg > 1:1356763/1‑140 (MQ=255) tGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACgccgg > 1:2399133/1‑140 (MQ=255) tGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACgccgg > 1:1862271/1‑140 (MQ=255) tGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACgccgg > 1:4278779/1‑140 (MQ=255) cGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCggg > 1:3451349/1‑140 (MQ=255) cGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCggg > 1:3997092/1‑140 (MQ=255) cGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCggg > 1:3337245/1‑140 (MQ=255) cGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCggg > 1:6155176/1‑140 (MQ=255) cGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCggg > 1:3008792/1‑140 (MQ=255) cGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGACggg > 2:1698090/1‑140 (MQ=255) cGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGACGTCTACTTCCGATTGACGCCGGCCggg > 2:6389293/1‑140 (MQ=255) ttatATTGAATAAAAAATTAATACGAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGa < 2:746875/137‑1 (MQ=255) gtcaagggCAGAAAAAATCAAGACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGa < 1:2742759/133‑1 (MQ=255) gtatATTGAATAAAAAATGAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGa < 1:7349140/137‑1 (MQ=255) gacTATTGCAGAAAAAATTAATACGACAACAGCGACTGTATCGCGCATCAGCACACAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGa < 2:577781/138‑1 (MQ=255) aTTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGaaaaa > 2:585389/1‑140 (MQ=255) aTTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGaaaaa > 2:7420395/1‑140 (MQ=255) tGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAAc > 1:7371936/1‑140 (MQ=255) gAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGca > 1:6935572/1‑140 (MQ=255) | CTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCA > NZ_CP034943/1097336‑1097613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |