| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,215,179 | A→C | 5.7% | K81N (AAA→AAC) | thiF → | thiazole biosynthesis adenylyltransferase ThiF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,215,179 | 0 | A | C | 5.7% | 754.7 / 3.6 | 297 | K81N (AAA→AAC) | thiF | thiazole biosynthesis adenylyltransferase ThiF |
| Reads supporting (aligned to +/- strand): ref base A (161/105); new base C (2/29); total (163/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.65e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 297 total aligned reads displayed.
GGAACAGCGAGTGCTGAAATGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATCATTGTGGATGCGGCTGA > NZ_CP034943/1215042‑1215310 | ggAACAGCGTGTGCTGAAATGCTGGTAAGAGCGGGAGTTGGCTCTGTGAAATTTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGc < 2:1477745/140‑1 (MQ=255) agggAGTGCTTAAATGGTGGTCTTAGCGGGAGTTGGCTTTTTGAAAATTGCCTACATAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGAAGCTGTATACAGAAGATGATGTAAGAAAATAAATACCCAACGCGGCcg < 1:2748497/137‑1 (MQ=255) aGCGAGTGCTGAAATGCTGGTCAGCGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAAGGGAGCAACCTGCAGCGCCAGCAGCTTTATACAGAAGATGATGTCACAAAAGAAATACCGAAAGCGGCcg < 1:191351/140‑1 (MQ=255) aGCGAGTGCTGAAATGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGTTGTCAGAAAACAAATACCGAAAGCGGCcg < 2:3425721/140‑1 (MQ=255) cGAGTGCTGAAATGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCcgcg > 1:1211279/1‑140 (MQ=255) cGAGTGCTGAAATGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCcgcg > 1:1717484/1‑140 (MQ=255) gAGTGCTGAAATGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCgg > 2:1058077/1‑140 (MQ=255) gAGTGCTGAAATGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCgg > 2:1217615/1‑140 (MQ=255) gTGCTGAACTGCTGGTCAGAGCGGGCGTGGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCACCCTGCCGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAACAAATCCCGAACGCGGCCGCGGCt < 1:1418040/140‑1 (MQ=255) gCTGAAATGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGa > 2:1187493/1‑140 (MQ=255) gAAATGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCa > 2:2728607/1‑140 (MQ=255) gAAATGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCa > 2:1384826/1‑140 (MQ=255) aaTGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATc > 2:1920421/1‑140 (MQ=255) tCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATGACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAACTACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGt < 2:1164621/140‑1 (MQ=255) agCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCAGCGTCTCCGTTCGa > 1:2455053/1‑140 (MQ=255) gAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAAc > 1:1341797/1‑140 (MQ=255) ttGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAACGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGc < 2:2005188/140‑1 (MQ=255) ggCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGcga > 1:2889230/1‑140 (MQ=255) ggCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGcga > 1:2010327/1‑140 (MQ=255) ggCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGcga > 2:2590414/1‑140 (MQ=255) ggCTCGGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTCTACAGAAGATGATGGCAGAACAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCGCCGTTCGATTAACTGcga > 2:619993/1‑140 (MQ=255) gCTCTGTGAAAATTGCCGACAGAGATTCCGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTAAACACAAGATGATGACAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGcgat < 1:1489138/140‑1 (MQ=255) gCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGcgat < 1:2677449/140‑1 (MQ=255) tgtgAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGcgatgtcg > 2:3345637/1‑140 (MQ=255) tgtgAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGcgatgtcg > 1:3614380/1‑140 (MQ=255) gACAGATATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCt < 1:2248824/140‑1 (MQ=255) gACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCt < 2:2464239/140‑1 (MQ=255) gACAGAGATTACGTTGAAGGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAACGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCt < 1:1403756/140‑1 (MQ=255) gagaTTTCGGTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATCCAGAAGCTGATGTCAGAAAAGAAATACCGAAAGCGGGCGGGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGtt < 1:973678/140‑1 (MQ=255) gagaTTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATCCCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGtt < 1:1869395/140‑1 (MQ=255) cagaTAACGTTCATTGGAGCAACGTGCAGCGCCAGCAGCTGTATCCAGACGATGAGGTCAGAAACGAAATACCGAAAGCGGCCGCGGCTGAGCAGCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGtt < 1:3357806/139‑1 (MQ=255) tGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAATAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGa < 1:1164121/140‑1 (MQ=255) gAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGAc > 2:840250/1‑140 (MQ=255) aaTGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGACAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGGTATGGATGTGAct > 1:1000841/1‑139 (MQ=255) aaTGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACa > 1:558679/1‑140 (MQ=255) aGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGa > 1:1196454/1‑140 (MQ=255) aGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGa > 2:3743065/1‑140 (MQ=255) aGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGa > 2:1895220/1‑140 (MQ=255) ccTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAata > 1:2313893/1‑140 (MQ=255) ccTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAata > 1:3219910/1‑140 (MQ=255) aGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGt > 2:2811662/1‑77 (MQ=255) aGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCt < 2:3769558/109‑1 (MQ=255) aGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTc > 1:514644/1‑140 (MQ=255) aGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTc > 1:2540149/1‑140 (MQ=255) aGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTGCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTc > 1:3792406/1‑140 (MQ=255) cgcCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAACGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGa < 1:1259886/140‑1 (MQ=255) gcCAGCAGGTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:154860/140‑1 (MQ=255) gcCAGCAGCTTTATACATAAGATTATGTCATAAAAGAAATACCGACCGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:266009/140‑1 (MQ=255) gcCAGCAGCTTTATACAGAAGATTATGTCACAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:249636/140‑1 (MQ=255) gcCAGCAGCTTGATCCAGCAGTTGCTGACAGAACCCAAATCCCCACCGCGGCCGCGGCTGAGCATCGTCTCCGTTCGAGTAACAGCGATGTCGATGTGACTGGCCTTGTTAGGGATGTGCCAGCGGAAAATATCTTCGAg < 1:2246892/140‑1 (MQ=255) gcCAGCAGCTGTCTCCTGAAGATGATGTCAGAAAAGAAAGACCGACCGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:2618172/140‑1 (MQ=255) gcCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAACGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:1125132/140‑1 (MQ=255) gcCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAACGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGGGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 2:1529490/140‑1 (MQ=255) gcCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATTGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:1058077/140‑1 (MQ=255) gcCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 2:68417/140‑1 (MQ=255) gcCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:3748775/140‑1 (MQ=255) gcCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:1673876/140‑1 (MQ=255) gcCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:3689300/140‑1 (MQ=255) gcCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:3227563/140‑1 (MQ=255) gcCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:3112778/140‑1 (MQ=255) gcCAGCAGCTGTATACAGAAGATGATGACAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 2:2517543/140‑1 (MQ=255) gcCAGAAGCTGTATACAGAAGATTTTCTCATAAAAGAAATCCCGAACGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg < 1:3310470/140‑1 (MQ=255) cagcagCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCt > 2:3054508/1‑140 (MQ=255) cagcagCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCt > 2:639593/1‑140 (MQ=255) agcagcTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTg > 1:47101/1‑140 (MQ=255) agcTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGAtt > 2:3851895/1‑140 (MQ=255) tataCAGAAGATGATGTCAGAAAAGAACTACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTACGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAggg < 2:1661896/140‑1 (MQ=255) aCAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGgcgc < 2:3600798/140‑1 (MQ=255) cAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCt < 2:2325095/140‑1 (MQ=255) cAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCt < 2:2121311/140‑1 (MQ=255) agaagaTGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCtt > 2:444505/1‑140 (MQ=255) agaagaTGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCtt < 2:514644/140‑1 (MQ=255) gaagaTGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTc > 1:1774801/1‑140 (MQ=255) aagaTGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGcgat > 1:184879/1‑71 (MQ=255) aagaTGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGACAATATCTTCGAGCTGATTAAGGGCGCTTCg > 1:1330098/1‑140 (MQ=255) aagaTGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAg > 1:294264/1‑122 (MQ=255) aagaTGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCg > 2:1780513/1‑140 (MQ=255) aagaTGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCg > 1:3532861/1‑140 (MQ=255) aagaTGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCg > 1:2368293/1‑140 (MQ=255) aagaTGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCg > 1:3154462/1‑140 (MQ=255) aagaTGATGTCAGAAAAGAAATACCGAAACCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCg > 1:713200/1‑140 (MQ=255) gatgatGTCAGAAAAGAAATACCGCAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGAt < 1:2203986/140‑1 (MQ=255) gatgatGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGAt > 1:2122965/1‑140 (MQ=255) atgatgTCAGAAAAGAAATACCGACAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATc > 2:1835306/1‑140 (MQ=255) atgatgTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTTTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGAGGTGACAGCGGAAAATATCTTCGAGCTGATGAAGGGCGCTTCGATc > 2:3701939/1‑140 (MQ=255) atgatgTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGt < 2:2388952/53‑1 (MQ=255) atgatgTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGt > 1:2388952/1‑53 (MQ=255) atgatgTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGc > 1:1215517/1‑83 (MQ=255) atgatgTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATc > 2:169996/1‑140 (MQ=255) atgatgTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATc > 1:1063417/1‑140 (MQ=255) atgatgTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATc > 1:2994518/1‑140 (MQ=255) atgatgTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATc > 1:785656/1‑140 (MQ=255) gatgTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATCAt > 2:940440/1‑140 (MQ=255) tgTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATCATtg > 1:2828792/1‑140 (MQ=255) cAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGcg < 1:867188/59‑1 (MQ=255) cAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATCATTGTgg > 2:2032266/1‑140 (MQ=255) gaaaagaaaTACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATCATTGTGGAt > 2:2993671/1‑140 (MQ=255) gaaaagaaaTACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATCATGGTGGAt > 2:1721146/1‑140 (MQ=255) gaaaagaaaTACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGAGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATCAGTGTGGAt > 2:3241017/1‑140 (MQ=255) aTACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATCATTGTGGATGCGGCTGa < 1:3054508/140‑1 (MQ=255) | GGAACAGCGAGTGCTGAAATGCTGGTCAGAGCGGGAGTTGGCTCTGTGAAAATTGCCGACAGAGATTACGTTGAATGGAGCAACCTGCAGCGCCAGCAGCTGTATACAGAAGATGATGTCAGAAAAGAAATACCGAAAGCGGCCGCGGCTGAGCATCGTCTCCGTTCGATTAACAGCGATGTCGATGTGACTGGCCTTGTTATGGATGTGACAGCGGAAAATATCTTCGAGCTGATTAAGGGCGCTTCGATCATTGTGGATGCGGCTGA > NZ_CP034943/1215042‑1215310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |