| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,169,618 | G→A | 5.3% | I63I (ATC→ATT) | EO946_RS16390 ← | carboxymuconolactone decarboxylase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,169,618 | 0 | G | A | 5.3% | 746.1 / 20.5 | 225 | I63I (ATC→ATT) | EO946_RS16390 | carboxymuconolactone decarboxylase family protein |
| Reads supporting (aligned to +/- strand): ref base G (104/108); new base A (6/6); total (110/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.83e-01 | |||||||||||
Only 100 of 225 total aligned reads displayed.
TGGCTAAGAGCCGCGCCGCCTCCAAATGCCGCTGCCACACTGACGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTG > NZ_CP034943/3169484‑3169752 | tGGCTAAGAGCCGCGCCGCCTCCAAATGCCGCTGCCACACTGACGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTcc > 1:277955/1‑140 (MQ=255) agagCCGCGCCGCCTCCAAATGCCGCTGCCACACTGACGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGc > 1:46540/1‑140 (MQ=255) ccgcgccgcCTCCAAATGCCGCTGCCACACTGACGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATc < 2:3255958/140‑1 (MQ=255) cgccgcCTCCAAATGCCGCTGCCACACTGACGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGc > 1:3238424/1‑140 (MQ=255) ccTCCAAATGCCGCTGCCACACTGACGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATCTTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGttt > 1:865149/1‑140 (MQ=255) gCTGCCACACTGACGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCAGTTTTTCTCTTtcagt < 2:2292691/140‑1 (MQ=255) tGCCACACTGACGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCGGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTtcagtca < 2:3161015/140‑1 (MQ=255) tGCCACACTGACGGCTTCGAGAATGATTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTtcagtca < 2:2948766/140‑1 (MQ=255) gACGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGc < 2:3399609/140‑1 (MQ=255) aCGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGACTTGcc > 1:3384591/1‑140 (MQ=255) aCGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGcc > 2:57689/1‑140 (MQ=255) cGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCg < 2:794287/140‑1 (MQ=255) cGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCg < 2:2625804/140‑1 (MQ=255) cTTCGAGAATGTTTTCTTCTGTCGCTCCCTCCTCAAGACAGCCTTGTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCa < 1:3803261/140‑1 (MQ=255) cTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCa < 1:1008263/140‑1 (MQ=255) cTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCa < 1:2245004/140‑1 (MQ=255) cTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGATTTTCTCTTTCAGTCAGAGAATTGCCGGCa < 2:3149092/140‑1 (MQ=255) cTTCGAGAATGTTGTCTTCTGGCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCa < 1:2142738/140‑1 (MQ=255) agaATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCa < 2:1499379/140‑1 (MQ=255) agaATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCa < 2:1632637/140‑1 (MQ=255) agaATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCa < 2:441164/140‑1 (MQ=255) agaATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCa < 2:1000811/140‑1 (MQ=255) agaATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCa < 2:3360650/140‑1 (MQ=255) agaATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCa < 2:466255/140‑1 (MQ=255) agaATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCa < 2:580568/140‑1 (MQ=255) agaATGTTGTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCa < 2:2825110/140‑1 (MQ=255) tgacGCTCCCTGATCAAGACAGCCTTTTGTATGATAGATCATGCAATATTCGTCCTGAGCATTGATGGCAATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTCCCGGCAAAGCACTGTTCAGTaaatt > 2:118320/4‑138 (MQ=255) tgacGCTCCCTGATCAAGACAGCCTTTTGTATGATAGATCATGCAATATTCGTCCTGAGCATTGATGGCAATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTCCCGGCAAAGCACTGTTCAGTaaatt > 2:3294339/4‑138 (MQ=255) cccTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTaaa > 1:2538360/1‑140 (MQ=255) cccTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTaaa > 1:827749/1‑140 (MQ=255) cTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACt < 2:736220/140‑1 (MQ=255) cTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACt < 2:1870855/140‑1 (MQ=255) cTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACt < 2:247996/140‑1 (MQ=255) cTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACt < 1:57689/140‑1 (MQ=255) aGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATc > 2:3033231/1‑140 (MQ=255) ccTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAg > 2:1244148/1‑140 (MQ=255) ccTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAg > 2:3634250/1‑140 (MQ=255) ccTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAg > 1:1165452/1‑140 (MQ=255) cTTTTGTGTGATAGAACATGCAATATTCATCCTGGGCATTGATTGCGATTCCGAGGGCGATACGCTGTTTTTCTCTTTCAGTCCGAGAATTGCCGGCAAAGCATTTTTCAGTAAACAAGTTAAAATTTCTTACCAtaacc > 1:3673997/1‑136 (MQ=255) tgtgATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAg > 2:1566487/1‑58 (MQ=255) tgtgATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAg < 1:1566487/58‑1 (MQ=255) gATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCAttttt > 2:2282816/1‑140 (MQ=255) gATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCAttttt > 2:3064127/1‑140 (MQ=255) gATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCAttttt > 2:2689450/1‑140 (MQ=255) gATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGAATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCAttttt > 2:2771356/1‑140 (MQ=255) cATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCa < 1:1308407/82‑1 (MQ=255) cATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCaa > 1:743228/1‑140 (MQ=255) tGCAATATTCCTCCTGTGCATTGAGGGCGTTTCCGAGGGCTATCAGCTGTTTGTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTGAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt < 1:2817644/140‑1 (MQ=255) tGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt > 1:1104363/1‑140 (MQ=255) tGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt < 2:2045147/140‑1 (MQ=255) tGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt < 2:2538360/140‑1 (MQ=255) tGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt > 1:2567652/1‑140 (MQ=255) tGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCACATCAGCGGCATTTTTTGTTCAAAt > 1:910901/1‑140 (MQ=255) tatTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGcc > 2:3679299/1‑140 (MQ=255) tatTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGcc > 2:2246218/1‑140 (MQ=255) atTCATCCTGGGCATTGATGGCGATTCCGAGTGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCTTGAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCt > 1:184736/1‑140 (MQ=255) atTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAATTGTGCCt > 1:1196056/1‑140 (MQ=255) atTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCt > 2:1607084/1‑140 (MQ=255) atTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCt < 2:2996581/140‑1 (MQ=255) atTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCt > 1:1220613/1‑140 (MQ=255) ttCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTa > 2:1336117/1‑140 (MQ=255) ttCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTa > 2:3259994/1‑140 (MQ=255) ttCATCCTGGGCATTGATGGCGATTCCGAGGGCGAGCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTa > 2:914983/1‑140 (MQ=255) aTCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTTTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCACCGGCAATATTTGTTCAAATGTGCCTAAAc > 2:1363679/1‑140 (MQ=255) aTCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAAc < 1:3707555/140‑1 (MQ=255) ccTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCa < 1:708158/73‑1 (MQ=255) ccTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCa > 2:708654/1‑73 (MQ=255) ccTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTaa > 2:2791181/1‑84 (MQ=255) gggCATTGTTGGCGATTCCGAGGGCGATCCGCTGTTTTTCTCTTTCTGTCAGAGACTGGCCGGCAAAGCCTTGTTCAGTCACCTCGTGATACTGTCTTCCCATCAGCGGCAGTTTTTGTTCATATGTGCCTAAACCTCAt > 1:3034869/1‑140 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGtt > 1:3345106/1‑120 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGtt > 1:2898590/1‑120 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGtt < 2:1437650/120‑1 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGtt > 1:1437650/1‑120 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAAt > 1:2501290/1‑140 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAAt > 1:2160210/1‑140 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAAt > 2:2878116/1‑140 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAAt > 1:2460193/1‑140 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTATTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCGTAAACCTAAt > 2:2084410/1‑140 (MQ=255) ggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAAtt > 1:2448444/1‑140 (MQ=255) gCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAAttt > 2:3432334/1‑140 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:758667/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:852428/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:3673997/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:1540715/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:2160210/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:3693780/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:2878116/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:2665899/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:1582319/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTGTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAATCTTTCTTCCCCTCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:950149/140‑1 (MQ=255) ttGATGGCGAGTCCGAGGGCGATCAGATGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:1246944/140‑1 (MQ=255) ttGATGGCAATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTCCCGGCAAAGCACTGTTCAGTAAATTCGTTAAATTTTCTTCCCATCAGCGGCATCTTTTGTTCAAATGTGCCTAAACCATGTTtata < 1:3294339/140‑1 (MQ=255) ttGATGGCAATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTCCCGGCAAAGCACTGTTCAGTAAATTCGTTAAATTTTCTTCCCATCAGCGGCATCTTTTGTTCAAATGTGCCTAAACCATGTTtata < 1:1616788/140‑1 (MQ=255) ttGAGGGCGATTCCGAGGGCGATCAGCTGTTTGTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:2201318/140‑1 (MQ=255) tGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATAc < 1:275894/140‑1 (MQ=255) gATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt < 2:1811026/118‑1 (MQ=255) gATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt < 2:1724706/118‑1 (MQ=255) gATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt > 1:1811026/1‑118 (MQ=255) gATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACt > 2:968990/1‑140 (MQ=255) aTGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTGAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCGTAAACCTACTTTATACtc > 2:3337409/1‑139 (MQ=255) | TGGCTAAGAGCCGCGCCGCCTCCAAATGCCGCTGCCACACTGACGGCTTCGAGAATGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTG > NZ_CP034943/3169484‑3169752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |