BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,410	C→G	5.7%	P85A (CCA→GCA)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,410	0	C	G	5.7%	332.8 / 2.4	124	P85A (CCA→GCA)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base C (37/78); new base G (7/2); total (44/80)
Fisher's exact test for biased strand distribution p-value = 9.58e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 168 total aligned reads displayed.

GGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGC  >  NZ_CP034943/607271‑607549

gggAGCCACCGGACCTACCGGGGAAGCCGGACCAGCCGGAGCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagccggac                                                                                                                                             <  2:799913/140‑1 (MQ=255)

    gCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCGCCCGGACCAACCGGAGCGACGTGAGCGACTGGAGAACGAGGCCACGACGGACCAGCCGGACCAAc                                                                                                                                         >  1:1883310/1‑140 (MQ=18)

    gCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGTGCCACGGGAGCTACCGGGGCagccggaccagccggacctcc                                                                                                                                         >  1:3297403/1‑137 (MQ=255)

       aCGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCgg                                                                                                                                      <  1:27325/140‑1 (MQ=255)

       aCGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCgg                                                                                                                                      <  1:2986822/140‑1 (MQ=255)

         gggAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACTGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCggag                                                                                                                                    <  1:2384538/140‑1 (MQ=255)

         gggAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggag                                                                                                                                    <  1:155410/140‑1 (MQ=255)

            aGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcga                                                                                                                                 <  1:962354/140‑1 (MQ=255)

              cTACGGGCGAAGCCGGCCCAGCCGGACCCCCGGGAGCGACAGGAGCGACAGGGGAACCCGGACCAGCCGGCCCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgaca                                                                                                                               <  2:2282838/140‑1 (MQ=17)

              cTACCGGGGCAGCTGGACCAGCCGGAGCGCCGGGCGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgaca                                                                                                                               <  2:1247941/140‑1 (MQ=255)

              cTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgaca                                                                                                                               <  1:552723/140‑1 (MQ=255)

                aCCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacagg                                                                                                                             >  2:2542418/1‑140 (MQ=255)

                aCCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacagg                                                                                                                             <  1:3256273/140‑1 (MQ=255)

                     ggAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcga                                                                                                                        <  1:382870/140‑1 (MQ=255)

                      gacgCTGCACCAGCCTGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                                                                                                                       <  2:923287/137‑1 (MQ=255)

                      gAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                                                                                                                       <  1:608432/140‑1 (MQ=255)

                      gAAGCTGGACCAGCCGGACCGACGGGAGCGACAGGAGCTACCGGTGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGTAGACACGGGAGCTACCGGGGAAGCCGGACAAGCCGGACCAACCggagcgacaggagcgac                                                                                                                       <  1:898824/140‑1 (MQ=18)

                      gAAGCTGGACCACCCGGAGCGACGGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                                                                                                                       <  2:3373796/140‑1 (MQ=255)

                       aaGCTGGACCAGCCGGAGCGACGGGAGCGTCAGGAGGTACGGGGGCAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGAGCAGCCGGACCACCCggagcgacaggagcgaca                                                                                                                      <  2:2681953/140‑1 (MQ=17)

                       aaGCGGGACCAGCCGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgaca                                                                                                                      <  2:3494242/140‑1 (MQ=255)

                              aCCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTa                                                                                                               >  1:3143230/1‑140 (MQ=255)

                                  gCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGCGCGACCGGAGCTACCgg                                                                                                           >  2:2167663/1‑140 (MQ=255)

                                   ccGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCCACTGGGGCCACGGGAGCTCCCGGGCCAGCCGGACCGCCCGGAGCTACCGGGGCGACAGGACCGGCAGGAGCTACCggg                                                                                                          >  1:542751/1‑140 (MQ=14)

                                    cGGAGCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGTCCAGCCGGACCAACCGGCGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCGACAGGAGCTACCgggg                                                                                                         <  2:2469287/140‑1 (MQ=255)

                                             gggAGCGACAGGAGCTACCGGTGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                <  1:3409675/140‑1 (MQ=255)

                                             gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                <  1:2507056/140‑1 (MQ=255)

                                             gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                <  1:2307597/140‑1 (MQ=255)

                                                 gCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                            <  1:1999393/140‑1 (MQ=255)

                                                    cccggAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCCACGGGAGCCACGGGAGCTACCGGGTAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCTACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                         <  1:562192/137‑1 (MQ=17)

                                                         aGCGACCGGGGCCCCCGGTCCAGCCGGACCATCCGGAGCGACGTGAGCCACGGTAGCTACCGGGGCAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcga                                                                                    <  2:546956/140‑1 (MQ=17)

                                                             aCCGGGGAAGCCGGACCAGCCGGAGCAACGGGAGCGACGGGAGCCACCCGAGCTACCGGCGAAGCGGGAGCAGCGGGAGCGACGGGAGCGACAGGAGCGTCCGGAGCTCCCGGGGCAGCCGGACCAGCGggagcggccgg                                                                                >  2:1569572/1‑135 (MQ=11)

                                                             aCCGGGGAAGCCGGACCAGCCGGACCCACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCGGGAGCAACCGGAGAGACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCGCCggagcgcccgg                                                                                >  2:3343508/1‑135 (MQ=14)

                                                             aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCTACCGGTGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAGCGggagcgacagg                                                                                >  2:1624827/1‑140 (MQ=14)

                                                             aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCGGCCggggcgaccgg                                                                                >  2:2525647/1‑140 (MQ=255)

                                                             aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacagg                                                                                >  2:1486115/1‑140 (MQ=255)

                                                             aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACCGGCGCTACCGGGGAAGCCGGACCAGCCGGACCGACCGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAGCCggagcgacagg                                                                                >  2:2626135/1‑140 (MQ=14)

                                                             aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGAAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCggagcgacagg                                                                                >  2:1353504/1‑140 (MQ=255)

                                                             aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCCCCCGGAGCTACCGGGGAAGCCGGACCAGCCGCACCAACCGGAGAGACAGGAGCGACCGGAGATACAGGGGACTCCGGACCAGCCggcgcgacagg                                                                                >  2:1052538/1‑140 (MQ=14)

                                                             aCCGGGGAAGCCGGACCAGCCGGACCAACAGGAGCGACCGGAGCCACGGGAGCTACCGGGCAAGCCGGACCACCCGGACCACCCGGAGCGACAGGAGCGACCGGAGCTACCGGGGAAGCGGGACCAGCCggagcgacagg                                                                                >  2:358611/1‑140 (MQ=14)

                                                                  gcaccccggcccacccggaccaCCCGGAGCCACGGGAGCCACGGGAGCTCCCGGGGAAGCCGGACCAGCCGGCCCAACCGGAGCGACCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCCGCCggagcgacaggagcga                                                                           <  2:541335/135‑1 (MQ=17)

                                                                   gAAGCCGGACCAGCCGGACCCACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgac                                                                          >  2:499247/1‑140 (MQ=255)

                                                                   gAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTCCCGGGCACGCCGGACCAGCCGCACCAACCGGAGCGCCAGGCGCGCCAGGAGCTACCGGGGGCGCCGGCCCCGCCggagcgccgggggcgcg                                                                          >  1:3165668/1‑138 (MQ=14)

                                                                   gAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGACGCCGGAGCAGCCGGACCAACCGGAGCGACCGGAGCGACAGGACCTACGGGGGCCGCCGGACCGGCGggagcgaggggagcgag                                                                          >  2:1860719/1‑139 (MQ=14)

                                                                   gAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCAACCGGAGCGACAGGAGCGCCAGGAGCTACCGGGGACGCCGGACCAGCCggagcgacaggagcgcc                                                                          >  1:3375075/1‑138 (MQ=255)

                                                                   gAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgac                                                                          >  2:854369/1‑140 (MQ=255)

                                                                    atcccggaccagccggacctCCCGCGCCGACGGGAGCCACGGGAGCTACCGGGGCACCCGGACCAGCCGGACCCCCCGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgaca                                                                         <  2:1785676/137‑1 (MQ=17)

                                                                      gccggaccagccggaccaCCCGGTGCGACGGGAGCCACGGGAGCTACGGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                                                                       <  1:2846119/140‑1 (MQ=255)

                                                                      gccggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                                                                       <  1:1944172/140‑1 (MQ=255)

                                                                       ccggaccagccggaccaCCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagga                                                                      <  1:531550/140‑1 (MQ=255)

                                                                        cggcccagccgtaccaTCGGGAGCGAAGGGAGCCACGGGAGCTACCGGTGAACCCGGACCAGACGGACCACCCGGAGCGACTGGAGCGACAGGAGCTACCGGTGAAGCCGGACCAGCCggagcgacaggagcgacaggag                                                                     <  2:3253261/140‑1 (MQ=17)

                                                                        cggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCggagcgacaggagcgacaggag                                                                     >  1:3297434/1‑140 (MQ=255)

                                                                        cggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggag                                                                     >  1:1671949/1‑140 (MQ=255)

                                                                          gaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcg                                                                   >  2:3485986/1‑140 (MQ=255)

                                                                          gaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcg                                                                   >  2:17317/1‑140 (MQ=255)

                                                                            gcagccggaccaGCCGGCTCGCCGGGAGCCACGGGAGCTACCGGGGAAGCCGGCCCAGCCGGACCAACCGGAGCGACTGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                 <  2:3854340/139‑1 (MQ=17)

                                                                            ccagccggaccaCCGGGAGCGCCGGGAGCCACGGGAGCTACGGGGGAAGCGGGACCAGCGGGACCAACCGGAGCGATCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                 <  1:1384881/140‑1 (MQ=17)

                                                                                ccggaccaCCCGGACCCACGGCACCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGCACCACCGGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaggagcgacaggagcgacagga                                                             <  2:1710457/140‑1 (MQ=17)

                                                                                ccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaagagcgacaggagcgacagga                                                             >  2:1532644/1‑140 (MQ=255)

                                                                                        aCCGGAGGGACGCGAGCGACTGGTCCTTGCGTCTAAGCCGCACCACCCGTAGCTCCCGGAGCGAAAGGAGCGACAGGAGCTACCGGGTAAGCCGGACCAGCCGGAGCGACAGGAGCGACTGGAGCGACAGGAGCTACCgg                                                     <  1:2459078/140‑1 (MQ=9)

                                                                                        aCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCgg                                                     <  1:2512224/140‑1 (MQ=255)

                                                                                         cccccgcgcCGGGAGCCACCGCCCCCACCGCGCAAGCCCCACCAGCCGCACCCACCGGAGCGACTGGAGCGACAGGCCCTACCGGGGAAGCGGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCggg                                                    <  2:2946627/135‑1 (MQ=14)

                                                                                         ccGGAGCGACGGGAGCCTCGGGAGCGACCGGGGAAGCCGGACCAGCCGGCCCAACCGGAGCGACAGGAGCGACAGGCGCTACCGGGGTAGCCGGCCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCggg                                                    <  2:2413181/140‑1 (MQ=17)

                                                                                             cgcgcCGGGAGCCACTGGAGCTACCGGCGCCGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACGGGGGCCGCCGGCCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                                <  2:2748966/139‑1 (MQ=14)

                                                                                             cgCGACCGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACTGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                                <  2:341828/139‑1 (MQ=11)

                                                                                             aGCTACTGGAGCCACGGGACCTACAGGGGTTGTAGGACCAGCCGGACCAACCGGAGCCACAGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGAGCGACAGGAGAGACAGGAGCGACAGGAGCTACCGGGGAAg                                                <  2:2733102/140‑1 (MQ=17)

                                                                                              gCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCGCCCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCAGGAGCGACAGGAGCGCCGGGAGCTCCCGGGGACGc                                               >  2:2536939/1‑140 (MQ=14)

                                                                                               cccccggagcccCCGGACCGACCGGCGCAGCCGGACCAGCCGGACCAACCGGAGCGACcggagccacaggcgctccgggggacgcgggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacg                                              <  2:1003996‑M1/135‑83 (MQ=255)

                                                                                                 ccgggctccACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCATCCGGAGCCACAGGAGCCACTGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACTGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTgg                                            <  2:2998144/133‑1 (MQ=14)

                                                                                                 ccGGGCGCCACGGGAGCTACCGGCGAACCCGGACCAGCCGGACCAACCGGCGCGACTGGAGCCACTGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCCTCCGGAGCGACTGGAGCCACAGGAGCTACCGGGGAAGCTgg                                            <  2:1834940/139‑1 (MQ=11)

                                                                                                   gggAGCCACTGGAGCTCCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACTGGAGCTACCGCGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGAc                                          <  2:3834498/140‑1 (MQ=255)

                                                                                                    ggAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                                                                       >  2:1095673/1‑110 (MQ=255)

                                                                                                          ccGGGAGCCACAGGGGCAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTgg                                   <  2:3083111/139‑1 (MQ=255)

                                                                                                             ggAGCACCCGGCGCACCCGGACCAGCCGGACGCCCGGGAGCGAGGGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGc                                <  2:2953730/140‑1 (MQ=11)

                                                                                                                gCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACgggagccacaggggctactggggacgtcggaccagccgg                                                                                         >  2:2042047‑M1/1‑41 (MQ=255)

                                                                                                                   aCCGGGGAAGCCGGACCAGCCGGACCTACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACAGGACCCACAGGAGCATCCGGGGAAGCTGGACCACCCGGAGCGAcccg                          >  2:2326506/1‑137 (MQ=14)

                                                                                                                   aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACCGGAGAGACCGGAGCTACCGGGGAAGCAGGCCCAGCTGGAGCGACggg                          >  1:871318/1‑140 (MQ=14)

                                                                                                                    ccGGTGAACCCGGACCCGCCGGACCCACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGa                         <  2:2342602/140‑1 (MQ=14)

                                                                                                                    ccGCGGACGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGa                         <  2:1105459/140‑1 (MQ=255)

                                                                                                                         gcagcgggaccagccggaccAACCGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                    <  2:2036389/138‑1 (MQ=255)

                                                                                                                         gAAGCCGGACCAGCCGGACCAACCGGAGCGCCAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                    <  1:2631928/140‑1 (MQ=255)

                                                                                                                         gAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                    <  1:1077947/140‑1 (MQ=255)

                                                                                                                         gAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                    <  1:1486115/140‑1 (MQ=255)

                                                                                                                            gccggaccagccggaccaCCCGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAgg                 <  1:1524458/140‑1 (MQ=255)

                                                                                                                            gccggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAgg                 <  1:2129284/140‑1 (MQ=255)

                                                                                                                            gccggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACAGGCGCTACAGGAGAAAGCGGGGACGCTCGAGCAGACGGATCTCCGCGAGCGagaga                 >  1:158715/1‑139 (MQ=14)

                                                                                                                            gccggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCAACCGGTGAACCCGGAGCAGCCGGAGCGACAGGAGCGCCCGGCGGGCCAGGAGCAACCGGGGCGGCGGGACCACCGGGGGCGGCGGGcgcggccgg                 >  1:2719976/1‑135 (MQ=9)

                                                                                                                              cggggaagccggaccaaccggaGCGACgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccacccggagcgacgggagccacaggggctactggggacgtcggac               <  2:2078315‑M1/134‑114 (MQ=255)

                                                                                                                              cggggaagccggaccaaccggaGCGACgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggac               <  2:3127013‑M1/134‑114 (MQ=255)

                                                                                                                               ggggaagccggaccaaccggAGCGACgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccaca                                     <  2:2712959‑M1/112‑92 (MQ=255)

                                                                                                                               ggggaagccggaccaaccggAGCGACgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccaca                                     >  1:103663‑M1/6‑26 (MQ=255)

                                                                                                                                   ccgccggaccaacCGGAGCGACgggagccaccggcgctaccggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagcc          <  2:743145‑M1/138‑119 (MQ=255)

                                                                                                                                    agccggaccaCCCGGAGCCACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCg         <  1:1635015/140‑1 (MQ=255)

                                                                                                                                    agccggaccaACCGGAGCGACAGGACCGACAGGAGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCg         <  1:3434920/140‑1 (MQ=255)

                                                                                                                                    acccggaccaCCCGGAGCGACAGGAGCCACAGGAGCTACGGGGGAAGCCGGACCAGCCGGACCTACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCg         <  1:670266/138‑1 (MQ=14)

                                                                                                                                      gcggaccaCCCGGAGCGACAGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCggg       <  2:2198154/139‑1 (MQ=255)

                                                                                                                                      ccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGAGCGACCGGCGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCggg       >  1:2096652/1‑140 (MQ=255)

                                                                                                                                          accaACCGGAGCGACgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcga   >  2:94252‑M1/1‑15 (MQ=255)

                                                                                                                                          accaACCGGAGCGACgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccaca                                     <  1:2369387‑M1/106‑92 (MQ=255)

                                                                                                                                          accaACCGGAGCGACgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccaca                                     >  2:2369387‑M1/1‑15 (MQ=255)

                                                                                                                                           ccaACCGGAGCGACgggagccacaggggcgactggggacgacggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgac  <  1:823629‑M1/140‑127 (MQ=255)

GGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGC  >  NZ_CP034943/607271‑607549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`