| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,387,114 | C→A | 8.3% | V338L (GTA→TTA) | EO946_RS12195 ← | acetyl‑CoA C‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,387,114 | 0 | C | A | 8.3% | 997.5 / 21.7 | 399 | V338L (GTA→TTA) | EO946_RS12195 | acetyl‑CoA C‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (192/155); new base A (43/3); total (240/159) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.44e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 400 total aligned reads displayed.
GAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAACCCCGGAGC > NZ_CP034943/2386976‑2387252 | aGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTTATTCGTAAACAAGTGTCCTGAGTATTGTCGCACCGCGTGCGCCGATCGGGTGGGCGAGGGCGAGCGCCACACCGGGTTCAATTACtt > 1:4376981/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCa > 2:4389162/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGGTTACATTTACtttttaa > 2:1149323/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCGTGCGCCGATCGCGTGGCCGAGGGCGCTCGCACCACCGGTTACATTTACTTTTTCa > 2:7151130/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTAATGAGTATTCTCGCACCGCGTGCGCCGATCCGGTGGCCGAGGGCGATAGCACCACCGGTTAAATTTAAtttttaa > 2:4962395/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGGAAACCAGGGTCATGAGTATTCTCCCCCCGCGTGCGCCGATCGGGGGGCCGAGGGCGATCGCACCACCGTGTACCTTTACtttttaa > 2:1247552/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAAGTCGTAAACCAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTAATTTTTCa > 2:3779471/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTTATTCGTAAACAACTGTGATGAGTATTCTGGCACCCCGTGCGCCGCTCGGGTGGGCGCGGGCGATCGCCCCACCCGTTACATTTTAtttttta > 1:6473022/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTAGTAAACAAGTGTCATGAGTAATCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGGTTAACATTAAtttttaa > 2:2383775/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGGCGCGTTATTTCGTTAAACAGTGTCATGAGGATTCTCGGACCGCTTGGGGCGATCGGGTGGGCGAGGGCGGTCGCACCACCGGTGGCCTTTTCTTTTTCa > 1:6046006/1‑140 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTAGTAAAAAACTGTCATGAGTAATATGGCACCCCATGGGCCGATCGGGTGGCCGAGGGCGAGGGCCCCCCCGTTTACATTTACTTTTTGAAGATc > 1:2166395/1‑140 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTAGTAAACAAGTGTGATGAGGATTCTAGCACCGCGTGCGCCCATCGGGGGGCCGAGGGCGCTCGCACCACCCGTTACATTTAATTTTTAAAGAta > 1:3810836/1‑139 (MQ=255) aaTGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTCGTAAACACGTGTCATGAGTATTCTCGCCCCCCATGCGCCCATCGGGTGGCCGAGGGCCATCGCACCACCCGTTCAATTTACATTTTAAAAATCGAAAc > 2:6448059/1‑140 (MQ=255) aaTGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTCGTAAACAAGGGTCATGAGTATTCTCGCACCCCGTGCGCCGGGCGGGTGGCCGTGGGCGATCGCACCCCCCGTTCCCATTAAATTTTCAATATCGAAAc > 1:7417575/1‑140 (MQ=255) ggcggcAACACCCAGTCCCCCTCCCCGTCGCTTTAATTAGTAAACAAGTGTCATGCGTATTCTCGCACCGCTTGCGCCGATCGGGTTGCCGAGGGCGCACGCACCACCGGTTACATTTACTTTTTAAAGATCGAAACcgc > 2:2796355/1‑139 (MQ=255) ggcAACACCCAGTCCCCCTCCCCGTCGCGTTAATTCGTAAACAAGTGTCAAGGGTATTCTCGCACCGCGTGCGCCGCGCGGGTGGCCGAGGGCGCTCGCACCACCCGTTACATTTACTTTTTCAAGATCGAAACcgacga > 2:1877794/1‑140 (MQ=255) ccAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTa < 1:2566378/140‑1 (MQ=255) ccACTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTa < 1:6817754/140‑1 (MQ=255) ccTCCCCGTCGCTTTAATTCGTAAAAAATTGTCATTAGTATTCTCGCACCGCTTGCGCCCATCGGGTGGCCGAGGGCGATCGCACCCCCGTTTACATTTTCTTTTTAAAGATCGAAACCGACGATTTTTTTAAATGTCaa > 2:4569362/1‑140 (MQ=255) cGTCGCGTTAATTCGTAAAAAAGTGTGATGTGTATTGTCGCACCGCGTGCGCCGATGGGGTGGCCGAGGGCGATCGCACCACCGGTTACATTTACTTTTTGAAGATCGAAACCGACGATTTTTTTACATGTGAAaacaaa > 2:2140474/1‑139 (MQ=255) ttAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCa < 2:7338839/140‑1 (MQ=255) tAATTCCTAAACAACTGTCATGTGTATTCTGGCACCGCATGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGGTTACATTTACTTTTTCAAGATCGAAACCTACGATTTTTTTGCATGTCAAAACAACAGAAGccc > 2:6702535/1‑138 (MQ=255) tAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTc > 2:1921267/1‑140 (MQ=255) tAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTc > 2:6520044/1‑140 (MQ=255) aaaCAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCa > 2:3126715/1‑140 (MQ=255) aaCAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCAt < 2:6149062/140‑1 (MQ=255) aaCAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCAt < 2:3853430/140‑1 (MQ=255) aaCAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCAt < 2:782207/140‑1 (MQ=255) aaGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTCCATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTa > 2:2966023/1‑140 (MQ=255) tCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACTACAGAAGCAAACGCTTCATTTACTTCa > 2:4770044/1‑140 (MQ=255) tCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCa > 2:5725321/1‑140 (MQ=255) aTGAGTATTCTCGCACCGCTTGGGCAGATCGGGTGGCCGAGGGCGATCGCACCACCTTTTACATTTAGTTTTTCATGATCGAAACCGACGATTTTTTTTCATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTaaaa < 1:943897/140‑1 (MQ=255) aTGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCaaa < 1:607008/140‑1 (MQ=255) aTGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCaaa < 1:1055970/140‑1 (MQ=255) aTGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCaaa < 1:2048580/140‑1 (MQ=255) aGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACaa > 2:6363913/1‑140 (MQ=255) aGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAAAGCTTCATTTAATTCAAACaa > 2:3517845/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 1:7111956/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 1:552361/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 2:142056/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 1:6391503/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 1:1659615/1‑140 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTGTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 2:1693596/1‑140 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCACGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACCAGTCa < 1:5759272/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:1791066/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:6901344/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 2:3653574/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa > 2:6042530/1‑140 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:4419590/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:2777290/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:3126715/140‑1 (MQ=255) gtctcGCACCGCGTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:2307090/139‑1 (MQ=255) tctcGCACCGCTTGCGCCGATCGGGTTGCCGATGGCGATCGAACCAACTTTTAAATTTACTTTTTCAATATCTAAAAATAAGATTTTTTTACATGTCAAAACATCTGAAGAAAAATATTCATTTACTTCAAACAAGTaaa < 2:2224288/140‑1 (MQ=255) tctcGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCaa > 1:5563360/1‑140 (MQ=255) tcGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAata > 1:7575704/1‑140 (MQ=255) tcGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAata > 1:5910377/1‑140 (MQ=255) ccGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTg < 2:5961671/140‑1 (MQ=255) ccGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTg > 1:7046143/1‑140 (MQ=255) gcgtGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 2:7617934/137‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 2:558510/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 2:3270333/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 2:2067455/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 2:7111956/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 1:4220798/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 1:3232271/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 1:2619384/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 1:126886/140‑1 (MQ=255) gCTTGCGCCGATCGGGGGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 2:6796673/140‑1 (MQ=255) cTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 1:3410177/139‑1 (MQ=255) cTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGAc > 1:7686042/1‑140 (MQ=255) cTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGAc > 1:250203/1‑140 (MQ=255) tGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACgg < 2:1618300/140‑1 (MQ=255) tGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACgg > 1:5063130/1‑140 (MQ=255) gATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAAc > 2:5864801/1‑140 (MQ=255) gATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAAc > 2:5325558/1‑140 (MQ=255) aTCGGGTGGCCGAGGTCGATCGCACCACCGTTTAGATTTACTTTTTCAAGATCGAAACCGTCGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAAcc > 1:1162728/1‑140 (MQ=255) aTCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTAATTCAAACAAGTCAATATCTTGGACGGTTAAAcc > 2:5454375/1‑140 (MQ=255) aTCGGGTGGCCGAGGGCGATCGCACCACCGATTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTCCTTCAAACAAGTCAATATCTTGGACGGTTAAAcc > 1:515194/1‑140 (MQ=255) tCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCAt > 2:2524562/1‑102 (MQ=255) ggTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTc < 1:1580340/140‑1 (MQ=255) gTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCACTATCTTGGACGGTTAAACCGTTCt > 2:4299647/1‑140 (MQ=255) gTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCt > 2:886303/1‑140 (MQ=255) gTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCt < 2:6241096/140‑1 (MQ=255) cGAGGGCGATCGCACCACCGTGTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTc > 2:270066/1‑140 (MQ=255) cGAGGGCGATCGCACCACAGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAAAGCTTCATTTACTTCAAACAAGTCAAAATCTGGGACGGTTAAAGCGTTATATTTc > 2:6322019/1‑140 (MQ=255) gAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAACTAAATATCTTGGACGGTTAAACCGTTCTTTTTCa < 2:3424680/140‑1 (MQ=255) aTCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCtt > 2:7238202/1‑140 (MQ=255) tCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAAc > 2:7423296/1‑120 (MQ=255) caccacAGTTTAAATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTa < 2:4733661/140‑1 (MQ=255) ccGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGc > 2:6969432/1‑140 (MQ=255) cGTTTACATTTACTTTTTCACGATCGCAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCa < 2:6005055/140‑1 (MQ=255) gTTCACATTTACTATTTCAAGATCGAAACCGAAGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCaa < 1:4713686/140‑1 (MQ=255) aCATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAAccc > 1:4169219/1‑140 (MQ=255) aCATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTGCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAAccc > 2:13161/1‑140 (MQ=255) aTTTACTTTTTCAAGATCGAAACCTACGATTTTTTCACATGTCAAAACAACTGAAGCAAAAGCTTCATTTACTTCAAACAAGTCAATATCTTGGACAGTTAAACCATTCTTTTTCAGGAGCTTGTTAATAGCAAAccctg > 2:7571575/1‑138 (MQ=255) ttACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAACCCCGGa > 2:1567020/1‑140 (MQ=255) ttACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAACCCCGGa > 2:5142324/1‑140 (MQ=255) ttACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTATGACGGTTAAACCGTTCTTTTTCAGGAGCTTTTTAATTGAAAACCCCGGa > 2:4061065/1‑140 (MQ=255) ttACTTTTTCAAGATCGAAAAAGAATATTTTAAAACATGTCAAAACAACATAAGCAAACGCTTCATTTACTTCAAAAAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTAAGGAGCTTGTTAATTGAAAACCCCGGa > 2:1269761/1‑140 (MQ=255) aCTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAACCCCGGAGc < 2:5049235/140‑1 (MQ=255) | GAGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAACCCCGGAGC > NZ_CP034943/2386976‑2387252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |