| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,729,937 | C→A | 6.1% | E277* (GAA→TAA) | lcfA ← | long‑chain‑fatty‑acid‑‑CoA ligase LcfA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,729,937 | 0 | C | A | 6.1% | 1285.6 / 13.3 | 471 | E277* (GAA→TAA) | lcfA | long‑chain‑fatty‑acid‑‑CoA ligase LcfA |
| Reads supporting (aligned to +/- strand): ref base C (81/323); new base A (45/2); total (146/325) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.01e-25 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 471 total aligned reads displayed.
ACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCAAAAT > NZ_CP034943/2729799‑2730075 | aCAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:4905021/140‑1 (MQ=255)aCAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:1537158/140‑1 (MQ=255)aCAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:4312377/140‑1 (MQ=255)aCAGATCATAATGCAGCAATTCGGGGTGCTGCAAAAGGCCAATGTTAATTGTCGGTGCAACCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATGTTCAGCGTTTCGAGCGGATCAAACTTAGGACGAAGAATCATTTCg < 1:2716469/140‑1 (MQ=255) aTCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTGTCGATTATTTTACGCGTTTCGAGCGGATCAAACATAGGAAGAAGAATCAATTAGAAGc > 2:4528099/1‑140 (MQ=255) tCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGcc < 2:573606/140‑1 (MQ=255) tCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGcc < 2:3885994/140‑1 (MQ=255) tgctgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTAAGCGTTTCGAGCCGCTCAAACTTATGAAGAAGAATCATTTGGAAGCCGAGgtt > 2:6158743/1‑140 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGACAGAGAGTCGGTTTTTGTTTGTCGATGATTTTAAGCGTTTCGAGCGGATCAAAAGTAGGAAGAAGAATAATTTAGAAGCCGAGTTTAAt > 2:859135/1‑140 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTAGATGATTTTGAGCGTTTGGAGCGGATAAAAAGTAGGAATAATAATCATTTATAATACTAGTTTAAt > 1:3296775/1‑140 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTGAGCGTTTCGAGCGGCTCAAACATAGGAAGAAGAATCATTTCTAATCCGAGTTTAAt > 1:5717189/1‑140 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTTTGGATTATTTTCAGCGGTTGGCGCGGGTCCAAAATAGGTAGAAAAATAATTTAGAAGCCGAGttttag > 1:5922484/1‑137 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTGTCGATGATTTTCAGCGTTTAGAGCGGATAAAAATTAGGAACAAGAAACAATTGAAAGCCTAGTTTaaaag > 2:4197294/1‑137 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTGGATGATTTTCAGCGTTTCGAGCGGAGAAAACATATGAAAAAGAATAATTTAGAATCCTAGTTTAAtag > 1:6439297/1‑138 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATTATTTTAAGCGGTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAAtag > 2:4029216/1‑138 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGTTTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTGGAAGCCTAGTTTAATCg > 2:4371174/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTAAGCGTTTAGCGCGGATCAAACTTAGGAACAAGAATCATTTAGAAGCCGAGTTTAATCg > 1:5429905/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTGTTTGTGTGTCGCTGATTTTCAGCGTTTCGAGCGGAGCAAAAATAGGAAGAAGAATAATTTAGAACGCGAGGTTAAtag > 1:2816732/1‑138 (MQ=255) aTTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGaa < 2:32875/140‑1 (MQ=255) aTTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGaa < 1:4487790/140‑1 (MQ=255) cGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGATGATTTTAAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATAATTTCGAAGCCTAGTTTAAACGaataa > 2:5640769/1‑140 (MQ=255) gggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAAtt < 1:5825404/140‑1 (MQ=255) gggTGATGCAAAAGGCCAATGTAAATGGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAAtt < 1:1674531/140‑1 (MQ=255) ggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGGTTTTCGATGTTTTTAAGCGTTTCGAGCGGATCAAAATTATGAAGAAGAATCATTTAGAACCCTAGTTTAATAGAAAAAtta > 2:5502632/1‑139 (MQ=255) ggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTGTCGATTGTTTTAACCGGGTGGAGCGGATCAAAAGTAAGAACAATATTAATTTAGACGCCTCGGTTAATAGCATAAtta > 1:675987/1‑139 (MQ=255) gATGCATAAGTACTATGTAAATTGTCGGTGCAGCCGGAAATAGATTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGAGGATAAAACTTATGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATtcatc < 2:6285113/140‑1 (MQ=255) gATGCAACAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATtcatc < 1:2048875/140‑1 (MQ=255) aTGCAAAAGGCCAATGTACATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTGTCGGAGATTTTAAGCGTTTCGAGCGGCTCAAACTTAGGAAGAACAAACAATTAGAAGCCGAGGTTAATCGAATAAAtcaaac > 1:3210687/1‑137 (MQ=255) aTGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATtcatca < 2:186515/140‑1 (MQ=255) caGGCGACTGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTGGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCg < 1:7327272/139‑1 (MQ=255) aaGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCg < 1:1386358/140‑1 (MQ=255) aaGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAAACATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCg < 1:4676791/140‑1 (MQ=255) aaGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGATTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGCATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCg < 1:7372561/140‑1 (MQ=255) aGGCCAATGTAAATTGTCGGTGCACCCGTAAAGAGACTCGGTTTTTGGTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGt < 2:7272973/140‑1 (MQ=255) ggCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCTGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTc < 1:6910905/140‑1 (MQ=255) cAATGTAAATTGTCTGTGCACCCGGAAAGAGAGTCGGTTTTTGTTGGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 1:7550110/140‑1 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 1:3080960/140‑1 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 1:981363/140‑1 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 1:6302654/140‑1 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 1:7479911/140‑1 (MQ=255) aTTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTTTGAAGAAGAATCAATTCGAAGCCTAGTTTAATCGAATAATTCATAACTTCCGTCAGTCCGtgaaa > 2:7555078/1‑136 (MQ=255) gTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTGTCGATTATTTTTAACGGTTAGAGCGGATAAAAAATATTAAAAAAAATAATTTATAAGCCAAGTTTAATAGAATAAATAAACACAGCCCGCACTCCCTATAcaat > 1:2517989/1‑137 (MQ=255) cGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATTAATTTCATCGTTTAGAGCGGATCAAAATTATGAAGAAGAATAATTTCGAAGCCAAGTTTAAAAGAATAATTCAACAAGGCCGTCAGTCCGTATAAGTGaa > 2:5121458/1‑140 (MQ=255) cGGTGCACCCGGAAAGAGAGTCGGTTTTTGGTTGTGGATTATTTTCAGCGATTCGAGCGGAGCAAAAAAAGGAAGAACACTCAATTCCAAGCCTAGTTTAATAGAATAATTCATCAATGCCCTCAGTCCGTATACCTGaa > 2:3764581/1‑140 (MQ=255) gAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACg < 1:6693516/140‑1 (MQ=255) agagagTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATg < 2:2994773/140‑1 (MQ=255) agagTCGGTTTTTTTTTGTCGATGATTTTCACCGTTTCGAGCGGATCAAAAATAGGAAAAACAATCATTTCGAATCCTAGTTTAATCGAATAAATCATAACTGCCGTCAGTCCCTATAAGTTAAAAAAAGGGACGATTcc > 2:1521192/1‑140 (MQ=255) agagTCGGGTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTATGAACAACAAAAATTTCGAAGCCTAGTTTAATCGAAAAATTCATCACAGCCGGCAGTCCGTATAAGTGAAAAAAAGGGACGATGcc > 2:6971847/1‑140 (MQ=255) gagTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGccc < 1:6576145/140‑1 (MQ=255) tCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGc < 2:1187559/140‑1 (MQ=255) cGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCa < 1:3744474/140‑1 (MQ=255) ggTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCAc < 2:3226440/140‑1 (MQ=255) ttgtttgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACttttt < 1:3515119/140‑1 (MQ=255) tgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcc < 1:855553/140‑1 (MQ=255) tgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcc < 2:5883585/140‑1 (MQ=255) tgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcc < 2:5438429/140‑1 (MQ=255) tgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcc < 2:246485/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGTCCAGCACTTTTTCAGcccc < 1:4821610/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:1483135/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:6083421/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 2:6653608/140‑1 (MQ=255) atgatTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCccttc < 1:4386820/140‑1 (MQ=255) atgatTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCccttc < 1:5360057/140‑1 (MQ=255) atTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCccttcctt < 1:100808/140‑1 (MQ=255) tttCATCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 2:6053942/140‑1 (MQ=255) tttCAGCGTTTCGTTCGGATCAAAATTAGGATGATTAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCTTAAGTCCGTATACTTGAAAAAACGGGACGATGCCCAGAACTTTTTCAGCCCCTTCCTTca < 2:7080928/140‑1 (MQ=255) tttCAGCGTTTCGAGCGTATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCTAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 2:7250741/140‑1 (MQ=255) tttCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 1:4051989/140‑1 (MQ=255) tttCAGAGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATACATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 1:3637859/140‑1 (MQ=255) tCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTcaca < 2:6585947/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:1089416/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:5153289/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 2:2841130/140‑1 (MQ=255) gTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTa < 1:5546543/140‑1 (MQ=255) gAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATcc < 2:5577919/140‑1 (MQ=255) gATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCATCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCg < 1:7190810/140‑1 (MQ=255) aTCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCgg > 2:4228552/1‑140 (MQ=255) aTCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCgg > 1:3846724/1‑140 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:3417627/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:814354/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:6833666/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:173287/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:2217790/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:3624715/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:5260518/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCAGTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATCCGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:7692566/140‑1 (MQ=255) ggAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTc > 1:2432281/1‑140 (MQ=255) gaagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCAc > 2:2245799/1‑88 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 2:2628309/127‑1 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTAt > 1:5110845/1‑140 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTAt > 1:188580/1‑140 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCACAGCACTTTTTCAGCCCCTTCCTTCACATCGTAAATACAAGCGGAGAACATTTCAGTAt > 2:740719/1‑140 (MQ=255) aagaaTAATTTCGAAGCCTAGTTTAATATAAAAATTCATAAATTCAGTCATACATTATAAGTGAAAAAACTGTACTATGACCATCACTTTTTCAGCCACTTCATTCACATCGTACATCCAAGCTGAGCACATTTAAGTAt > 2:5260518/1‑140 (MQ=255) agaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTAtt > 2:1659795/1‑140 (MQ=255) agaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATGTCAGTAtt > 2:7647070/1‑140 (MQ=255) gaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTg > 2:4802269/1‑140 (MQ=255) cATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCa < 1:6846762/140‑1 (MQ=255) cATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCa < 1:4542854/140‑1 (MQ=255) tttCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCaaa < 1:1263521/140‑1 (MQ=255) tCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCAAAAt > 1:2663104/1‑140 (MQ=255) | ACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCAAAAT > NZ_CP034943/2729799‑2730075 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |