| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,729,932 | C→A | 7.2% | M278I (ATG→ATT) | lcfA ← | long‑chain‑fatty‑acid‑‑CoA ligase LcfA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,729,932 | 0 | C | A | 7.2% | 1220.4 / 17.8 | 453 | M278I (ATG→ATT) | lcfA | long‑chain‑fatty‑acid‑‑CoA ligase LcfA |
| Reads supporting (aligned to +/- strand): ref base C (103/296); new base A (51/2); total (154/299) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.75e-24 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 462 total aligned reads displayed.
GATGACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCA > NZ_CP034943/2729795‑2730071 | gATGACAGATCATAATGCTGCCATTCGGGGTGATGCAAAGGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTTTCGATGAGTTTACGCGTTTTGTGCGGATAAAAAATAGGGCGTAGAATCAt > 1:7766726/1‑140 (MQ=255) aTGACAGATCATCATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCCTTTCGAGCGGATCAAACGTATGAAGAAGAATCAtt > 2:1768913/1‑140 (MQ=255) aTGACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGATGATTTTAAGCGTTTAGAGCGGATCAAACTTAGGAAGAAAAATAAtt > 2:1483409/1‑140 (MQ=255) aCAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:5483633/140‑1 (MQ=255) aCAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:4993289/140‑1 (MQ=255) aTCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTGGATGATTTTGAGCGTTTGGCGCGGATCAAACTTTGGAAGAAGAATCATTTAGTAGc > 1:6851652/1‑140 (MQ=255) tCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGcc < 2:5454044/140‑1 (MQ=255) tCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGcc < 2:2905142/140‑1 (MQ=255) tCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGcc < 2:6233698/140‑1 (MQ=255) tCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGcc < 2:7314112/140‑1 (MQ=255) tCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGcc < 1:6990163/140‑1 (MQ=255) tCATAATGCTGCAAGTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGcc < 1:89277/140‑1 (MQ=255) aTAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCTGTGAACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGATTATTTTAAGCGTTTAGAGCGGATCAAAAATAGGAACAAGAATAATTTTGaataata > 2:6079179/1‑135 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGTTGATTTTAACCGTTTTGTGCGGATCAAAATTAGGGATAAGAAAAAATTAGAAGCCTAGttttaa > 1:6624019/1‑137 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTAGATGATTTTGAGCGTTTGGAGCGGATAAAAAGTAGGAATAATAATCATTTATAATACTAGTTTAAt > 1:3296775/1‑140 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTGGATTTTTTTCAGCGTTTCGAGCGGATCAAAATTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAAt > 2:1568895/1‑140 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTTTGGATGTTTTTCATCGTTTAGTGCGGAAAAAAATTAGGAAAAAGAATCAATTAGAAGCCAAGTTTCAt > 1:5229983/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTGGATGATTTTAAGCGGTTCGAGCGGATCAAAATTATGAAGAAAAATAAATTCGAAGCCTATTTTAAACg > 2:3566526/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGATGATTTTAAGCGTTTGGAGCGGATCAAACTTAGGAAGAAGAATAAATTCGAAGGCTAGTTTAAtag > 2:2296479/1‑138 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTGGATTATTTTCAGCGTTTGGTGCGGATCAAACTTATGTAGAAGAATCATTTGGAAGCCGAGTTTAAtag > 1:7301023/1‑138 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGAATATTTTGAGCGTTTCGAGCGGATCAAAATTAGGAAAAAGAAACATTTAGAAGGCTAGTTTAAtag > 2:3347599/1‑138 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTTTTTGGCGATGATTTTCATCGTTTAGAGCGGATCAAAAATAGGAAGAAGAATCATTTGGAAGCCGAGGTTAATCg > 2:4028749/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTGTCGATGATTTTAAGCGTTTCGAGCCGATCAAAATTATGAAGAATAATAATTTCGAAGCCTAGTTTAATCg > 2:532158/1‑140 (MQ=255) cGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGaataa < 1:558557/140‑1 (MQ=255) cGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGGTTCGAGCGGATCAAAATTATGAAGAAGAATCATTTAGAAGCCTAGTTTAATCGaataa > 2:7020054/1‑140 (MQ=255) gggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTTTGTGTCGATGATTTTAAGCGTTTGGAGCGGCTGAAACTTAGGAAGAACAATCATTTAGAAGCCGAGTGTAATCGCATAAtt > 1:2074580/1‑140 (MQ=255) gggTGATGCAAAAGGCCAATGTAAATGGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAAtt < 1:1674531/140‑1 (MQ=255) ggTGATGCAAAAGGCCAATGTCCATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTGTCGATGATTTTGCGCGGTTCGAGCGGATGAAACTTAGGAAGAAGTAAACTTTAGAAGCCGAGTTTAATCGAATAATtc > 1:3637741/1‑140 (MQ=255) ggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGCTGATTTTAAGCGTTTAGATCGGATAAAACGTTGGAAGAACAAAAATTTCGAAGCCTAGTTTAATCGaaaaatac > 2:4172978/1‑138 (MQ=255) aTGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTGTCGATGATTTTGAGCGTTTAGAGCGGATCAAACTTAGGAAGAAGAAACATTTCGTAGCCGAGTTTAATCGAATAATtcatca > 1:3071042/1‑140 (MQ=255) tGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTTTCGATTATTTTAAGCGTTTAGAGCGGATGAAACTTATGAAAAAGAATAAATTAGAATCCTAGTTTAATAGAAAAAttaaaaac > 1:3904238/1‑134 (MQ=255) tGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTTTCGATGATTTTGAGCGTTTGGAGCGGGTCAAACTTAGGCAGAAGAATAAATTAGAAGCCTGGTTTAATCGAATAATTCAacac > 2:714805/1‑140 (MQ=255) tGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCAc < 1:6752466/140‑1 (MQ=255) tGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCAc < 1:5912470/140‑1 (MQ=255) tGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTGTCGATGATTTTGAGCGTTTAGAGCGGCTAAAAAATATGAAGAACAATAAATTCTAAGACGAGTTTAATCGAATAATTAATAAc > 1:7358923/1‑140 (MQ=255) aaGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTAGAAGCCGAGGTTAATCGAATAATTCATCACAGCCg > 2:1363020/1‑140 (MQ=255) aaGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCg < 1:1386358/140‑1 (MQ=255) atgCCAATGTAAATTGTCGGTGCAACCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCTGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGt < 1:4653251/138‑1 (MQ=255) aGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGt < 2:3810035/140‑1 (MQ=255) aGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGt < 1:6499331/140‑1 (MQ=255) gCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCa < 1:7577481/140‑1 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGAACAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 2:1131722/140‑1 (MQ=255) cAATGTAAAGTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTGGTCGATGAATTTCAGCGTTTCGAGCGGATCAAACTTTGGTAGACGAATCATTTCGACGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 2:421552/140‑1 (MQ=255) aTGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTGTTTTTTTGGATGTTTTTAAACCTTTCGAGCGGCACAAAATTAGGAATAATAATAAATAAGAACGCTAGTTTAATAGAATAAATAATAACTTcagtcagtac > 1:614726/1‑138 (MQ=255) aTTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTTTGAAGAAGAATCAATTCGAAGCCTAGTTTAATCGAATAATTCATAACTTCCGTCAGTCCGtgaaa > 2:7555078/1‑136 (MQ=255) cGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTGTGGATTAATTTGAGCGTTTCGAGCGGATGAAAATTAGGAAAAACAATAATTTCGAAGCCTATTTTAATTGACAAATAAATGACTTCCGTGAGTGCGTATAAGTgta > 2:4746684/1‑138 (MQ=255) cGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGa < 1:5780846/140‑1 (MQ=255) gAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACg < 1:1567246/140‑1 (MQ=255) gAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACg < 1:4199166/140‑1 (MQ=255) gAAAGAGAGTCGGTTTTTGTGTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACg < 1:4384133/140‑1 (MQ=255) gagTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGccc < 1:636601/140‑1 (MQ=255) tCGGTTTTTGTTTGTCGATTATTTTAATCGGTTCGAGCGGATCAAACTTAGGAAGAAGAAACATTTAGCACCCAAGTTTTATCGAAATATTAATCACATCCCTCAGTCCGTATACGTTAAAAAACCGGAAGATGcacacc > 2:7660054/1‑138 (MQ=255) cGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCa < 1:3744474/140‑1 (MQ=255) gggttttGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAATAAGAATCATTTAGAATCATAGTTTAATCGAAAAAATCAAAAAATCCGTCCGTCCGTATAAGTGAAAAAAAGGGACGATGCCCAGCAc > 2:4461795/4‑140 (MQ=255) ttgtttgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACttttt < 1:3515119/140‑1 (MQ=255) tgtgtCGATGATTTTCGGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAg < 1:7489945/138‑1 (MQ=255) ttgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGc < 1:2787919/140‑1 (MQ=255) tgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcc < 2:427149/140‑1 (MQ=255) tgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcc < 2:855783/140‑1 (MQ=255) tgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcc < 1:2466624/140‑1 (MQ=255) tgtCGATGATATTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGACTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcc < 1:4461795/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:1483409/140‑1 (MQ=255) atgatTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCccttc < 2:5024062/140‑1 (MQ=255) atTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCccttcctt < 1:100808/140‑1 (MQ=255) tttCAGCGTTTCGAGCGTATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCTAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 2:7250741/140‑1 (MQ=255) tttCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 1:6773022/140‑1 (MQ=255) tttCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 2:3244211/140‑1 (MQ=255) tttCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 1:5336304/140‑1 (MQ=255) tCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTcaca < 1:5148535/140‑1 (MQ=255) tCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTcaca < 1:4874582/140‑1 (MQ=255) tCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTcaca > 2:5877384/1‑140 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATTATTTCTAAGCCTAGTTTAATCGAATAATTCATCACTGCAGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCAAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:7435296/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:3807083/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:1089416/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:1304087/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:1801717/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 2:5600046/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:480687/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 2:2589045/140‑1 (MQ=255) gCGTTTCGAGCGGAACAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:6076044/140‑1 (MQ=255) gTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTa < 1:2694474/140‑1 (MQ=255) gATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCg < 2:5229983/140‑1 (MQ=255) gATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCg < 2:6624769/140‑1 (MQ=255) aTCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCgg > 2:3018693/1‑140 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTTATCGAATAATTCAGCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 2:2692576/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:3698722/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:6833666/140‑1 (MQ=255) ggAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTc > 1:3151344/1‑140 (MQ=255) gaagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCAc < 1:2245799/88‑1 (MQ=255) gaagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCAc > 2:5562164/1‑88 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGc > 2:6580720/1‑80 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCTGTAt > 2:7759479/1‑140 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTAt > 2:5939954/1‑140 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTAt > 1:188580/1‑140 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTCCACATCGTACATCCAAGCGGAg > 1:2524680/1‑127 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCACAGCACTTTTTCAGCCCCTTCCTTCACATCGTAAATACAAGCGGAGAACATTTCAGTAt > 2:740719/1‑140 (MQ=255) aTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGc < 1:452635/140‑1 (MQ=255) cATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCa < 2:5720109/140‑1 (MQ=255) cATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCa < 2:191457/140‑1 (MQ=255) cATTTCGAAGCCTAGTTTAATCGAATAATTCATAATTGCCGTCAGTCGTTATACGTGAAAAAACGGGACGATGCCAAGAACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGTAGCACATTTCAGTATTGGCCa < 1:5400465/140‑1 (MQ=255) | GATGACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCA > NZ_CP034943/2729795‑2730071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |