| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,279,924 | C→A | 5.9% | I50I (ATC→ATA) | EO946_RS06645 → | altronate dehydratase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,279,924 | 0 | C | A | 5.9% | 1348.7 / 8.8 | 564 | I50I (ATC→ATA) | EO946_RS06645 | altronate dehydratase family protein |
| Reads supporting (aligned to +/- strand): ref base C (215/289); new base A (2/58); total (217/347) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.08e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 567 total aligned reads displayed.
GTATAAAGATTCATAAACAAGATAATGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATACAGCTATACACCGAGAT > NZ_CP034943/1279785‑1280063 | taAAGATTCATAAACAAGATAATGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGGGGCCACAAGATTGCGCTTCAGCCTATCaaa > 1:2545300/1‑140 (MQ=255) taAAGATTCATAAACAAGATAATGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCaaa < 2:5878407/140‑1 (MQ=255) aaGATTCATAAACAAGATAATGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCaaata > 2:1913069/1‑138 (MQ=255) cATAAACAATATAATGTCCTTCTTGCTCTGCTAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGa < 2:1052516/140‑1 (MQ=255) cATAAACAAGATAATGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGGGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGa < 2:2545300/140‑1 (MQ=255) cATAAACAAGATAATGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGa > 2:5927964/1‑140 (MQ=255) aaCAAGATAATGTCCTTGTTGCGCGCCGAGATATCGAGAAAGGAGAGCGCCTGAATGCGGATGGCTTGTCGATTGACGTCAAGGATGATATAAAAAGAGGCCAAAACATGGCGGTTCAGCCTATCAAAGAAAACGACAGc < 1:6045728/140‑1 (MQ=255) aaCAAGATAATGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGAATGTCGATTGAAGTCAAGGTTGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGc < 2:6650010/140‑1 (MQ=255) aaGATAATGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGcatc > 2:2791412/1‑140 (MQ=255) tgATATTGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAACGAAAACGACAGcatca < 2:5468433/139‑1 (MQ=255) aGATAATGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGACTGCGGAGGGCATGTCGATTTAAGTAAAGGATGATATAAAAAGAGGCCACAAGTTTGCGGTTCAGCATATCAAAGAACACGACAGcatca < 2:3927683/140‑1 (MQ=255) tGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATCTAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAAt > 1:1061656/1‑140 (MQ=255) tGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCCGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGCTTGCGCTTCAGCCTAGCAACGAAAACGACAGCATCATCAAAt > 2:4595728/1‑140 (MQ=255) tCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATAc > 2:3561576/1‑140 (MQ=255) ttcttGCTCTGCGAGATATCGAGAAAGTAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACggg > 2:1495317/1‑140 (MQ=255) tcttGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGt > 1:3350560/1‑140 (MQ=255) cttGCTCTGCGAGATATCGAGAAAGGAGTGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGtt > 2:6902696/1‑140 (MQ=255) ttGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGACTGCGGATGGCATGTCGATTGAAGTCAAGTATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGttt < 2:3192900/140‑1 (MQ=255) ttGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCACGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGttt < 2:493633/140‑1 (MQ=255) ttGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATTATATAAAAAGAGGCCACAAGATTGCGCTTCAGCATATCAAAGAAAACGACAGCATCATCAAATACGGGttt < 2:2475380/140‑1 (MQ=255) tGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATc > 2:5777188/1‑140 (MQ=255) tGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATc > 1:6959458/1‑140 (MQ=255) tGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATc > 2:3267473/1‑140 (MQ=255) cGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTGTCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCgg > 1:4414787/1‑140 (MQ=255) atatatCGAGAAAGGAGAGCGGCTGAATGCGGAGGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGCCCACAAGTTGGCGCTTCAGCCTATCAAACAACACGACAGCATCATCAAATACGGGTTTCCAATCGGgc < 1:569386/138‑1 (MQ=255) gaTATCGAGAAAGGACAGCTGCTGAATGCGGATGGAATGTCTATTGAATTCAAGTATGATATAAAAAGAGGCCAAAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGgca < 2:7249189/140‑1 (MQ=255) tatCTAGAAAGGAGAGCGGCTGATTGGGTATGGCATTTCGTTTGAAGTCAAGGATGTTATAAAAAGAGGCCACAAGTTTGCGCTTCAGCCTATAAAACAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGgcatg < 1:7348491/140‑1 (MQ=255) tatCGAGAATGGAGAGGGGCTGATTGCGTATGGCTTGTCTATTGATTTAATGGATGTTATAAAAAGTGGCCACAAGTTTGCGCTTCAGCCTATAAAACAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGgcatg < 1:803610/140‑1 (MQ=255) tatCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGTATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGgcatg < 2:1306885/140‑1 (MQ=255) tatCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAATAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGtcatg > 2:7370568/1‑140 (MQ=255) tatCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGgcatg < 2:798685/140‑1 (MQ=255) atCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGgcatgc > 2:6085166/1‑140 (MQ=255) cGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGgcatgcat > 2:5645058/1‑140 (MQ=255) gagaACGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTACAGCCTCTCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATc < 1:1682386/140‑1 (MQ=255) gagaAAGGAGAGCGGCTGAATGCGGATGGCATGTCTATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGGTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATc < 2:5025787/140‑1 (MQ=255) agaAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATca < 2:4635068/140‑1 (MQ=255) agaAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATca < 1:7538614/140‑1 (MQ=255) agaAAGGAGAGCGGCTGAATGAGTATTTAAATTAGATTGAAGTCAACGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCAAATAGGGCATGCATca > 2:74758/1‑140 (MQ=255) aaaGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATcaca < 2:4503270/140‑1 (MQ=255) cGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCACTCGGGCATGCATCACAAGATATatc > 1:466868/1‑140 (MQ=255) cGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATatc > 1:6272178/1‑140 (MQ=255) aTGGGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGga < 2:5539980/140‑1 (MQ=255) aTGCGGTTGGAATTTCGTTTGAAGTCAAGTATGATATAAAAAGAGGCAACAAGTTTGAGCTTCAGCCTATCAAAGAAAACGACAGCCTCATCAACTACGGGTTTACAAGCGGGCATGCATCACAAGATATATCGATCGga < 2:5198100/140‑1 (MQ=255) aTGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGga < 2:5269697/140‑1 (MQ=255) aTGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGga < 2:4797191/140‑1 (MQ=255) aTGCGCATGCCATGTCCATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAACACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGga < 1:2269156/140‑1 (MQ=255) ggATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGc < 2:4189906/140‑1 (MQ=255) aTGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCat > 1:6745125/1‑140 (MQ=255) aTGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCat > 2:4298420/1‑140 (MQ=255) gCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTACAGCCTATCAAACAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATAtt < 1:6445403/140‑1 (MQ=255) tGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCGTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCAt < 2:3831725/140‑1 (MQ=255) ttGAAGTAAAGTATTATATAAAAAGAGGCCAAAAGATTGCGCTTAAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCat < 1:2643742/140‑1 (MQ=255) tGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCata > 2:2344840/1‑140 (MQ=255) ctCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATAc < 1:4595564/139‑1 (MQ=255) tCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACa > 2:6065609/1‑140 (MQ=255) atgatATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAaaaca < 2:7002747/140‑1 (MQ=255) tgatATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAAAACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAaaacaa > 1:3379140/1‑140 (MQ=255) tatatAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAaaacaaa < 2:4050191/139‑1 (MQ=255) atatAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGagag > 1:3695808/1‑110 (MQ=255) tataAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAAcc > 1:2147713/1‑140 (MQ=255) aaaGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACTGGTTTCCAATCGGGCATGCATCACAAGATCTATCGATCGGAGAGCCTATTCATGTCCATCATACAAAAACAAACCTGTCt > 1:4946740/1‑140 (MQ=255) aaaGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCt > 1:3202346/1‑140 (MQ=255) aaaGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCt > 1:6572721/1‑140 (MQ=255) agGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGata < 2:3379140/140‑1 (MQ=255) ggCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGatat > 2:6194382/1‑140 (MQ=255) gCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATc > 1:5296479/1‑140 (MQ=255) ccACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATcc < 2:3674253/140‑1 (MQ=255) ccACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATcc < 1:2344840/140‑1 (MQ=255) ccACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATcc < 1:1895126/140‑1 (MQ=255) acaAGATTGCGCTTCAGCCTATAAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCaa < 1:2078810/140‑1 (MQ=255) atatggcgcTTCAGCCTCTCAAAGAAAACGACAGCATCATCAAAGACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACa < 1:4072554/135‑1 (MQ=255) agtttGCGCTTCAGCCTATAAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACa < 1:2832847/137‑1 (MQ=255) aGATTGCGCTTCAGCCTATCAAATAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACa < 2:296349/140‑1 (MQ=255) aGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACa < 1:3093564/140‑1 (MQ=255) aGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACa < 2:5091595/140‑1 (MQ=255) aGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACa < 2:6283319/140‑1 (MQ=255) aGATTGCGCTTCAGACTATAAAATAACACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACa < 1:1836579/140‑1 (MQ=255) aGATTGCGATTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACa < 2:6505770/140‑1 (MQ=255) aGATGGCGCTTCAGCCTATAAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACa < 1:1236578/140‑1 (MQ=255) aTTGCGTTTCAGACTATAAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATa < 1:5923588/140‑1 (MQ=255) aTTGCGGTTCAGCCTATCAAAGAAAAAGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATa < 1:3861632/140‑1 (MQ=255) aTTGCGCTTCAGCCTATCAATTAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATa < 2:640618/140‑1 (MQ=255) aTTGCGCTTCAGCCTATCAAAGAACACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATa < 1:3500937/140‑1 (MQ=255) aTTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAACCCTGTCTGATATCCAAACATa < 2:672138/140‑1 (MQ=255) aTTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACCTa < 2:1728466/140‑1 (MQ=255) aTTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATa < 1:1502173/140‑1 (MQ=255) aTTGCGCTTCAGCCTATAAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATa < 1:7662027/140‑1 (MQ=255) aTTGCGCTTCAGCCTATAAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATa < 1:4170069/140‑1 (MQ=255) aTTGCGCTTCAGCCTATAAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATa < 2:7600061/140‑1 (MQ=255) aTTGCGCTTCAGCATATAAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATa < 1:5498399/140‑1 (MQ=255) tGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGa < 2:1832991/126‑1 (MQ=255) cgcTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATACAGc > 1:5124360/1‑140 (MQ=255) cgcTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATACAGc > 1:483459/1‑140 (MQ=255) gcTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATAACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATACAGCt > 2:5979606/1‑140 (MQ=255) gcTTAAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATACAGCt < 1:6085166/140‑1 (MQ=255) ttCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATACAGCtat > 1:5072680/1‑140 (MQ=255) cAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGga < 1:3244033/78‑1 (MQ=255) tATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATACAGCTATACACCga > 2:2641615/1‑140 (MQ=255) tATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATACAGCTATACACCga > 2:3096293/1‑140 (MQ=255) tCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATACAGCTATACACCgaga > 2:916050/1‑140 (MQ=255) | GTATAAAGATTCATAAACAAGATAATGTCCTTCTTGCTCTGCGAGATATCGAGAAAGGAGAGCGGCTGAATGCGGATGGCATGTCGATTGAAGTCAAGGATGATATAAAAAGAGGCCACAAGATTGCGCTTCAGCCTATCAAAGAAAACGACAGCATCATCAAATACGGGTTTCCAATCGGGCATGCATCACAAGATATATCGATCGGAGAGCATATTCATGTCCATAATACAAAAACAAACCTGTCTGATATCCAAACATACAGCTATACACCGAGAT > NZ_CP034943/1279785‑1280063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |