| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 892,198 | G→A | 5.4% | P283P (CCG→CCA) | EO946_RS04510 → | iron ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 892,198 | 0 | G | A | 5.4% | 669.9 / 18.1 | 205 | P283P (CCG→CCA) | EO946_RS04510 | iron ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (66/127); new base A (5/6); total (71/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.46e-01 | |||||||||||
Only 100 of 205 total aligned reads displayed.
TTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCGCAAGAAG > NZ_CP034943/892065‑892335 | ttGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTcc < 2:2160019/140‑1 (MQ=255) tgtgATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCg < 2:1555631/140‑1 (MQ=255) tgtgATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCg < 2:877554/140‑1 (MQ=255) tgtgATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCg < 2:2461994/140‑1 (MQ=255) tgtgATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCg < 2:865407/140‑1 (MQ=255) cACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCTCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTg > 2:2783940/1‑140 (MQ=255) tcatGCTTGCAGGGTCCGCTGTCGCCATTGCCGGGCCGATTTCTTTTATCGGCATCATTATTCCGCATTTTGCCCGCTTTGTCGTTGGTAATGATTATCGCTGGGTTCTGCCATTTTCCGCTGTTTTGGGTGCCATTTTg > 1:3245297/4‑140 (MQ=255) tcatGCTTGCAGGGTCCGCTGTCGCCATTGCCGGGCCGATTTCTTTTATCGGCATCATTATTCCGCATTTTGCCCGCTTTGTCGTTGGTAATGATTATCGCTGGGTTCTGCCATTTTCCGCTGTTTTGGGTGCCATTTTg > 1:1546164/4‑140 (MQ=255) tcatGCTTGCAGGGTCCGCTGTCGCCATTGCCGGGCCGATTTCTTTTATCGGCATCATTATTACGCATTTTGCCCGCTTTGTCGTTGGTAATGATTATCGCTGGGTTCTGCCATTTTCCGCTGTTTTGGGTGCCATTTTg > 1:3826605/4‑140 (MQ=255) ttgcttgcCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTAGTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCt < 2:2425325/140‑1 (MQ=255) ttGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCt < 1:1819554/140‑1 (MQ=255) cTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGt < 2:1013346/140‑1 (MQ=255) aGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAg < 1:2951714/140‑1 (MQ=255) cGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAgctg > 2:3248522/1‑140 (MQ=255) cGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAgctg > 1:249953/1‑140 (MQ=255) gggTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAgctgc < 2:3094522/140‑1 (MQ=255) gggTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAgctgc < 2:196850/140‑1 (MQ=255) gggTCTGCGGTCGCACGTGCCGGGCCGATTTCATTGAGTGGCATCATTAGTCCGCCTGGTGGCCGATTTATCGGCGGCAATGAGTATCGTTGGGTTCTGCCGTTTTCCGCTGTTGTGGGTGCGATTGTGCTTGTAgctgc < 2:678233/140‑1 (MQ=255) cGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCgggg < 1:2142820/140‑1 (MQ=255) gCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGgc > 1:890173/1‑140 (MQ=255) cAATTGCGGGGCCGATTTCATTTATTGTCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTGGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGgcg < 2:1634990/140‑1 (MQ=255) cAATTGCCGGTCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGgcg < 2:3541/140‑1 (MQ=255) cAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGgcg < 2:3005719/140‑1 (MQ=255) tGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGAt > 2:480787/1‑140 (MQ=255) gCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGAtt > 2:3162434/1‑140 (MQ=255) gCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGAtt < 1:2799539/140‑1 (MQ=255) gCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGAtt < 1:2190692/140‑1 (MQ=255) ggCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGtttt < 1:1208833/94‑1 (MQ=255) ggCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGtttt > 2:1208833/1‑94 (MQ=255) ggCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGGTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATc > 1:3048083/1‑140 (MQ=255) ctaTTTCATTTATTGGCATCATTATTCCGCATTTTGCACGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCTCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCAtt < 1:685837/138‑1 (MQ=255) cGATTTCATTTATGGGCATCATTAGTCCGAATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTACGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCAtt < 1:2807772/140‑1 (MQ=255) aTTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTAt < 2:1721054/140‑1 (MQ=255) aTTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTAt < 2:1461280/140‑1 (MQ=255) ttCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATAGGGGCGCGATTTATCATTATGc > 1:2051681/1‑140 (MQ=255) tttATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCa > 2:3217195/1‑140 (MQ=255) aTTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGa > 2:3828311/1‑140 (MQ=255) tGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAg > 1:583587/1‑140 (MQ=255) tGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAg > 1:1505290/1‑140 (MQ=255) catcatTATTCCGCATTTTGCCCGATGTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTc < 2:1355986/140‑1 (MQ=255) atcatTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTa < 2:2997895/118‑1 (MQ=255) atcatTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCa < 2:3266247/131‑1 (MQ=255) atcatTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCa > 1:3266247/1‑131 (MQ=255) atcatTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTcc > 2:3377375/1‑140 (MQ=255) ttattCCGCATTTTGCCCGATTGATCGTCGGCAATGATTATCGGTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTGTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTc < 1:2088660/140‑1 (MQ=255) gaTTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCAt < 2:1283655/139‑1 (MQ=255) cATTTTGCCCGATTTATCGTCGGCACTGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCAt > 2:2247416/1‑140 (MQ=255) cATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCAt < 2:3155213/140‑1 (MQ=255) cATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCAt > 1:1069608/1‑140 (MQ=255) cATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCAt > 1:504096/1‑140 (MQ=255) cATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCAt < 2:2568403/140‑1 (MQ=255) cATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCGTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCAt > 1:732524/1‑140 (MQ=255) cATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTGTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCAt > 1:3078577/1‑140 (MQ=255) ttttGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGa < 2:2043751/140‑1 (MQ=255) ttgtGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGa < 2:201945/137‑1 (MQ=255) tttGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCt < 1:3667248/114‑1 (MQ=255) tttATCGTCGGCACTGAGTATCGTTGGGTTCTGCCGTTTTCCGCTGTCTTGGGTGCGATTTTGCTTGTAGCTGCTGAGATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCcatcat < 2:3479708/140‑1 (MQ=255) tttATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCcatcat < 2:1069876/140‑1 (MQ=255) tATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCg < 1:2879594/140‑1 (MQ=255) tATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCg < 1:3389198/140‑1 (MQ=255) tATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCg < 1:1352545/140‑1 (MQ=255) tATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCg < 1:3734908/140‑1 (MQ=255) tATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCg < 1:1283358/140‑1 (MQ=255) tcgtcgGCCATGATTATCGTTGGGTTCTGCCGTTTTCGGGTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTTATCTCGGGGCGCGTTTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGACATGACAGCAATCATCGGt < 2:3010056/140‑1 (MQ=255) tcgtcgGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGt < 1:3491655/140‑1 (MQ=255) tcgtcgGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGt < 1:1245223/140‑1 (MQ=255) tcgtcgGCAATGAATATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGt < 2:1651588/140‑1 (MQ=255) cgGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGc < 1:3682157/140‑1 (MQ=255) cgGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGc < 1:1861842/140‑1 (MQ=255) ggCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGcc > 1:2698490/1‑140 (MQ=255) ggCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGcc < 2:2959564/140‑1 (MQ=255) ggCAATGATTATCGTTGGGTTCTGCCGTTTTCAGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGATGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGcc > 1:2612595/1‑140 (MQ=255) gaaTGATTATCGTGGGGGTCTGCCGTTTTCCGCTGTTTTGGGTGCGAGTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATGATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTAGGCCtg < 2:3063355/139‑1 (MQ=255) cAATGATTTTCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCTCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATTCCtg < 2:896538/140‑1 (MQ=255) cAATGATTATCGTTGGGTTCTGCCTTTTTCCGCTGTATTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCtg < 1:2375525/140‑1 (MQ=255) cAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCtg < 1:1767345/140‑1 (MQ=255) cAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCtg < 2:203245/140‑1 (MQ=255) cAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCtg < 1:773985/140‑1 (MQ=255) cAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCtg < 1:2235690/140‑1 (MQ=255) aTGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCtgtg < 2:3602918/140‑1 (MQ=255) aTCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTtgtg < 2:1505290/140‑1 (MQ=255) aTCGTTGGGTTCTGCCGTTTTCCGCTGTGTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTtgtg > 1:1979242/1‑140 (MQ=255) cGTTGGGTTCTGCCGTTTTCCTCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTa < 2:2309213/140‑1 (MQ=255) cGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTa > 2:695281/1‑140 (MQ=255) cGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTa < 2:504096/140‑1 (MQ=255) cGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTa < 2:3851864/140‑1 (MQ=255) gggTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGcc < 1:1137260/110‑1 (MQ=255) gggTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGcc > 2:1137260/1‑110 (MQ=255) ggTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCg > 1:230823/1‑140 (MQ=255) ggTTCTGCCGGTTTCCGCTGTTTGGGGTGCGATTTTGCTTGTAGCTGGTGATATCGGGGCGCGTTTTCGCATTATGCCTCAGGGAGGTCGTGTCGGGGGCTTGTCAGCCATCATCGGTCTGGCTGGGTGTGGGTACCTCg > 2:623022/1‑140 (MQ=255) ttCTGCCATTTTCCGCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCa < 2:3826596/140‑1 (MQ=255) ttCTGCCATTTTCCGCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCa < 2:1546164/140‑1 (MQ=255) cTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCGCaag < 2:1190195/140‑1 (MQ=255) cTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCGCaag < 2:249953/140‑1 (MQ=255) tGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCGCacga > 2:2334749/1‑140 (MQ=255) tGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCGCa < 1:2990115/137‑1 (MQ=255) ccGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCGCaagaag < 1:2468284/140‑1 (MQ=255) ccGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCGCaagaag < 2:453566/140‑1 (MQ=255) ccGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCGCaagaag < 1:3367067/140‑1 (MQ=255) ccGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCGCaagaag < 1:1412192/140‑1 (MQ=255) | TTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGGGTTCTGCCGTTTTCCGCTGTTTTGGGTGCGATTTTGCTTGTAGCTGCTGATATCGGGGCGCGATTTATCATTATGCCTCAGGAAGTTCCTGTCGGGGCCATGACAGCCATCATCGGTATGCCTGTGTTTGTGTACATCGCAAGAAG > NZ_CP034943/892065‑892335 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |