| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,582,926 | C→A | 5.7% | I39I (ATC→ATA) | ylyA → | sporulation‑related RNA polymerase‑binding protein YlyA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,582,926 | 0 | C | A | 5.7% | 964.7 / 2.2 | 383 | I39I (ATC→ATA) | ylyA | sporulation‑related RNA polymerase‑binding protein YlyA |
| Reads supporting (aligned to +/- strand): ref base C (209/134); new base A (2/37); total (211/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.14e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 408 total aligned reads displayed.
TAAGAGCAGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCAAAGCTTG > NZ_CP034943/1582789‑1583065 | aGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATaaa > 2:6302638/1‑140 (MQ=255) aGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATaaa > 2:6109306/1‑140 (MQ=255) aGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATaaa > 1:1940769/1‑140 (MQ=255) ggAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAAc > 2:5351864/1‑140 (MQ=255) gAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCTAGCAGCACTCAATCATAAACa > 1:6035427/1‑140 (MQ=255) gAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACa < 2:7704600/140‑1 (MQ=255) gAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACa > 1:5736387/1‑140 (MQ=255) gAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACa > 2:3563892/1‑140 (MQ=255) gtgATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCGACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAg > 1:2279336/1‑140 (MQ=255) gtgATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAg > 2:708309/1‑140 (MQ=255) gtgATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAg > 2:5117960/1‑140 (MQ=255) gtgATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAg > 2:1322945/1‑140 (MQ=255) aatgaatgaTCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCACGCAGCAATCAATCATAAACAAAAAGCAActc > 1:4817297/1‑140 (MQ=255) tgaatgaTCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTg > 2:3412548/1‑140 (MQ=255) tgaatgaTCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTg > 2:3857391/1‑140 (MQ=255) tgaatgaTCAACTGACCGCAATATATACGGAACATCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTg > 2:1205047/1‑140 (MQ=255) ataaaCTGACCGAAATATATACGCAACTTATTCTCACGAAAGAACAATTACAGTGGATTTTATTTTATTTTTCTTGCTTTCAGGCTTCAACACGCCCGCAAGCAGCAATCAATCAAAAACAAAAAGCAACTCTGATCTAt < 1:3272376/137‑1 (MQ=255) aacAACTCACCGAAATATATACGGAACTTCTTCTGACGAAACAATAATTACAGGCGATATTTTTTGAGTATTCTGGCTTTCAGGATTCAACACCCCCGCAAGCAGCAAACAATAAAAAACAAAACGCAACTCTGATCTAt < 1:6326336/138‑1 (MQ=255) aTCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTAt > 2:1900255/1‑140 (MQ=255) aTCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTAt < 2:5760561/140‑1 (MQ=255) aCTGACAGCAATATATCCGGAACTTCTTCTGACTAAAGAAGAATTACAGTCGATATTTTTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATcaca < 2:2625304/140‑1 (MQ=255) aCCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTaa > 2:3598231/1‑140 (MQ=255) aCCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTaa > 2:2241256/1‑140 (MQ=255) aCCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTaa > 2:4410421/1‑140 (MQ=255) aCCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTaa > 1:1254835/1‑140 (MQ=255) cGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCACGCAGAAATCAATCATAAACAAAAATCAACTCTGATCTATCACAGTaaat > 1:4030421/1‑139 (MQ=255) cGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaag < 2:459627/140‑1 (MQ=255) cGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaag > 1:6075827/1‑140 (MQ=255) aaaaatataCTTAACTTATTCTGACTAAATAATAATTACTGTCTAGTTTTTTTTATTTTTCTTTATTTCTGGCTTAAACAAGCCCGCAAGAAGAAATAAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaagaa < 1:7153768/136‑1 (MQ=255) aaaTATATACGTAACTTATTCTGACTAAAGAATAATTACAGTCGTTATTATTTGAGTATTCTTGCTTTCAGGATTCAACACGCCCGCAAGCAGAAAACAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaagaa < 1:1295047/139‑1 (MQ=255) aaTATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaagaag > 2:159359/1‑140 (MQ=255) ataCGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCtt > 1:4312241/1‑140 (MQ=255) ataCGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCtt > 2:1746545/1‑140 (MQ=255) ataCGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCtt > 1:6739637/1‑140 (MQ=255) aCGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCa > 1:6999852/1‑140 (MQ=255) tcaaCTTCTTCTGACTAAATAATAATTACAGTCGATATTTTTTGATTATTCTTGCTTTCTGGCTTCAACACGCCCGCAAGCAGAAAGCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAg < 1:4618517/138‑1 (MQ=255) gtaaCTTCTTCTGACTAAAGAATAATTACAGTCGAGATTTTTTGAGTATTCTTGCTTTCAGGCTTAAACAAGCCCGCAACCAGCAATAAATAATAAAAAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAg < 1:1623699/138‑1 (MQ=255) ggAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAg > 1:1529119/1‑140 (MQ=255) ggAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAg > 1:7510158/1‑140 (MQ=255) gAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTAt > 1:5335029/1‑117 (MQ=255) gAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGa > 2:6658598/1‑140 (MQ=255) gAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGa > 2:4130677/1‑140 (MQ=255) gAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGa > 2:6817428/1‑140 (MQ=255) gAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGa > 2:729826/1‑140 (MQ=255) actactTCTGACGAAAGAATAATTACAGGCGAGATTATTTGAGTATTCTTGCTTTCAGCCTTAAACAAGCCCGCAAGCAGCAATCACACATAAACAAACAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACg < 1:3576123/140‑1 (MQ=255) aCTTCTTCTTACGAAATAATAATTAAAGTCGAGATTTTTTGAGTATTCTTGCTTTCAGGATTCAACAAGCCCGCAAGCAGAAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACg < 2:3180871/140‑1 (MQ=255) aCTTCTTCTGACGAAATATGACTTACAGTCTATATTATGTGCTTATTCTTGGTTTCAGGCTGCAACACCCCCGCACGAACCAATCAATCATAACCAAACCGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACg < 1:494859/140‑1 (MQ=255) cttcttCTGACTAAATAATAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGt < 2:4020327/140‑1 (MQ=255) cttcttCTGACTAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCACGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGt < 2:2953765/140‑1 (MQ=255) cttcttCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGAGGt > 2:6890030/1‑140 (MQ=255) attcttcTGACTAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACACGCCCGCAAGCTGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGt < 2:5570708/139‑1 (MQ=255) ttcttcTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCAt > 2:7660142/1‑89 (MQ=255) ttcttcTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAATGAAGAGCTTCAAGACGtt > 1:3749219/1‑140 (MQ=255) ttcttcTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGtt > 2:3454096/1‑140 (MQ=255) ttcttcTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGtt > 2:904954/1‑140 (MQ=255) ttcttcTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGtt > 2:1525821/1‑140 (MQ=255) ttcttcTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATAATAAACAAAAAGCAACTCTGATCTAACACATTAAATAAGATCTTCAACACGtt > 2:938154/1‑140 (MQ=255) ttcttcTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAAACATAAACAAAAAGCAACTCTGATCAATCACAGTAAAGAAGAGCTTCAAGACGtt > 2:7486299/1‑140 (MQ=255) gACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCg > 2:5297006/1‑140 (MQ=255) ctaaaTAATAATTACATTCGATATTTTTTTATTATTATTGCTTTCAGGATTCAACAACCCCGCAACCAGCAAACAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCa < 1:4570157/138‑1 (MQ=255) ctaaaTAAGAATTACAGTCTAGATTATTTTATTATTGTTGCTTTCAGGCTAAAACAACCCCGCAAGAAGAAATCAATAAAAAACAAAACGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCa < 1:5931848/138‑1 (MQ=255) ctaaaGACGAATTACAGTCGATATTATTTGATTATTCTTGCTTTCTGGCTACAACACGCCCGCAAGCAGCAATAAATAATAAACAAAACGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCa < 1:3505643/138‑1 (MQ=255) cGAAATAACAATTACAGTCGATATTATTTGAGTATTCTTGCTTTAAGGCTTCAACAAGCCCGCACCCACCAATAAATCATAAAAAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCa < 1:3429190/140‑1 (MQ=255) aagaagAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTg > 1:1800349/1‑140 (MQ=255) agaagaATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGt > 2:5477643/1‑140 (MQ=255) aaTTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCaaa > 2:2053449/1‑140 (MQ=255) gTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaagaa > 1:5827059/1‑100 (MQ=255) gTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGaaa > 2:1053085/1‑140 (MQ=255) gagaTTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACg > 1:5540181/1‑140 (MQ=255) gagaTTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACg > 2:144703/1‑140 (MQ=255) gagaTTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACg > 2:802696/1‑140 (MQ=255) gagaTTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATAGAAAACg > 2:5975230/1‑140 (MQ=255) tgaTTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACgg < 2:784357/139‑1 (MQ=255) agtttattTGATTATTCTTGCTTTCAGGCTTAAAAACGCCCGCAAGCAGCAATAAATCATAAACAAAACGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACgg < 1:2648522/137‑1 (MQ=255) tttattTGATTATTTTTGTTTTGTTTGTTAAACAAGCCCTCAAACAGCAATTAATTAAAAACAAAAAGCAACTCTTATCTATCACATTAAAGAAGAGCTTCATGACGTTCTCCTCGCATTGTCCAAAATCGATAACGGTa < 1:84992/139‑1 (MQ=255) atttttTTAGTATTCTTTTTTTCAGGCTTAAACAAGCCCTAAATCAGAAATCATTTATAAACATAAAGCAACTCTTATCTATCACATTAAAGAAGAGCTTCAATACGTTTTTCTATAATTTTCCTAATTCGAAAAGGGTa < 2:5665836/140‑1 (MQ=255) attattTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTa < 2:7413580/140‑1 (MQ=255) attattTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTa < 2:4344496/140‑1 (MQ=255) attattTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTa < 2:1257674/140‑1 (MQ=255) tattTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACa < 2:4982252/140‑1 (MQ=255) gAGTATTCTTTCTTTCAGGCTTCAACAACCCCGCAAGCAGAAAACACACATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCgg < 2:4879281/140‑1 (MQ=255) tttCTTGCTTTCTGGATTCAACAAGCCCGCAAGCAGCAATCAATCATAAAAAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATAc < 1:1100819/139‑1 (MQ=255) tGCTTTCAGGATACAACAAGCCCGCAAGCAGCAATCAATAATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCga < 1:7213458/140‑1 (MQ=255) tGCTTACAGGCTTCAACACGCCCGCACGCACCAATAAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCga < 1:778677/140‑1 (MQ=255) gCTTTCAGGCTACAACAAGCCCGCAAGCAGCAAACAACAAAAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCgaa < 1:3905970/140‑1 (MQ=255) agtcTTCACCACGCCCGCACGCTGCAATCAATCATAAACAAACAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACt < 1:1990997/137‑1 (MQ=255) gCTTCAACAAGCCCGCAAGCAGAAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTgg < 2:6509999/140‑1 (MQ=255) ttaaacaaGCCCGCAAGCAGAAATAAATAATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTgggg < 1:1340169/137‑1 (MQ=255) ttCAACACGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTgggg < 1:3333330/140‑1 (MQ=255) ttCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTgggg < 1:7618420/140‑1 (MQ=255) tacaaccaGCCCGCAACCAGCAATCAAACAAAAAAAAAACGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTgggg < 1:6792766/138‑1 (MQ=255) gCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCAtt > 1:2486534/1‑140 (MQ=255) gCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCAtt > 1:297101/1‑140 (MQ=255) gCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCAtt > 2:2369731/1‑140 (MQ=255) ccGCAAGCAGCAAACAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTcc < 1:6600901/140‑1 (MQ=255) cAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCt > 1:2541873/1‑140 (MQ=255) cAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCt > 1:3054389/1‑140 (MQ=255) cAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCt > 1:1731696/1‑140 (MQ=255) gcagcaATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTc < 1:904954/140‑1 (MQ=255) tcaatcaTAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCAAAGCtt > 1:5203835/1‑140 (MQ=255) | TAAGAGCAGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCAAAGCTTG > NZ_CP034943/1582789‑1583065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |