| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,103,774 | C→A | 12.5% | V4L (GTA→TTA) | azoJ ← | FMN‑dependent NADH‑azoreductase AzoJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,103,774 | 0 | C | A | 12.5% | 442.4 / 12.7 | 192 | V4L (GTA→TTA) | azoJ | FMN‑dependent NADH‑azoreductase AzoJ |
| Reads supporting (aligned to +/- strand): ref base C (39/119); new base A (30/3); total (70/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.39e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 195 total aligned reads displayed.
AAGGTTCTCTTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTAATATC > NZ_CP034943/2103637‑2103913 | aaggTTCTCTTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTg < 1:4773395/140‑1 (MQ=255)aaggTTCTCTTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTg < 1:440572/140‑1 (MQ=255) ggTTCTCTTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTa < 2:6648513/140‑1 (MQ=255) ggTTCTCTTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTa < 2:305574/140‑1 (MQ=255) ggTTCTCTTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTa < 1:3454840/140‑1 (MQ=255) ggTTCTCTTTATGAAGATCTAATTCAACCAATTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTa < 1:5018602/140‑1 (MQ=255) ggTTCTCGTTATGAAGATCTAATTCAACCACTTCATCCGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGATGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTa < 1:6468086/140‑1 (MQ=255) ggTTCTATTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTa < 1:7515543/140‑1 (MQ=255) ttCTCTTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGa < 1:1662191/140‑1 (MQ=255) ttCTCTTTATGAAGATCTAATTCAACCACGTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGa < 2:1661931/140‑1 (MQ=255) ttCTCTTTATGAAGATCGAATTCCACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGa < 2:6686423/140‑1 (MQ=255) tctcTTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGAc > 2:5837568/1‑140 (MQ=255) tctcTTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATAATGTAGaa > 2:4858801/1‑139 (MQ=255) actctTTATGAAGATCAAATACAACAACTCAATCAGCACCGTTATTTTCATTATAAGAAGCTAATAAAGCCTCGTAAAGTTTACTAGAAACGCCTACTTCGGCTGTACGCTAGATTGATTTTACAAATAATACTGTATAc < 2:5146698/139‑1 (MQ=255) aTGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTa < 1:867557/140‑1 (MQ=255) aTGAAGATATTATTCAACCACTTCATCAGCAGTGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGACTTCTTCGGCTGTACGGTCGCTTGATTTTACAATTAATACTGTAGACATTTGTa < 1:4095882/140‑1 (MQ=255) gAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGTTTTTAAAAAAAATAATGTTTAAATTTTTAtt > 1:135480/1‑140 (MQ=255) gATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATtcct < 2:2826187/140‑1 (MQ=255) aTCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATtcctc < 2:6386480/140‑1 (MQ=255) aCCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTTATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACt > 2:7590111/1‑140 (MQ=255) aCCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTTCAAAAAATAATGTATTCATTTGTTTTACTCCCGGGAAACt > 2:3002113/1‑140 (MQ=255) aCCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGAAATTTTTATTACTACCGGTAAACt > 2:4341708/1‑140 (MQ=255) tgagcagGGTGATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTTATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATAtt < 2:4569485/138‑1 (MQ=255) tcaGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATAtt < 1:6604724/140‑1 (MQ=255) tcaGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATAtt < 1:7066763/140‑1 (MQ=255) tcaGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATAtt < 1:6031003/140‑1 (MQ=255) tcaGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATAtt < 1:1909183/140‑1 (MQ=255) tcaGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATAtt < 2:5062415/140‑1 (MQ=255) agcagGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTaa < 1:2850042/140‑1 (MQ=255) cagGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACt < 1:4205798/140‑1 (MQ=255) cagGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATAATGTAGACAGTTGTATTCCTCCCGGTAAACATTTTATATTAACt > 2:4205798/1‑140 (MQ=255) cagGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGATTTTAAAAAAAATAATTTAGTCAATTGTGTTACTGCCCGTGAAATTTTTTTTTTAACt > 1:885103/1‑140 (MQ=255) gggTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGGTGGATTTTTCAAATAATAATGTAGAGATGTGTTTTGCTCCCGGGTAAGGGTTTATATTGAGTTa > 2:5073647/1‑140 (MQ=255) gggTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGTTTTTAAAAATAATAAAGTGGAAATTTTTATTACTCCCGGTAAAGATTTTATATTAAATTa > 1:5096409/1‑140 (MQ=255) gTTATTTTCTTTATAAGCAGCTAAGAAAGCCTAGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACa < 1:1106659/140‑1 (MQ=255) tATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACaaa < 1:625938/140‑1 (MQ=255) tATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACaaa < 1:4664483/140‑1 (MQ=255) tATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACaaa < 2:1410993/140‑1 (MQ=255) ttttCTTTATAAGCAGCTAAGAAAGCCTCGTAAATTTTAGTTGAAACGCCTTGTTCGGCTGTACGGTCGCGTGTATTTAAAAATAATAATTTATAAATTTTTTTTACTCCCGGTAAAATTTTTTTATTAACATACACATa > 1:684443/1‑140 (MQ=255) tttATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTTCAAATAATAATGTAGAAATTTGTATTACTCCCGGTAAACTTTTTATATTTAATTAAAAATAGTATg > 2:6832522/1‑140 (MQ=255) tttATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTAAGGTCGCTTGATTTTAAAAAAAAAAATTTAGACAATTTTATTACTCCCGGTAAAATTTTTATATTAAATAAAAAATAGTAtt > 2:2021314/1‑139 (MQ=255) gcagcTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGATTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTActtt < 2:3576731/140‑1 (MQ=255) gcTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGGTTTTACAAATAAAACTGTAGACATTTGTTTTGCTCCCGGTAAACTTTTTATATTTAAATAAAAAAATTATTTTActttgtt > 1:5544736/1‑140 (MQ=255) tAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCtttt < 2:1151863/140‑1 (MQ=255) aaGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGATTTTAAAAATAATACTGTTGAACTTTGTATTGGTGCCGGTAAACTTTTTATTTTAACTTAGAAATAGTATGTTTCTTTCttttt > 2:7238544/1‑140 (MQ=255) gCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGTTTTTACAAATAATACTGTAGACATTTGTATTCCGCCCGGGAAACTTTTTATATTAACTTACAAATAGGATTTTAGTTTGTTTTTTAAGcc > 2:7365795/1‑139 (MQ=255) gCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTAAAAATAATACTGTAGACAATTGTATTACTCCCGGTAAACGTTTTATATTAACTTACAAATAGTATGTTACTTTATTTTTTACGCa > 2:2240941/1‑140 (MQ=255) cTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGAACTTTGTATTCCACCCGGTAAACGTTTTATATTAACTTAAAAAAAATATGTTAATTTATTTTTTaatgaaa > 2:6461637/1‑134 (MQ=255) cTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTAAAAATAATACTGTAGACATTTTTATTCCTCCCGGTAAACTTTTTATATTAAATTACAAATATTATTTTAATTTATTTTTTACGCaaa > 2:5280314/1‑140 (MQ=255) cTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTGGTTTTTTTAAAAAATAAAGTATACAATTTTTTTGGGGCCGGGCAACTTTTTTTTTTTAATTAAAAATATTATTTTAAtttttttttttagaaaa > 1:2939709/1‑133 (MQ=255) cTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTTAAAAAAAAAAAGTAGTCCATTGTTTTGCGCCCGGTAAACGTTTTATATTAACATAAAAATAGTGTGTGACTTTATTTTTTTAGCaaa > 1:580018/1‑140 (MQ=255) cTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTACAAATAATACTGGAGACCTTTGTTTTGCTCCCGGTAAACGTTTTATATTAACATACAAAAAGTAAGTGTCTTTTTTTTTTTAGCaaa > 1:639937/1‑140 (MQ=255) cTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTAAAAAAAAAAAATTTGACATTTGTTTTACTCCCCGGAAACGTTTTTTATTAAAATAAAAATAGTATTTTACTTTATTTTTTAATCaaa > 1:6214266/1‑140 (MQ=255) cTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGATTTTACAAATAATACAGTATACATTTGTATTGCTCCCCGTAAACGTTTTATATTAACTTACAAAAATTATGTTAGTTTCTTTTTTTCGCaaa > 1:5174570/1‑140 (MQ=255) gTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTTATTTTTAAAATAATACAGTATACATATGTAATGCTGCCGGGGAAGTTTTTATATTAACTTACAAATAGTATGTGACTTTATTTTTTACGCaaacta > 1:7521776/1‑137 (MQ=255) gTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTTAAAATAAAAATGTAGACATTTTTATTTCTCCCCGGAAACGTTTTATATTAAATTACAAAAATTATGTTACTTTCTTTTTTAAGCAAAGTc > 1:1537382/1‑140 (MQ=255) aGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATc < 1:396328/140‑1 (MQ=255) aGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATc < 1:1061202/140‑1 (MQ=255) aGTTTAGTTGAAACGCCTTCGTCGGCTGTACGGTCGCTTGAGTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAACTAGTATGTTACTTTCTTTTTTACGCAAAGTCAATc < 1:2527576/140‑1 (MQ=255) tttAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCGTGTTTTTACAAATAATAATGTATTCATTTTTATTGCACCCCGGCAACGTTTTTTATTAAATTAAAAAAAGTATTTTTATTTATTTTTTTAGCAAACTCAAacac > 1:359511/1‑140 (MQ=255) gTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATTATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTAATTTATTTTTTGAGCAAAGTGAATCACTTTa > 2:4299485/1‑140 (MQ=255) ttGAAACGCCTTCTTCGGCTGTACGGTCGCTTGGTTTTTAAAATAAAACTTTAGACATTTTTATTACTCCCGGGAAACATTTTTTATTTACTTACAAAAAGTATGTTTATTTGTTTTTTAAGCAAACTCAATCAAttttt > 1:5781399/1‑138 (MQ=255) aCGCCTTCTTCGGCTGTACGGTCGCTTGGTTTTAAAAATAATACAGTAGACAATTGTATTACTCCCCGTAAAATTTTTATATTAAATTAAAAATATTATTTTACTTTATTTTTTTAGCAAAATGAATAAATTTATTTTGa > 2:708173/1‑140 (MQ=255) aCGCCTTCTTCGGCTGTACGGTCGCTTGATTTTAAAAATAAAAAAGTTGACAATTGTATTCCGCCCGGGAAACATTTTATATTAACTTACAAATAGTATGTTAATTTATTTTTTAAGCAAAGTCAAACAAGTTATTTTgt > 2:7061941/1‑139 (MQ=255) tGATTTTTCAAAAAATAATTTAGTCAATTGTATTCCTCCCCGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTGTTTTTTAATCAAAGTCAATCACATTATTTTTAATATTAGATTTTTTTTAAAAAAAAAg > 2:7129306/1‑140 (MQ=255) tGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGTTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAACCACTTTATTTTGAATATGACATTTTTTTTCAAAAAAAAg < 2:684443/140‑1 (MQ=255) tGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAg < 2:177905/140‑1 (MQ=255) tGAATTTAAAAAAAAAACAGTATACAATTTTATTGCTCCACGTAAACTTTTTATATTAACTTACAAATACTATGTTAATTTAATTTTTAAGCAAAATAAAAAAAGTTATTTTGAATATGAGAATTATTTTCaaaaaaaaa > 2:4483852/1‑139 (MQ=255) tttACAAATAATACTGTAGACCTTTGTATTCCTCACGGTAAACTTTTTATATTCACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAg < 2:1276589/140‑1 (MQ=255) cttACAAATAATCCGGGAGACATTGGTATTCCTCCCGGTAAACTTTTTATCTTACCTTACAACTAGAATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTATGAATATGAGATTTATTTTCAAAAAAAAGCAAg < 2:5665399/139‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:3958823/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:891818/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:848276/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 1:240533/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:5910441/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:2170830/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:5781399/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:4091542/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt > 2:2531696/1‑140 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:3654514/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:2977724/140‑1 (MQ=255) ttACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACGTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:2972795/140‑1 (MQ=255) ttACAAATAATAATGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:4356196/140‑1 (MQ=255) ttACAAATAATAAGGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:5544736/140‑1 (MQ=255) atACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTGACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGt < 2:6517447/139‑1 (MQ=255) aaaTAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACAt < 2:167633/140‑1 (MQ=255) aaaTAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACAt < 2:135480/140‑1 (MQ=255) aaaTAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACAt < 2:3502482/140‑1 (MQ=255) aaaTAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACAt < 2:6042162/140‑1 (MQ=255) tataATGTAGATATTTGTATTACTCCCGGTTAACTTTTTTTATTAACTTACATATAGTATTTTACTTTCTTTTTTTCGCAAAGTCAATCACTTTATTTTGAATATGAGAGTTTTTTTCAAAAAAAAGCAAGTACATCTat < 1:4539259/139‑2 (MQ=255) aataCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTaa < 1:3411839/140‑1 (MQ=255) aataCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTaa < 2:2485631/140‑1 (MQ=255) aCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCTATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTAatat < 2:2939709/140‑1 (MQ=255) aCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTAatat < 2:6214266/140‑1 (MQ=255) aCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTAatat < 1:6832522/140‑1 (MQ=255) aCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTAatat < 1:4475802/140‑1 (MQ=255) aCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTAatat < 1:4037059/140‑1 (MQ=255) aCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTAatat < 1:3160734/140‑1 (MQ=255) aCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTAatat < 1:2021314/140‑1 (MQ=255) aCTGTAGACATTTGTAGTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTAatat < 1:676086/140‑1 (MQ=255) | AAGGTTCTCTTTATGAAGATCTAATTCAACCACTTCATCAGCAGGGTTATTTTCTTTATAAGCAGCTAAGAAAGCCTCGTAAAGTTTAGTTGAAACGCCTTCTTCGGCTGTACGGTCGCTTGATTTTACAAATAATACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTAACTTACAAATAGTATGTTACTTTCTTTTTTACGCAAAGTCAATCACTTTATTTTGAATATGAGATTTTTTTTCAAAAAAAAGCAAGTACATCTAATATC > NZ_CP034943/2103637‑2103913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |