| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,791,922 | T→G | 5.7% | E126D (GAA→GAC) | EO946_RS19535 ← | DNA‑3‑methyladenine glycosylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,791,922 | 0 | T | G | 5.7% | 935.2 / 7.7 | 401 | E126D (GAA→GAC) | EO946_RS19535 | DNA‑3‑methyladenine glycosylase |
| Reads supporting (aligned to +/- strand): ref base T (160/200); new base G (3/37); total (164/237) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.82e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 433 total aligned reads displayed.
TGCCGATGCGCGGGCCGGTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCACGT > NZ_CP034943/3791783‑3792061 | gccgatgcGCGGGCCGGTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCAtt > 1:361304/1‑140 (MQ=255) cgGGCCGGTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGAt > 2:353002/1‑140 (MQ=255) cgGGCCGGTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGAt > 2:3270609/1‑140 (MQ=255) cgGGCCGGTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGAt > 1:1677880/1‑140 (MQ=255) cgGGCCGGTTGAAAACTCTTCCGGTGTATACCCGCTTTCGATGTAAACCGGCTGTTACGTTAACCAGCGTCAGTAGTCATACAACGAGACGACAAGCTCTATCGTCAGATTTCCGGGCCCGTTTGTCCATTCCATCGGAt > 2:1841997/1‑140 (MQ=255) gggCCGGTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATg < 2:3384531/140‑1 (MQ=255) ggCCGGTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGc > 2:3122428/1‑140 (MQ=255) gCCGGTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTGTCCGGGCCCGTTTGTCCCTTCCCTCGGATGcc > 2:191378/1‑140 (MQ=255) ggTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGccggc < 1:3443862/140‑1 (MQ=255) gTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGccggcc > 2:3434172/1‑140 (MQ=255) gTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGccggcc > 2:2419919/1‑140 (MQ=255) ttCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCCAGCGCTTTCGTCAGCTTTCCGGGCCCGGTTGTCCATTCCCTCGGATGCCGGCCCGGCCTtctct > 2:3616814/1‑140 (MQ=255) ttCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTtctct < 1:2301631/140‑1 (MQ=255) ttCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTtctct > 1:2607902/1‑140 (MQ=255) ttCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTtctct > 2:1297120/1‑140 (MQ=255) ttCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTtctct < 2:751620/140‑1 (MQ=255) ttCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTtctct < 1:1030355/140‑1 (MQ=255) ccGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTctcc < 1:2348823/140‑1 (MQ=255) cGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTctcct < 2:3005812/140‑1 (MQ=255) cGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTctcct < 2:887282/140‑1 (MQ=255) tataCCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCAtt > 1:816573/1‑140 (MQ=255) tataCCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCAtt > 1:2486558/1‑140 (MQ=255) cGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCGCCTCCATTAACAGc < 2:695776/140‑1 (MQ=255) cTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCCTTCATCGTGACGACAATCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGCTGCCGGCCCGGCCTGCTCTCCTCCATTAACAGCTg > 2:1077839/1‑140 (MQ=255) cTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTg > 1:2230422/1‑140 (MQ=255) cTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTg > 1:1565879/1‑140 (MQ=255) cTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGCCCTTCTCTCCTCCATTAACAGCTg > 1:3138927/1‑140 (MQ=255) cTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCAAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCATCGGATGCCGGCCCGGCCTTCTCTCCTCCAATAACACCTg > 1:325836/1‑140 (MQ=255) ttCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGc > 1:1048707/1‑140 (MQ=255) ttCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGc < 1:1601996/140‑1 (MQ=255) ttCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGc < 1:306961/140‑1 (MQ=255) ttCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGc < 1:3296840/140‑1 (MQ=255) ttCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGc > 2:640524/1‑140 (MQ=255) tAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCAtt < 2:2159040/123‑1 (MQ=255) cTGTTCCGTGATCCAGCGTCCGTAGTCATTCAGCGTGACGCCAAGCGCTTTCGTCCGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCaa > 1:3662684/1‑140 (MQ=255) tCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGc > 1:99734/1‑140 (MQ=255) ccGTGCTCCCGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTCTCCGGGCCCGGGGGTCCAGTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACACCTGGCCGTCATGAGGCTCAATCGcc < 2:283372/140‑1 (MQ=255) ccGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCACGCGCTTTCGTCAGCTGTCCGGGCCCGTTTGTCCATTCCCGCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGcc < 2:3682197/140‑1 (MQ=255) ccGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGcc < 1:2541325/140‑1 (MQ=255) ccGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGcc < 1:175123/140‑1 (MQ=255) ccGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGcc < 2:1780500/140‑1 (MQ=255) ccGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGcc < 2:2510202/140‑1 (MQ=255) ccGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGcc < 1:1300482/140‑1 (MQ=255) ccGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTGTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGcc < 2:1695997/140‑1 (MQ=255) cGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGcc < 1:2151990/139‑1 (MQ=255) tGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCa > 1:1821720/1‑122 (MQ=255) tGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCa > 1:352504/1‑122 (MQ=255) tGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTg > 1:1265796/1‑140 (MQ=255) gCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATa > 2:30967/1‑140 (MQ=255) gCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCGCAATCGCCCTGATTAATa > 2:2691436/1‑140 (MQ=255) gTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCtt > 2:2656540/1‑140 (MQ=255) cattcatCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCggg < 1:1530910/140‑1 (MQ=255) attcatCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGc < 1:1133335/132‑1 (MQ=255) ttcatCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCaa > 2:381865/1‑112 (MQ=255) ttcatCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGac > 1:2832723/1‑140 (MQ=255) cGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCACTCGCCCGGGTTAATACCGCTTGCGGGACACCTg > 2:248989/1‑140 (MQ=255) cGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTg > 2:827445/1‑140 (MQ=255) tGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGcc > 2:1612953/1‑110 (MQ=255) tGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCt > 1:446788/1‑140 (MQ=255) aCGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGc > 2:2212633/1‑88 (MQ=255) aGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGc > 1:633920/1‑140 (MQ=255) cgcTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTCACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCaa < 1:2739404/140‑1 (MQ=255) cgcTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCaa < 1:954784/140‑1 (MQ=255) cgcTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCaa < 2:1133501/140‑1 (MQ=255) cgcTTTCGTCAGCTTTCCGGGCCCGTTTGTCCAGTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCaa < 2:2332295/140‑1 (MQ=255) cgcTGTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCaa < 1:3744192/140‑1 (MQ=255) tCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACa > 1:3487284/1‑140 (MQ=255) cGTCAGCGTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACAt < 1:2928025/140‑1 (MQ=255) gTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACAtt < 2:3198700/140‑1 (MQ=255) gTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCGGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACAtt < 2:52772/140‑1 (MQ=255) aGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAg < 2:1396173/140‑1 (MQ=255) aGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGATTGCGGGACACCTGCTTCTGCGGCAACGACATTCAg < 2:397299/140‑1 (MQ=255) ctgtCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGGCTTATCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCa < 1:1040192/137‑1 (MQ=255) cTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCa < 1:3544544/140‑1 (MQ=255) cTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCa < 1:3806332/140‑1 (MQ=255) cTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCa < 1:384495/140‑1 (MQ=255) cTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCa > 1:1974750/1‑140 (MQ=255) cTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCa < 1:687093/140‑1 (MQ=255) cTTTCCGGGCCCGTTTGTCCATTCCCGCGGATGCCGGCCCGGCCGTCTCTCCGCCAGTCACAGCTGGCCTTCATGACGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCa < 2:458672/140‑1 (MQ=255) cTTTCCGGGCCCGTTTGTCCAGTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATGAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCa < 1:1396575/140‑1 (MQ=255) tCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCgg > 1:3201726/1‑122 (MQ=255) cGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTGCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCACTGTGTGGgtg < 2:1474885/140‑1 (MQ=255) tttGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGtgtg > 2:2878937/1‑140 (MQ=255) ggcccttCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCAt < 2:804458/135‑1 (MQ=255) gTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCAt < 1:1002345/140‑1 (MQ=255) gTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCAt < 1:755738/140‑1 (MQ=255) ccATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCa < 2:3510177/140‑1 (MQ=255) ccATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCa < 2:3349095/140‑1 (MQ=255) ccATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCa < 1:1439845/140‑1 (MQ=255) ccATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCa < 1:2208420/140‑1 (MQ=255) ccATGCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCa < 1:3425127/140‑1 (MQ=255) ccAGTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCa < 2:3744329/140‑1 (MQ=255) ccAGTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCa < 1:2434867/140‑1 (MQ=255) aTTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCACg < 1:2663618/140‑1 (MQ=255) ttCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTCACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCACgt < 1:1933732/140‑1 (MQ=255) ttCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCACgt < 1:1184021/140‑1 (MQ=255) ttCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCACgt < 2:1565879/140‑1 (MQ=255) ttCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCACgt < 1:868270/140‑1 (MQ=255) ttCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCACgt < 1:50109/140‑1 (MQ=255) ttCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCGGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCACgt < 1:2393664/140‑1 (MQ=255) | TGCCGATGCGCGGGCCGGTTGAAATGTCTTCCGGTGTATACCCGCTTTCGATGTAAAGCGGCTGTTCCGTGATCCAGCGTCCGTAGTCATTCATCGTGACGCCAAGCGCTTTCGTCAGCTTTCCGGGCCCGTTTGTCCATTCCCTCGGATGCCGGCCCGGCCTTCTCTCCTCCATTAACAGCTGGCCTTCATGAGGCTCAATCGCCCTGATTAATACCGCTTGCGGGACACCTGCTTCTGCGGCAACGACATTCAGCAATGTGTGGGTGTGCATCACGT > NZ_CP034943/3791783‑3792061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |