| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,669,737 | C→T | 100% | Q88* (CAG→TAG) | fliM → | flagellar motor switch protein FliM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,669,737 | 0 | C | T | 100.0% | 981.0 / ‑6.6 | 275 | Q88* (CAG→TAG) | fliM | flagellar motor switch protein FliM |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (147/126); minor base G (1/0); total (148/127) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 275 total aligned reads displayed.
TCAAACGTGCGCTGCGGTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACCAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCATATACGATGATGGATCGGGTA > NZ_CP034943/1669600‑1669871 | tCAAACGTGCGCTGCGGTTGTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCAGATATCTGTCAGCTCTGTTGACTAg > 2:250591/1‑140 (MQ=255) cAAACGTGCGCTGCGGTTTTCCAAGGATCAGATCCGCAGTCTAACGAGACTTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAgg > 1:2608403/1‑140 (MQ=255) aaaCGTGCGCTGCGGTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGt < 1:6778905/140‑1 (MQ=255) aaaCGTGCGCTGCGGTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGt < 2:6783345/140‑1 (MQ=255) cGTGCGCTGCGGTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTccc < 2:4008484/140‑1 (MQ=255) cgcTGCGGTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGt < 2:7446431/133‑1 (MQ=255) gcTGCGGTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATg < 1:4468579/140‑1 (MQ=255) gcTGCGGTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATg < 1:80070/140‑1 (MQ=255) cTGCGGTTTTCCATGGATCAGATACGCAGTCTAACGATAATTCATGACAATTTTGCAAGACTTCTTACTAATCACTTTTCTGCTCAGCTCCGGACCTATATTCTCATATCTGTAAGCTCTGTTGAGTAGGTGCCTTATgt > 2:1651385/1‑139 (MQ=255) ggTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGaa < 1:4054156/140‑1 (MQ=255) ggTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGaa < 2:3444960/140‑1 (MQ=255) ggTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGaa < 1:6192525/140‑1 (MQ=255) ggTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGaa < 1:3083815/140‑1 (MQ=255) ttCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATGTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTCGGTCCCTTATGAGGAATTTa > 2:3101880/1‑140 (MQ=255) tCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTAt < 2:2856752/140‑1 (MQ=255) ggATCATATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGat < 2:3150400/140‑1 (MQ=255) ggATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGat < 2:424396/140‑1 (MQ=255) ggATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGat < 1:5100504/140‑1 (MQ=255) aGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGatccatc < 2:3695120/140‑1 (MQ=255) cAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACa > 1:7082741/1‑140 (MQ=255) tAACGAGAATTCATGACAATTTTGCAAGAGTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACg > 1:2148609/1‑140 (MQ=255) cGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGAtt > 1:3589461/1‑140 (MQ=255) cGAGAATTCATGACAATTTTGCAAGACTTCTTACGACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGACTTTATCAGATCCATCCCGAACATGACGAtt > 1:5547968/1‑140 (MQ=255) aatCATGACAATTTTGCAAGACTTCTGACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTAGGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGaa > 1:1396402/3‑140 (MQ=255) aTTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGaa > 2:7620726/1‑140 (MQ=255) aTTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGaa > 1:6749416/1‑140 (MQ=255) aTTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGaa > 1:6623232/1‑140 (MQ=255) aTTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGaa > 1:6546070/1‑140 (MQ=255) aTTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGaa > 1:3197853/1‑140 (MQ=255) aTTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGaa > 1:4249747/1‑140 (MQ=255) aTTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGaa > 2:7061411/1‑140 (MQ=255) aTTCATGAAAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATACACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCAATCCCGAACATGACGATTTTGaa > 1:4600545/1‑140 (MQ=255) ttCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAAt < 1:6037782/140‑1 (MQ=255) tCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTCTCAGCTCTGTTGACTAGGTCCCTTATGAGGAAATTATCAGATCCATCCCGAACATGACGATATTGAATc < 1:6958026/140‑1 (MQ=255) gACAATTTTGCAAGACTTCTTACTAGTCACTGTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCGTTATGAGGAATTTATCAGATCCATCCCGAACATGACGTGTTTGAATCTGtt > 1:1104385/1‑140 (MQ=255) gACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGtt > 1:6438364/1‑140 (MQ=255) aaTTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGa > 1:6345909/1‑140 (MQ=255) aaGCCTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATc < 1:3754812/140‑1 (MQ=255) aCTTCTTACTACTCAGTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGa < 2:5615835/140‑1 (MQ=255) ttcttACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATg < 1:5011546/140‑1 (MQ=255) cttACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATAGa > 1:4532096/1‑140 (MQ=255) actactCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAgg < 1:162877/140‑1 (MQ=255) actactCACTTGTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAgg < 1:2884521/140‑1 (MQ=255) tactCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTa < 1:1730371/140‑1 (MQ=255) cACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGAt < 2:1266022/140‑1 (MQ=255) cACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGAt < 1:1440666/140‑1 (MQ=255) cACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGAt < 2:4974975/140‑1 (MQ=255) aCTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGAtt > 1:2693599/1‑140 (MQ=255) cTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTa > 2:3198156/1‑140 (MQ=255) ttttCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTat > 2:1557961/1‑140 (MQ=255) ttttCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCAATCCTATGGAAGGTAGGATTat > 1:734040/1‑140 (MQ=255) tCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTatgat < 2:4939689/140‑1 (MQ=255) tCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTatgat < 1:3301922/140‑1 (MQ=255) tCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTatgat > 2:6184865/1‑140 (MQ=255) cTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTatgatg < 1:6040231/140‑1 (MQ=255) atGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTatgatg < 1:2325294/139‑1 (MQ=255) tGCTCAGCTCAGGACCTATATTCACATATCTGTAAGCTCTGTTGACTAGGTCGCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATgg > 2:6571691/1‑140 (MQ=255) ctcagctcagGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAg > 2:154957/1‑140 (MQ=255) agatcagGACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGtt < 2:4901849/137‑1 (MQ=255) ctcagGACCTATATTCACATAGCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGACTTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTGCATCCGAGGGAAGGTAGGAGTCTGATGGAGGTTaa > 2:1102687/1‑140 (MQ=255) gACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCGTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGCAGGTAGGATTCTGATGGCGGTTAACCCGa > 2:2146078/1‑140 (MQ=255) gACCTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGa > 2:5926449/1‑140 (MQ=255) gACCTATAGTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGAGTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGa < 2:5095383/140‑1 (MQ=255) ccTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACa < 1:5474076/140‑1 (MQ=255) cTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACaa < 2:3740068/140‑1 (MQ=255) cTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACaa > 1:3683317/1‑140 (MQ=255) cTATATTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACaa < 2:6388650/140‑1 (MQ=255) tataTTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAAt < 1:3462046/140‑1 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCGCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGa > 1:6247983/1‑102 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAgg < 2:782492/109‑1 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGTGTAGGATGGAGGTTAACCCGACAAtt > 2:3047004/1‑140 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAAtt > 1:1065959/1‑140 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAAtt > 1:207904/1‑140 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAAtt > 2:3904671/1‑140 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAAtt > 1:2551258/1‑140 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAAtt > 1:4072771/1‑140 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAAtt > 2:6009338/1‑140 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAAtt > 1:4508660/1‑140 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAAtt > 1:7545082/1‑140 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCTGATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACaaag > 2:5801999/1‑138 (MQ=255) atatTCACATATCTGTCAGCTCTGTTGACTAGGTCCCGTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAAtt > 1:880773/1‑140 (MQ=255) ttCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCa < 2:3550370/140‑1 (MQ=255) ttCACATATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCa < 2:2208130/140‑1 (MQ=255) cacaTATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCata < 2:5714750/140‑1 (MQ=255) cacaTATCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCata < 2:54532/140‑1 (MQ=255) atatCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGTTGGAGGTTAACCCGACAATTGCATATAc > 1:1891495/1‑140 (MQ=255) atatCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCATATAc > 1:4729598/1‑140 (MQ=255) atatCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCATATAc > 1:1000246/1‑140 (MQ=255) tCTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGAGGGAGGTTAACCCGACAATTGCATATACgat > 2:7715971/1‑140 (MQ=255) cTGTCAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCATATACgatg < 1:2942267/140‑1 (MQ=255) tCAGCTCTTTTGACTAGGTCACTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATc < 1:875545/69‑1 (MQ=255) cAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCATATACGATGATgg > 2:1042305/1‑140 (MQ=255) cAGCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAAAATGACGATTTTGAATCTGTTTGACGTCCATCCGATCGAAGGTAGGAGTATGATGGAGGTTAAACCGACAATTGCATATACGATGATgg > 2:4523678/1‑140 (MQ=255) cAGCTCTGTTGACTAGGTCCCTTAGGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCATATACGATGATgg > 2:7148964/1‑140 (MQ=255) gCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCATATACGATGATGGAt > 2:2275027/1‑140 (MQ=255) gCTCTGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACAATACAATTGCATATACGATGATGGAt < 2:1726820/140‑1 (MQ=255) tGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGa > 2:3882609/1‑84 (MQ=255) tGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCata > 2:2077661/1‑123 (MQ=255) tGTTGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCATATACGATGATGGATCggg > 1:3543737/1‑140 (MQ=255) ttGACTAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCATATACGATGATGGATCGGGTa < 2:6524936/140‑1 (MQ=255) | TCAAACGTGCGCTGCGGTTTTCCAAGGATCAGATCCGCAGTCTAACGAGAATTCATGACAATTTTGCAAGACTTCTTACTACTCACTTTTCTGCTCAGCTCAGGACCTATATTCACATATCTGTCAGCTCTGTTGACCAGGTCCCTTATGAGGAATTTATCAGATCCATCCCGAACATGACGATTTTGAATCTGTTTGACGTCCATCCGATGGAAGGTAGGATTATGATGGAGGTTAACCCGACAATTGCATATACGATGATGGATCGGGTA > NZ_CP034943/1669600‑1669871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |