New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607817 =	500 (1.630)	7 (0.020)	7/266	10.3	1.4%	coding (660/1125 nt)	EO946_RS03185	collagen‑like protein
	?	NZ_CP034943	= 607825	496 (1.630)					coding (668/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTGAATCAAAAATGACATCAGCCTCTATAGCTACCGTTTGAGCGCTTAAGTTATATATATACCCGTATTCGGATAACCCAGCTGCTCCTGTGCCTGTGGCTCCCGTGGCTCCTGTCGCTCCGGTTGGTCCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/607950‑607817 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGGTCCGGCTTCCCCGGTAG  <  NZ_CP034943/607825‑607807                                                                                                                                                           TTGAATCAAAAATGACATCAGCCTCTATAGCTACCGTTTGAGCGCTTAAGTTATATATATACCCGTATTCGGATAACCCAGCTGCTCCTGTGCCTGTGGCTCCCGTGGCTCCGGTCGCTCCGGGTGGTCCGGCTGcgccg               >  1:3704427/1‑135                                                             ACCCGTATTCGGATAACCCAGCTGCTCCTGTGCCTGTGGCTCCCGTGGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGG     <  1:1946276/90‑1                                                             ACCCGTATTCGGATAACCCAGCTGCTCCTGTGCCTGTGGCTCCCGTGGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGG     >  2:1946276/1‑90                                                                            ACCCAGCTGCTCCTGTGCCTGTGGCTCCCGTGGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCG      >  1:3888365/1‑74                                                                            ACCCAGCTGCTCCTGTGCCTGTGGCTCCCGTGGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCG      <  2:3888365/74‑1                                                                                                         GTGGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAG  <  1:2181034/49‑1                                                                                                         GTGGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAG  >  2:2181034/1‑49                                                                                                                                                           TTGAATCAAAAATGACATCAGCCTCTATAGCTACCGTTTGAGCGCTTAAGTTATATATATACCCGTATTCGGATAACCCAGCTGCTCCTGTGCCTGTGGCTCCCGTGGCTCCTGTCGCTCCGGTTGGTCCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/607950‑607817 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGGTCCGGCTTCCCCGGTAG  <  NZ_CP034943/607825‑607807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.