| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,170,453 | A→C | 5.5% | K312N (AAA→AAC) | EO946_RS06025 → | carbamoyl phosphate synthase large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,170,453 | 0 | A | C | 5.5% | 787.3 / 2.7 | 314 | K312N (AAA→AAC) | EO946_RS06025 | carbamoyl phosphate synthase large subunit |
| Reads supporting (aligned to +/- strand): ref base A (117/163); new base C (2/32); total (119/195) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.79e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 318 total aligned reads displayed.
GGCTAGTCTGACGATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCACTGGACTATGTCATCGTCAAATTTCCGC > NZ_CP034943/1170315‑1170592 | ggCTAGTCTGACGATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAg > 2:3585723/1‑140 (MQ=255) tAGTCTGACGATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGa < 2:3803067/140‑1 (MQ=255) tAGTCTGACGATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAAAATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGa < 2:816820/140‑1 (MQ=255) gTCTGACGATCATCTCAGCACTTTATGTCGTTGGGGGCTGAAAAATTCAATACGCGGTGGATCCATTCCGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGAcc < 1:3549644/140‑1 (MQ=255) gTCTGACGATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCAATTCAGAAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGAcc < 2:734943/140‑1 (MQ=255) aCGATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCACTATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTa > 1:3591850/1‑140 (MQ=255) aCGATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTa > 1:1460756/1‑140 (MQ=255) aCGATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTa > 1:3769642/1‑140 (MQ=255) aCGATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTa > 2:122494/1‑140 (MQ=255) tatcatcTCAGCACTTGATGTCTTAGGCGGCTGCAACATTCATTTCGCGCTGTATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATc < 2:2199654/139‑1 (MQ=255) gATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATc > 2:3297770/1‑140 (MQ=255) gATCATCACAGCACTTGATGTCGTAGGCGGATGCAACATTCAATACGCGCTGCATCAATTCACAACGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAACGCGACCGGTTATc < 1:1426296/140‑1 (MQ=255) catcTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGa > 2:1986415/1‑140 (MQ=255) atcTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGAt > 1:2881029/1‑140 (MQ=255) atcTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGAt > 1:1005166/1‑140 (MQ=255) cTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTTAAGTCAATCCGGGTGTAAGCCGTTCATCGGCTCTCGCTTCTAAAGAGACCGGTTATCCGATTGCGAAGAt < 2:292772/140‑1 (MQ=255) cTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGAt < 1:1798547/140‑1 (MQ=255) ttGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATg > 1:3428286/1‑140 (MQ=255) gATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGc > 1:3107779/1‑140 (MQ=255) gATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGc > 1:715479/1‑140 (MQ=255) gTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGc > 2:376227/1‑140 (MQ=255) gTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGc > 2:1903060/1‑140 (MQ=255) cGTACGCGGCTGCAACATTCAATTAGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAATCCGGTCATCGGCTCTCGCCTCTAAAGCGACCGGTTATCCGATTGCGAAGATCGCTGCaa > 2:3162680/1‑140 (MQ=255) tAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAGGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCaaaa > 2:2502360/1‑140 (MQ=255) tAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCaaaa > 2:1611754/1‑140 (MQ=255) aGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAAc > 2:3666289/1‑140 (MQ=255) gggcTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTgg < 1:1663823/139‑1 (MQ=255) cggcTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTgg < 1:3872238/140‑1 (MQ=255) gcTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGAGTGCGAAGATGGCTGCAAAACTGGCa < 2:459769/140‑1 (MQ=255) cTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAg > 2:1013092/1‑140 (MQ=255) cTGCAACATTCAATTCGCGCGGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAg < 2:2030395/140‑1 (MQ=255) tGCAACATTCACGTCGCGCGCGATCCATTCAGCAAGCAATATTATGTCATTGAACTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGt < 2:2137945/140‑1 (MQ=255) tGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGt < 1:2820672/140‑1 (MQ=255) tGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGt < 1:3698555/140‑1 (MQ=255) tGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGt < 1:898540/140‑1 (MQ=255) tGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGt < 2:1078218/140‑1 (MQ=255) tGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGt < 2:904935/140‑1 (MQ=255) tGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGt < 1:1903134/140‑1 (MQ=255) tGCAACATTCAATTCGCGCTGGATCAATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGt < 1:127789/140‑1 (MQ=255) aTTCAATTCGCGCTGTATCCATTCAGAAAGCAATATTATTTCATTGAAGTCAATCCGCTTGTAAGCCGGTCATCGGCTCTCGCGTCTAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGata < 1:2495155/140‑1 (MQ=255) aTTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGata < 1:1531613/140‑1 (MQ=255) aTTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGata < 2:2801256/140‑1 (MQ=255) aTTCAATTCGCGCTGGATCCATTCAGCAAGAAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGata < 2:3849014/140‑1 (MQ=255) aTTAAATTCGCGCTGGATCCATTCAGCAAGAAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGata < 1:2298100/140‑1 (MQ=255) tCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGAtata > 1:2948539/1‑140 (MQ=255) cAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATAc < 1:1382134/140‑1 (MQ=255) cAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATAc < 1:224798/140‑1 (MQ=255) ttCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCt > 2:1770415/1‑140 (MQ=255) cgcgCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTtg < 2:191476/140‑1 (MQ=255) cgcgCTGGATCCATTCAGCAACCAATATTATGTCATTTACGACAATCCGCGTGTAAGCCGGTAATCGGCTCTCGCGAATAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTtg < 1:2650395/140‑1 (MQ=255) cgcTGGATCCATTCAGCAAGCAATATTATTTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTtgat < 2:1955975/140‑1 (MQ=255) cgcTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTtgat > 2:396827/1‑140 (MQ=255) gcTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTtgatg > 2:3057896/1‑140 (MQ=255) caagcaaTATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGc > 2:2744264/1‑140 (MQ=255) attatGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGt < 1:1716634/140‑1 (MQ=255) attatGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGt < 1:2341235/140‑1 (MQ=255) attatGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGt > 1:503006/1‑140 (MQ=255) attatGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGt > 1:2061754/1‑140 (MQ=255) tCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACt > 1:772338/1‑140 (MQ=255) cATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTcac > 1:614948/1‑129 (MQ=255) cATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTcac > 1:2913773/1‑129 (MQ=255) cATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTcac < 2:614948/129‑1 (MQ=255) ttGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTAc > 1:2168580/1‑140 (MQ=255) ttGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTAc > 2:284100/1‑140 (MQ=255) tGAAGTCAATCCGCGTGTAAGCCGTTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACg < 2:1426420/140‑1 (MQ=255) gTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAg > 2:2938696/1‑140 (MQ=255) gcttttAAGCCGGTCATCGGCTCACGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAAc < 2:2371383/135‑1 (MQ=255) gcgTGTAAGCCGTTCATCGGCTCTCGCGTCTAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAAc < 1:122694/140‑1 (MQ=255) gcgTGTAAGCCGGTCATCGGCTCTCGCGTCTAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAAc < 1:1576892/140‑1 (MQ=255) gcgTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAAc < 1:1937725/140‑1 (MQ=255) gcgTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAAc < 1:982248/140‑1 (MQ=255) gcgTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAAc < 1:2772685/140‑1 (MQ=255) gcgTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAAc < 2:3019123/140‑1 (MQ=255) gcgTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCACTCACAGGTTCGACTTACGCAAGCTTTGAAc < 2:342521/140‑1 (MQ=255) gcgTGTAAGCCGGTCATCGGCTCTCGCGTATAAAGCTACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAAc < 1:2434448/140‑1 (MQ=255) ttaGCCGTTCATGGGCTCTCGCGTCTAACGCGCCCGGTTATCCGATTGCTAAGATGGCTGCAAAACTGGCAGTCGTATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGAGTTACGCAAGCTTTGAACCTGCa < 2:3539667/138‑1 (MQ=255) tatgCCGGTCATCGGCTCTCGCTTATAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 1:562874/137‑1 (MQ=255) tacgCCGGTCATCGGCTCTCGCGTCTAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 2:1562674/137‑1 (MQ=255) tAAGCCGGTCATCGGCTCTCGCGTCTAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAATCTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 2:3078966/140‑1 (MQ=255) tAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGTTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 2:2591873/140‑1 (MQ=255) tAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 1:3297770/140‑1 (MQ=255) tAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 1:1968419/140‑1 (MQ=255) tAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 1:25797/140‑1 (MQ=255) tAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 1:2864550/140‑1 (MQ=255) tAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 1:3057896/140‑1 (MQ=255) tAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 1:3080592/140‑1 (MQ=255) tAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTGATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 2:535085/140‑1 (MQ=255) tAAGCCGGTCATCGGCTCGCGCGTCTAACGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 2:1170844/140‑1 (MQ=255) tAAGCCGGTCATCGGCTATCTCGACTAAAGGGACCGGTTATCCGATTTCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCGTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTAAGCAAGCTTTGAACCTGCa < 1:2743127/140‑1 (MQ=255) tAAGCCGGTAATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACACTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCa < 2:1658414/140‑1 (MQ=255) aaGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCAc < 2:2877892/140‑1 (MQ=255) ggTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCACTGGAc > 1:798592/1‑140 (MQ=255) gTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCtt < 2:2887954/123‑1 (MQ=255) gCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCACTGGACTATGTCAt < 1:1179939/140‑1 (MQ=255) tAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCACTGGACTATGTCATCGTCAAATTTc > 2:3708175/1‑140 (MQ=255) tAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCACTGGACTATGTCATCGTCAAATTTc > 2:2621693/1‑140 (MQ=255) tAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCACTGGACTATGTCATCGTCAAATTTc > 1:3000221/1‑140 (MQ=255) tAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCACTGGACTATGTCATCGTCAAATTTc > 1:104629/1‑140 (MQ=255) tAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACATGCACTGGACTATGTCATCGTCAAATTTc > 1:1084147/1‑140 (MQ=255) aGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCACTGGACTATGTCATCGTCAAATTTCcgc > 1:3160664/1‑140 (MQ=255) | GGCTAGTCTGACGATCATCTCAGCACTTGATGTCGTAGGCGGCTGCAACATTCAATTCGCGCTGGATCCATTCAGCAAGCAATATTATGTCATTGAAGTCAATCCGCGTGTAAGCCGGTCATCGGCTCTCGCGTCTAAAGCGACCGGTTATCCGATTGCGAAGATGGCTGCAAAACTGGCAGTCGGATATACCCTTGATGAGCTGAAAAATCCGCTCACAGGTTCGACTTACGCAAGCTTTGAACCTGCACTGGACTATGTCATCGTCAAATTTCCGC > NZ_CP034943/1170315‑1170592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |