| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,900,793 | C→A | 6.5% | P118P (CCC→CCA) | EO946_RS14945 → | extracellular solute‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,900,793 | 0 | C | A | 6.5% | 658.5 / 3.3 | 254 | P118P (CCC→CCA) | EO946_RS14945 | extracellular solute‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (130/97); new base A (2/25); total (132/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.87e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 259 total aligned reads displayed.
ACTATGAAAATATGATGCGTGTCAGAATGGCAGCCAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGAAACCATGGATGA > NZ_CP034943/2900654‑2900927 | aCTATGAAAATATGATGCGTGTCAGAATGGCAGCCAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATccc < 2:520299/140‑1 (MQ=255) tATGAAAATATGATGCGTGTCAGAATGGCAGCCAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCaa > 2:1895136/1‑140 (MQ=255) tGAAAATATGATGCGTGTCAGAATGGCAGCCAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAAtt > 1:1146656/1‑140 (MQ=255) tatGATGCGTGTCAGAATGGCAGCCAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACa > 2:1075372/1‑140 (MQ=255) tgtCAGAATGGCAGCCAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCa > 1:1443333/1‑140 (MQ=255) gtCAGAATGGCAGCCAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCaa > 1:408787/1‑140 (MQ=255) cAGCCAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGc > 1:1214009/1‑140 (MQ=255) ccATTGATTTGCCTGAACTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGTAGAATATACAGCGTATCTCAGAGATAGGGGATGGACCCAAGATCTCTATCCAAATTTAAACAGCATCCTAAAAAATAAACGCGGc < 1:3643338/140‑1 (MQ=255) ccAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGc < 2:1214009/140‑1 (MQ=255) cattgttttGCCTGAATTTTTCTATACAAATGGGTGGTTAAAAATTAGGTATGGATAATATACAGGGGATCTCATAGATTTGTGATGGACCAAAGATCTCGATCCCAATTTAAACCGCATCCTAAAAAATAAAAGCGGCa < 1:2174032/134‑1 (MQ=255) cattGATTTCCCTTACCTTTTCTATACAAATGGCTGGGGAAAATTTTGTTATGTATAATATACAGCGTATATCAGATATTTGGTATTGACCAAATATCTCTATCCAAATTTAAAAACCAGCCTCAAAAATAAAAGCGGCa < 1:2919689/137‑1 (MQ=255) cactGATTTGCTTGACCTTTTCGATACACATGGATGGGTAAAATTTATTTATGGATAATATACAGCGGATCTCAGATTTATGTGATTTACCCAAGTTCTCGATCAAAATTTATACAGCATCCTAAAAAATAAAAGCGTCa < 2:2164004/137‑1 (MQ=255) caattttttGCCTGACATTTTCTATACAATTGGCTGGGTTAAATTTTGGTTTGTTTAATATACTGCTTATCTAAGAGTTTTGGGTTGTACAAAATATCTGTATCCAAATTTAAACAGCTTACTCAAAAATAAAAGCGGCa < 1:2036771/134‑1 (MQ=255) cAATTATTTGCCTGACCTTTTCGATACACATGGGTGGGGAAAAATTAGGTATGGACAATATACAGCGTATCTCAGAGATAGGGTTTGGACCCAAGATCTCGATCCCAATTTAAACACCATCATCAAAAATAAAAGCGGCa < 1:2652587/140‑1 (MQ=255) cAATGTTTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCAAAGATCTCGATCCAAATTTAAACAGCATCCTCAAAAATAAACGCGGCa < 2:2508219/140‑1 (MQ=255) cAATGATTTGCGTGACATTTTCTATAAAAATGGCTGGGGAAAAATTAGTTATGGAGAATATAAAGCGGATCTCAGAGATTTGGGATGGACCCAAGATCTCGATCCAAATTTAAACAGCATCCTCAAAAATAAAAGCGGCa < 2:2343363/140‑1 (MQ=255) cAATGATTTGCCTGACCTTTTCGATACACATGGCTGGTTAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCa < 2:2067395/140‑1 (MQ=255) cAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGTAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCa < 2:2695374/140‑1 (MQ=255) cAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGTTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCACAAAAATAAAAGCGGCa < 2:2595329/140‑1 (MQ=255) cAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCa < 2:3592291/140‑1 (MQ=255) aaaTTATTTGCCTTACCTTTTCTATAAAATTGGCTGGGTAAAAATTATTTTTGGACATTATACAGCGTATATCATTTATATGGGTTGGACCCAAGATCTCTATCCCAATTTAAACAGAATCCTCAAAAATAAAAGCGGCa < 1:330616/139‑1 (MQ=255) aaaTGAGTTGCCTGACCTTTTCGAAAAAAAGGGCGGGGTAAAAATTCGGCATGGATAATATACAGGGTATCTCAGACATAGGGGATGGACCCAATAACTCGATCCCAATTTAAACACCAACCTCAAAAAAAAACGCGGCa < 1:932531/139‑1 (MQ=255) aTTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGta < 2:855411/140‑1 (MQ=255) aTTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAAGAGACAGCGGATCTCAGAGATAGGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGta < 2:395462/140‑1 (MQ=255) tGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTatat > 2:828810/1‑140 (MQ=255) aCCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTAc > 2:79009/1‑140 (MQ=255) aCCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTAc > 2:1388183/1‑140 (MQ=255) ttCGATACACATGGCTGGGGAAAAATTATGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAAATCTCTATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGat > 2:1552598/1‑140 (MQ=255) ttCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGat > 1:1276800/1‑140 (MQ=255) tCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGatc > 2:1628477/1‑140 (MQ=255) tCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGatc > 1:2080783/1‑140 (MQ=255) tCGATAAACATTGATGGGGAAAAATTAGTTATGGAGAATATACATCGGATCTCAGAGATATGGGATTTACCCAAGATCTCGATCACAATTTAAACAGCATCCTCAAAAATAAAAGAGGAAAGCTATATACCTACCCGatc > 2:3214189/1‑140 (MQ=255) acaTGGCTGGGGAAAAATTTTTTATTGAGAATATACAGCGGATCTCAGAGATATGGTATGGACCAAAGATCTCTATCCAAATTTAAAAAGCATCATAAAAAATAAAATATTCAATTTATATTCATACCCGATCAATCAgg < 2:3486703/140‑1 (MQ=255) cTGGGGAAAAATTAGGTATGGATAATATACAGCGGATCTCAGAGATTTGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAg < 2:374206/140‑1 (MQ=255) tGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGa > 1:2541366/1‑140 (MQ=255) tGGGGAAAAATTAGGTATGGACAATATACAGCGGATCACAGAGATATGGGATGGACCAAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGa < 1:3796248/140‑1 (MQ=255) gggAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACg > 1:1044022/1‑140 (MQ=255) gggAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACg > 2:688906/1‑140 (MQ=255) gggAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACg > 1:1578050/1‑140 (MQ=255) gggAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACg > 1:3486703/1‑140 (MQ=255) aaaaaTTAGTTATGGATAATATACAGCGGATCTAATATATATGGTATGGACCCAAGATCTCGATCCCAATTTAAACACCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGcc < 2:1968743/140‑1 (MQ=255) aaaaaTTAGGTATGTATAATATACAGCGTATCTCAGAGATATGGTATGGACCAAAGATCTCGATCCAAATTTAAACAGAATCCTAAAAAATAAACGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGcc < 1:2310584/140‑1 (MQ=255) aaaaaTTAGGTATGGATAATTTACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCAAATTTAAACAGCATCCACAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGcc < 1:3825940/140‑1 (MQ=255) aaaaaTTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAATATCTCGATCCCAATTTAAACAGCAACCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGcc < 2:3344267/140‑1 (MQ=255) aaaaaTTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAACGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGcc < 2:2282980/140‑1 (MQ=255) aaaaaTTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGcc < 2:3098654/140‑1 (MQ=255) aaaaaTTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCAAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGcc < 2:3381925/140‑1 (MQ=255) aaTTAGTTATGGAGAATATACAGCGGATCTCAGAGATATGGGATTGACCCAAGATCTCGATCCAAATTTAAACCGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTgg < 1:2619508/140‑1 (MQ=255) aTTAGGTATGGAGAATATACAGCGGATCTCAGAGATAAGGGATGGACCAAATATATAGATCCCAATTTAAACAGCATCCACAAAAATAAAATCGGAAAGGTATATGACAAACCGAACAATCAGGCAAAATACTGCCTGGc > 2:2857261/1‑140 (MQ=255) ggTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCatat > 2:588785/1‑140 (MQ=255) ggAGAATATCCAGCGTATCTCATAGATATGGGATGGACCCACGATCTCGATCCCAATTAAAACCGCAACCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCg < 1:2858115/140‑1 (MQ=255) ggAGAATATACAGCGGATCTCAGAGCTATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCg < 2:2588261/140‑1 (MQ=255) ataaTATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCACGCAAAAGACGGCCTGGCATATAACCGCa < 2:2479991/138‑1 (MQ=255) ataaTATACAGCGCAGCTCAGAGATATGGGATGCACCCAATTTCTCGATCCAAATTTAAACCGCATCCTCAAAAATAAACGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCa < 2:219594/138‑1 (MQ=255) agaATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCa < 2:2800076/140‑1 (MQ=255) agaATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCa < 2:1830747/140‑1 (MQ=255) agaATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACACCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCa < 1:1885017/140‑1 (MQ=255) agaATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTGAAACAGCATCCTCAAAACTAACAGCGGCAAGCTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCa < 2:2231499/140‑1 (MQ=255) agaATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTAAAACAGCATCCACAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCa < 2:2800124/140‑1 (MQ=255) agaATATACAGCGGATCTCAGAGATATGGGATGGACCCAACATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCa < 2:1146656/140‑1 (MQ=255) ataCAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATAtt > 2:3254705/1‑140 (MQ=255) aGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTCCCCGATCAATCAGGCAAAAGACGGCCTGGCATAGACCCGCAATATTTTAg > 2:1482432/1‑140 (MQ=255) aGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAg > 1:2368285/1‑140 (MQ=255) aGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAg > 1:1649594/1‑140 (MQ=255) aGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAg > 1:595641/1‑140 (MQ=255) gCGGATCTCAGAGATATGGGATGGACCCCAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAACGACGGCCTGGCATATCACCGCAATATTTTAGa > 2:1723665/1‑140 (MQ=255) gCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGc > 1:2786258/1‑75 (MQ=255) gCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGa > 1:3012171/1‑140 (MQ=255) gCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCCATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGa > 2:413241/1‑140 (MQ=255) gCGGATCTCAGAGATAGGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAAAAACCGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGa < 1:3498190/140‑1 (MQ=255) cGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGAc > 1:3706472/1‑140 (MQ=255) ggATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCAGATAACCGCAATATTTTAGAcc > 2:1680668/1‑140 (MQ=255) aTCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGt > 2:2767039/1‑140 (MQ=255) aTCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGt > 2:1245469/1‑140 (MQ=255) aTCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGt > 2:3401015/1‑140 (MQ=255) aTCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGt > 2:1312090/1‑140 (MQ=255) ctcAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAACGCGGCAAGGTATATGCCTACCCGATCAGTCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTa < 1:672606/140‑1 (MQ=255) ctcAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCCGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTa < 1:3680881/140‑1 (MQ=255) gagaTATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAACAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGc < 1:2120970/140‑1 (MQ=255) tatGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTa > 2:2454637/1‑140 (MQ=255) tatGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTa > 2:1003662/1‑140 (MQ=255) tGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAAc > 2:3109801/1‑140 (MQ=255) tGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAAc > 1:173872/1‑140 (MQ=255) tGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAAc > 2:1107337/1‑140 (MQ=255) gATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTCCCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACccg > 1:2431293/1‑140 (MQ=255) gATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACccg > 1:3135503/1‑140 (MQ=255) gATGGACCCAAGATCTCGATCCAAATTTAAAAAGCATCCTCAAAAATAAAAGAGGCAAGGTATATGCCTAACCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTAAGTAATTAAAccg > 1:460724/1‑140 (MQ=255) gACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAATCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGGTACGGCATTAACCCGCCgg > 1:1947636/1‑140 (MQ=255) gACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTa > 1:1697493/1‑123 (MQ=255) gACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCgg > 1:2269685/1‑140 (MQ=255) aCCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGa > 2:2966390/1‑140 (MQ=255) aCCCAAGATCTAGATCCCAATTTAAACAGAATCCTCAAAAATAAAAGCCGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGa < 2:2541366/140‑1 (MQ=255) aaGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGAAAcc > 1:2487517/1‑140 (MQ=255) aGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGAAACCa > 2:1755947/1‑140 (MQ=255) aGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCAGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGAAACCa > 2:1342832/1‑140 (MQ=255) tcGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGAAACCATGGAt > 2:2140535/1‑140 (MQ=255) tcGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGAAACCATGGAt > 1:1515212/1‑140 (MQ=255) tcGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGAAACCATGGAt < 1:1808265/140‑1 (MQ=255) tcGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGAAACCATGGAt > 2:1455753/1‑140 (MQ=255) tcGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAAGATTTTAGACCGGTACGGCATTAACCCGCCGGAAACCATGGAt > 1:3772002/1‑140 (MQ=255) | ACTATGAAAATATGATGCGTGTCAGAATGGCAGCCAATGATTTGCCTGACCTTTTCGATACACATGGCTGGGGAAAAATTAGGTATGGAGAATATACAGCGGATCTCAGAGATATGGGATGGACCCAAGATCTCGATCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGCAAGGTATATGCCTACCCGATCAATCAGGCAAAAGACGGCCTGGCATATAACCGCAATATTTTAGACCGTTACGGCATTAACCCGCCGGAAACCATGGATGA > NZ_CP034943/2900654‑2900927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |