| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,169,675 | T→C | 5.3% | Q44Q (CAA→CAG) | EO946_RS16390 ← | carboxymuconolactone decarboxylase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,169,675 | 0 | T | C | 5.3% | 749.4 / 21.0 | 226 | Q44Q (CAA→CAG) | EO946_RS16390 | carboxymuconolactone decarboxylase family protein |
| Reads supporting (aligned to +/- strand): ref base T (108/103); new base C (6/6); total (114/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.08e-01 | |||||||||||
Only 100 of 226 total aligned reads displayed.
TGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATCCCTCCATCT > NZ_CP034943/3169539‑3169808 | tGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCACTCTTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGt > 2:1645815/1‑140 (MQ=255) gTTTTCTTCTGTCGCTCCCTCAGCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGACGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGtt < 1:1200065/140‑1 (MQ=255) ttctGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTaa < 1:2241903/140‑1 (MQ=255) ttctGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTaa < 1:2707445/140‑1 (MQ=255) tgacGCTCCCTGATCAAGACAGCCTTTTGTATGATAGATCATGCAATATTCGTCCTGAGCATTGATGGCAATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTCCCGGCAAAGCACTGTTCAGTaaatt > 2:3308511/4‑138 (MQ=255) gCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGtt < 2:2754649/140‑1 (MQ=255) cTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACt < 2:736220/140‑1 (MQ=255) cTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACt < 1:57738/140‑1 (MQ=255) cTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACt < 2:247996/140‑1 (MQ=255) cTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACt < 1:930388/140‑1 (MQ=255) aGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTcc > 1:2551954/1‑140 (MQ=255) aGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCCTTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATc > 1:154696/1‑140 (MQ=255) aGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATc > 2:1353215/1‑140 (MQ=255) aGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATc > 1:2446349/1‑140 (MQ=255) ccTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAg > 2:2292439/1‑140 (MQ=255) ccTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAg > 2:2971617/1‑140 (MQ=255) ccTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAg > 2:3634250/1‑140 (MQ=255) ccTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAg > 2:964640/1‑140 (MQ=255) ccTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAg > 1:2480495/1‑140 (MQ=255) ccTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAg > 1:1165452/1‑140 (MQ=255) tgtgtgATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATAAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCa > 2:2779843/1‑140 (MQ=255) gATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCAttttt > 2:2282816/1‑140 (MQ=255) gATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCAttttt > 2:90853/1‑140 (MQ=255) gATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGtt > 2:3293856/1‑140 (MQ=255) cATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCaa > 1:743228/1‑140 (MQ=255) tGCAATATTCCTCCTGTGCATTGAGGGCGTTTCCGAGGGCTATCAGCTGTTTGTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTGAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt < 1:2817644/140‑1 (MQ=255) tGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt > 1:3236017/1‑140 (MQ=255) tGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt < 2:827749/140‑1 (MQ=255) tGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt > 1:2567652/1‑140 (MQ=255) tGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt > 1:1104363/1‑140 (MQ=255) tatTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGcc > 2:2246218/1‑140 (MQ=255) atTCATCCTGGGCATTGATGGCGATTCCGAGTGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCTTGAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCt > 1:184736/1‑140 (MQ=255) atTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAATTGTGCCt > 1:1196056/1‑140 (MQ=255) atTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCt > 2:1401992/1‑140 (MQ=255) atTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCt > 2:1607084/1‑140 (MQ=255) atTCATCCTGGGCATTGAGGGCGATTCCGAGCGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGTCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCt < 2:2214053/140‑1 (MQ=255) ttCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCTTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTa > 2:3258899/1‑140 (MQ=255) ttCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTa > 2:1206975/1‑140 (MQ=255) ttCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTa > 2:2809925/1‑140 (MQ=255) aTCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAAc < 2:1167029/140‑1 (MQ=255) aTCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAAc < 1:3785849/140‑1 (MQ=255) aTCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAAc < 1:1401992/140‑1 (MQ=255) aTCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAAc < 2:61714/140‑1 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGtt < 2:2898590/120‑1 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGtt < 2:1437650/120‑1 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAAt > 2:2878116/1‑140 (MQ=255) gggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAAt > 2:1568102/1‑140 (MQ=255) ggCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAAtt > 2:2540674/1‑140 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAACCTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:3674428/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTCATTtata < 1:444730/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:1582319/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:25154/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:3027563/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:758667/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:2456922/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:3693780/140‑1 (MQ=255) ttGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 2:1540715/140‑1 (MQ=255) ttGATGGCGAGTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:899953/140‑1 (MQ=255) ttGATGGCGAGTCCGAGGGCGATCAGATGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTtata < 1:1246944/140‑1 (MQ=255) ttGATGGCAATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTCCCGGCAAAGCACTGTTCAGTAAATTCGTTAAATTTTCTTCCCATCAGCGGCATCTTTTGTTCAAATGTGCCTAAACCATGTTtata < 1:3308511/140‑1 (MQ=255) ttGATGGCAATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTCCCGGCAAAGCACTGTTCAGTAAATTCGTTAAATTTTCTTCCCATCAGCGGCATCTTTTGTTCAAATGTGCCTAAACCATGTTtata < 1:2879565/140‑1 (MQ=255) gATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt > 1:1811999/1‑118 (MQ=255) gATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAAt < 2:1811999/118‑1 (MQ=255) aTGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTGAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCGTAAACCTACTTTATACtc > 2:3337409/1‑139 (MQ=255) aTTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAg < 2:1997033/140‑1 (MQ=255) aTTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAg > 2:207965/1‑140 (MQ=255) ttCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAgc < 1:2125690/140‑1 (MQ=255) tCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGAATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAgct > 2:1774568/1‑139 (MQ=255) cGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGcgcg < 2:2448444/140‑1 (MQ=255) cGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGcgcg < 2:3236017/140‑1 (MQ=255) cGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTACACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGc > 1:2970563/1‑140 (MQ=255) gATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCa < 1:3030614/140‑1 (MQ=255) aTCAGCTGTGTTTCTCTTTCAGTCAGAGAAATGCCGGCAAAGCATTGTTCAGTAATCTCGTTAAACTTTCTTACCATCAGCGGCATTTTTTGTTCAAATGTGCCTATACCTAATTTATACTGCTTTAGCGCGTCCTGCAt > 2:938759/1‑140 (MQ=255) gTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCAtttt < 2:2096955/82‑1 (MQ=255) gTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCAtttt > 1:2096955/1‑82 (MQ=255) gTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCct < 1:1708254/140‑1 (MQ=255) gTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCct < 2:2166950/140‑1 (MQ=255) tttCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTg > 2:3138842/1‑140 (MQ=255) ctctTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCt > 1:39120/1‑140 (MQ=255) ctctTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCt < 1:841686/140‑1 (MQ=255) ctctTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTACCGCGTCCTGCATGCTTCCTCTGTCt < 2:1845381/140‑1 (MQ=255) ctctTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGACTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCt < 2:1252148/140‑1 (MQ=255) tcagtcagAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGAtt < 1:827589/140‑1 (MQ=255) tcagtcagAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGAtt > 1:1769604/1‑140 (MQ=255) agaATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGaaa < 1:2795760/140‑1 (MQ=255) agaATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGaaa > 1:3398891/1‑140 (MQ=255) tGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATccc > 2:3111872/1‑140 (MQ=255) tGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATccc > 2:2105040/1‑140 (MQ=255) tGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATccc > 2:3355711/1‑140 (MQ=255) tGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATccc > 2:1035931/1‑140 (MQ=255) tGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATccc > 2:3807300/1‑140 (MQ=255) tGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATccc > 2:395973/1‑140 (MQ=255) gCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATAGTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCATAGAAAATccgg > 1:2042285/1‑138 (MQ=255) cGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATCCCTcc < 2:1506328/140‑1 (MQ=255) ggCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATCCCTCCa < 2:1139523/140‑1 (MQ=255) gCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATCCCTCCAt < 1:3048101/140‑1 (MQ=255) gCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATCCCTCCAt < 1:3634250/140‑1 (MQ=255) gCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATCCCTCCAt > 1:3530361/1‑140 (MQ=255) gCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTGAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATCCCTCCAt < 2:2666017/140‑1 (MQ=255) aaaGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATCCCTCCATCt < 1:2665915/140‑1 (MQ=255) | TGTTTTCTTCTGTCGCTCCCTCATCAAGACAGCCTTTTGTGTGATAGATCATGCAATATTCATCCTGGGCATTGATGGCGATTCCGAGGGCGATCAGCTGTTTTTCTCTTTCAGTCAGAGAATTGCCGGCAAAGCATTGTTCAGTAAACTCGTTAAACTTTCTTCCCATCAGCGGCATTTTTTGTTCAAATGTGCCTAAACCTAATTTATACTGCTTTAGCGCGTCCTGCATGCTTCCTCTGTCTTGATTCAAAGAAAATCCCTCCATCT > NZ_CP034943/3169539‑3169808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |