| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,812,790 | T→G | 8.6% | E199D (GAA→GAC) | EO946_RS14520 ← | SDR family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,812,790 | 0 | T | G | 8.6% | 626.1 / 13.8 | 326 | E199D (GAA→GAC) | EO946_RS14520 | SDR family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (171/112); new base G (40/2); total (212/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.37e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 330 total aligned reads displayed.
GACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCAGCGCCAAATGCC > NZ_CP034943/2812651‑2812928 | gaCCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCt < 2:4322241/140‑1 (MQ=255) ccTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTc < 1:7709246/140‑1 (MQ=255) ccTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTc < 1:684994/140‑1 (MQ=255) ccTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTc < 2:329297/140‑1 (MQ=255) tCCGGTGGCTTCAAAGACAGTTAATTTAACAAGCACTTAGTTAACCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTAGCGTACGGGCttacg > 2:3498424/1‑137 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCCGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTGCCTGGCGTCctc > 2:2231677/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCCCTTGGCTTACTGGCTTGctc > 1:4781634/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCctc > 2:6072467/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCctc > 1:5068683/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCctc > 1:3649644/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCGTActc > 2:3199979/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTCCTGGCGTccgc > 1:1236192/1‑138 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTACTTGCCGATTCGCTTCCTGGCTTGctc > 1:4865718/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCTTGCCGATTCGCTTCCTGGCTTCctc > 2:4822215/1‑140 (MQ=255) cGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCGTCCTATCGGCTTTTTTTCCGTGACGATTCGCTTCCTGGGTTCctcg > 2:528782/1‑139 (MQ=255) gTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTAt < 2:1212485/140‑1 (MQ=255) gCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGCTTCGCTTACTGGCTTCCTCTATTGa > 2:2447727/1‑140 (MQ=255) ttCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCGTGCCGCTTCGCTTCCTGGCTTCCTCGATTgttt > 2:6569475/1‑137 (MQ=255) ttCAATGACAGTGCCGGTCACAAGGTCTGAGTTCTCCGCACACTAGAAAGCGCTAATCCGGGCGATATCCTCGCCTGTGCCAGAGCTTCCTATCGGCGTTTTTTCCTTTCCGATGCGCTTCATGGCTTCCGGGATTGATg > 2:5754876/1‑140 (MQ=255) tCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTCCTGGCTTCCGCTAGTGATGc > 1:5646825/1‑140 (MQ=255) gTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGGTTCCGCTATTGATGcgtccttcct > 1:6176656/1‑138 (MQ=255) gTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTGCTTTCCGATTCGCGTCCTGGCTTCCTCTAGTGATGcttcctggat > 1:1043724/1‑136 (MQ=255) gTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCTGGCCGATTCGCATCCTGTCTTCCTCTATTGATGCTTCCGTCAt > 1:1738388/1‑140 (MQ=255) gTGCCTGTCACAAGGACTGAGATCTCCTCACACAATAAAGCCATAAACCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGAGTTTTTTCCTGGCCCATTCGCTTGCTGGCTTCCTCTCTTGGTGCGTCCGTCAt > 2:7143604/1‑140 (MQ=255) gCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCTTCCTGGCTTCCTCTATTCATGCTTCCTTCATGt < 2:6242284/140‑1 (MQ=255) ccTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGCTCTTCCTATCGGCGTTTTTTCCTTTCCGATTCGCTTCCTGGCTTCCTCTATTGTTTGTTCCTTCATGTc > 2:7664417/1‑140 (MQ=255) ccTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCTTGCCGATTCGCTTCCTGGCTTCCGCGATTGATGCTTGCGTCATGTc > 1:4473019/1‑140 (MQ=255) tCACAAGGTCTTAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTGTTCCTTTCAGATTAGCTTCCAGGCTTACTATATTTATTATTCCTTCATGTCGCCg > 1:1821959/1‑140 (MQ=255) tCACAAGGTCTGAGTTCTCCTCACACAAGAACGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTGTTGCTTGCCGCTTCGCGGCCGGGCTTCCTCTTTTGATGCGTGCGTCATGTCGGCg > 1:6400421/1‑140 (MQ=255) tCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTGCTTCATGTCGCCg > 1:7040509/1‑140 (MQ=255) cacaAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATACTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGa < 2:4672907/140‑1 (MQ=255) cacaAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATACTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGa < 2:2879834/140‑1 (MQ=255) cacaAGGTCTGAGTTCTCCGAACACCAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGa < 2:5403884/140‑1 (MQ=255) aaGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCCATTGGCGTACTGGGTGCCGCTAGTGTTTGTTCGGAGAGGTCGCCGACaa > 1:594994/1‑140 (MQ=255) aaGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTACTGGCTTCCTCTATTGATGCTTACTTCATGTAGCCCAcca > 1:239142/1‑138 (MQ=255) aGGTCTGAGTTCTCCTCACACCAGAAAGCGATACTCCGGGCGATATCCTCGCCTGTGCCAGATCGTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAAt < 1:6973085/140‑1 (MQ=255) aGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAAt < 1:6876685/140‑1 (MQ=255) aGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAAt < 2:5854929/140‑1 (MQ=255) aGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAAt < 1:911652/140‑1 (MQ=255) ggTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTGCTGGCGTCCTCTATTGATGCTTCCTTAATTTCGCCGACCAtt > 2:6427005/1‑139 (MQ=255) ggTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATg > 2:3698069/1‑140 (MQ=255) ggTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCGTTCCGATTCGCTTCCTGGCGTGCGCTATTGATGCTTCCTTCCTTTCGCCGACAATg > 1:5134204/1‑140 (MQ=255) tGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTTCCGATTAGCTTACTTGGTTGCTCTATTGATGCTTCCATCAAGTCGCCGACAAtttaac > 1:4321362/1‑135 (MQ=255) tctcCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCggg < 1:3942962/140‑1 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCGTACTGGCGTCCTCTATTGATGCTTCCTTCATGTCGCCGACAAAGTCACCCCGGCa > 1:6746247/1‑140 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATTCTTCCTTCATGTCGCCGACAATGTCACCCGGGCa > 2:4498900/1‑140 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTGTCTGGCTTCCTCTAATGAAGCTTCCTTGAATGCGCCGAAAATTTCACCCGGGCa > 1:7413798/1‑140 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTCCTTGCTTCCGCTATTTATTCTTCCATCATGTGGCCCACCAAGTCACCCCGGcc > 1:1170303/1‑139 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCGTGCCGATTCGCGTACTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAAAGTCACCCGGGCa > 1:5906666/1‑140 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTACTTGCCGATTCGCTTCCTGGCTTCCGCTATTGATGCTTCCTTCAATTAGCCGACAATGTCACCCCGGCa > 1:3567279/1‑140 (MQ=255) cctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCaa > 2:533639/1‑140 (MQ=255) tcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAAc < 1:1938052/140‑1 (MQ=255) acacaAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGTGTCCTGGCTTCCTCTATTGATGCTTCCTTCAAGTCGCCGACAATGTCACCCCGGCAAACCa > 1:4981070/1‑140 (MQ=255) acacaAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCGTCCTCTATTGATGGTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAAccc > 2:352178/1‑139 (MQ=255) aaGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGtt < 2:4976661/140‑1 (MQ=255) aGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGAACATGTCACCCGGGCAAACCATGTTg > 2:3837461/1‑140 (MQ=255) aaaGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCCTGTCGCCGACAATGTCACCCGGGCAAAACATGTTGGc > 2:1166249/1‑140 (MQ=255) gATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTGCTTGGCGATTCGCGTGCTGGGTTGCGCGATTGTTGCTTCCTTCATGTCGGCGCCAATGTCACCCGGGCCCACGATGTTgggcgttt > 1:374255/1‑134 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCTTCCTGGGTTGCGCTATTGTTGCTTACTTCAATTGGCCGCCAAAGTCACCCGGGCAAACCAAGTTGGCAGTTATTCCGAAtt > 1:819569/1‑140 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCCAATCTCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAAAGTCACCCCGGCCAACCATGTTGGCAGGTAGGCCGAAtt > 2:3580247/1‑140 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCATTGCCGAATAGCGTCCAGGCTTCCGCTAATGATTCTTACATAATGTCGCAGACAAAGTCACCCGGGCAAACCATGTTAGAAGTTATGCCCAAtt > 2:1943235/1‑140 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTGCATTGCGAATCGCTTGCTTGCTTACTGTATTGATTCTTCCGTCATTTCGCCGCCAAAGTCACCCCGGCAAACCAAGTTTGGAGTTATGCCGAAtt > 1:977607/1‑140 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCTTGCCGATTCGCTTCCTGGGTTGCTCTATTGATGCTTCCGTCAAGTCGCCGACAAAGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAAtt > 1:3515482/1‑140 (MQ=255) gATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTCCATGCGTCCGCTATTGATTCCGCCTTCATTTCGCCGACAATGTCACCCCGGCACACCATGGTTGCCGTTATGGCGAATTAgg > 1:3448583/1‑140 (MQ=255) gATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTGCTTGCCGATTCGCTTGCTGGCGTGCTCTATTGATGGGTCCTTGATGGCGCCGACAAAGTCACCCGGGCAAACCAAGTTGGGAGGTATTCCGAATTCgg > 1:407797/1‑140 (MQ=255) ctatCCTCGCCTGTGCCAGATCGTCCTATCGGCGTTTTGTCCGTGCCGATGCGCTTCCTGGCTTCCTCTAGTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATCCCGAATTCGGc < 2:2806978/139‑1 (MQ=255) atatCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGc < 2:7388297/140‑1 (MQ=255) atatCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGc < 2:7421898/140‑1 (MQ=255) atatCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGc < 1:6569475/140‑1 (MQ=255) tatCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTAGCTTCCTGGCTTCCGCTATTGATGCTTCCGTCATGTCGCCGTCCAGGTCACCCGGGCAAACCCTGTTGGGAGTTATGGCGAATTCGGct > 2:3935959/1‑140 (MQ=255) cGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTTCCGATTCGCTTCCTGGCGTCCTCTATTGATGCTTCCTTCATGTCGCCGACAAGGTCACCCGGGCAAACCAAGGTGGCAGTTATGCCCAATTCGGCTTCTTca > 2:1659708/1‑140 (MQ=255) cGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTTCCGATTCCCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCCACAAAGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAAATCGGCTTCTTca > 2:5091350/1‑140 (MQ=255) cGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTCTTGATGCGTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTca < 2:2831210/140‑1 (MQ=255) cGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTca < 2:4635072/140‑1 (MQ=255) cGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCAACCGGGCAAACCAAGTTGGCAGTTATTCCGAAATCGGcttattaa > 2:4014800/1‑138 (MQ=255) cGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCATGCCGATTCGCTACCTGGCTTCCTATATTGATTCTTCCATCAAGTCCCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATTCCCAATTCGGCttcttcc > 2:1381363/1‑139 (MQ=255) gCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaa < 1:4649628/140‑1 (MQ=255) gCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaa < 1:2663613/140‑1 (MQ=255) tgCCAGATCTTCCTATCGGCGTTTTTTTCTTGCCGTTTAGCTTCCTGGCTTCGTCGATTGATTCGTCCGTCCTGTGGCCGACCATGTCCCCCGGGGAAACCCTGTTGGCGGTTATTCCGAATTCGGCGTGTTcaaaggca > 1:5472112/1‑140 (MQ=255) tgCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTGCTCTATTGCTGCTTCCGTCATGTCGCCGACAATGGCACCCGGGCCACCCATGTTGGCCGGGATGCCGAATTCGGCTTCGTcaatggcc > 2:1481091/1‑139 (MQ=255) tgCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTCCTGGCTTCCTCTATTTTTGGTTCCTTCATGTGGCCCACAATGTGACCCCGGCAAACCAGGTTGGCAGTTATTGCGAAATCGGCTTCTTaaaatgca > 1:5339630/1‑135 (MQ=255) tgCCAGATCTTCCTATCGGCGTTTTTTACTTGCCGATTCGCTTCCTGGGTTCCTCTATTGATGCTTCCTTCATGTCGCCCACAATGTCACCCGGGCAAACCATTTTGGCAGTTATGCCGAATTCGGCGTCTTcaatggca > 2:1883262/1‑140 (MQ=255) tgCCAGATCTTCCTATCGGCGTTGTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCGTCCGTCATGTCGCCCACAATGTCACCCCGGCAAACCAAGTTGGCAGTTATGCCGAATTCGGCTTCGTaaatggca > 2:4248866/1‑140 (MQ=255) gCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaatggcaa < 2:6489328/140‑1 (MQ=255) gCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaatggcaa < 1:1473797/140‑1 (MQ=255) gCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaatggcaa < 1:3203193/140‑1 (MQ=255) gCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaatggcaa < 2:2657676/140‑1 (MQ=255) gATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGt < 2:7002434/140‑1 (MQ=255) tCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCg < 2:6652407/140‑1 (MQ=255) ccTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCGTCCTCGATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCCTGTTGGCAGTTATTCCCAATTCGGGGTCATAAATTGCAAATGTCTTAGt > 2:6912237/1‑140 (MQ=255) aTCGGCGTTTTTTCCTTGCCGATTCCCTTCCAGGCTTCCTCTAATGATGCTTCCTTCATGTCGCCCACAATGTCACCCCGGCAAACCATGTTGGCAGTTATGCCGAAATCGGCTTCTTCCATGGCAATGGTCTTCGTCaa > 2:7094263/1‑140 (MQ=255) tCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCaaa < 1:2605747/140‑1 (MQ=255) ttttttCCTTGCCGATTCGCTTCCTGGCTTCCTCTAGTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGcc < 1:2081371/140‑1 (MQ=255) tCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAAcc < 1:2861892/140‑1 (MQ=255) ttCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAACGAAGCCAAACCCACTTTCGCa < 1:1607366/140‑1 (MQ=255) ttCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCa < 1:214824/140‑1 (MQ=255) cTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCAgcgc > 2:2952764/1‑140 (MQ=255) ttCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCAGCGcc < 1:3109282/140‑1 (MQ=255) ttCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCAGCGcc < 1:6646621/140‑1 (MQ=255) ttCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCAGCGcc < 1:7131083/140‑1 (MQ=255) | GACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCAGCGCCAAATGCC > NZ_CP034943/2812651‑2812928 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |