| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 607210 | 516 (1.680) | 16 (0.050) | 12/256 | 8.0 | 3.1% | coding (53/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | 607823 = | 492 (1.680) | coding (666/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607066‑607210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccggACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAAC > NZ_CP034943/607823‑607960 gagcACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACACGGACCACCAGGACCACAAGGACCACCAGGACCACAAGGACTGCCGGGAGTCAAGGGAGCCCCAGGAGCTACCGGGGAAGCCGGACCA < 2:285416/136‑1GATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCA > 2:2503375/1‑140 TTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGC > 1:4480841/1‑140 TTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGC > 2:1365299/1‑140 TACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCC > 2:1351288/1‑140 TACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCC < 2:381931/140‑1 TACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAACGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGACGCCGGACCAGCC > 1:4144320/1‑140 ACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACCAGGACTGCGGGGAGTCATGGGAGCCACAGGACCGACCGGAGCCGGCGGACCAGact > 2:4650882/1‑137 ACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCG > 1:1765052/1‑140 ACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCG > 1:3259104/1‑140 ACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCG > 1:3135183/1‑140 CGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG > 1:4519721/1‑140 GCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCc > 2:688847/1‑139 ACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCG‑‑‑‑‑‑‑‑GG‑GCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT < 2:196023/140‑1 AAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGA‑‑‑‑‑‑‑‑‑AGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATA > 2:2330126/1‑130 AAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGA‑‑‑‑‑‑‑‑‑AGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATA > 2:2330123/1‑130 AAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGA‑‑‑‑‑‑‑‑‑AGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATA < 1:2330126/130‑1 AAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGA‑‑‑‑‑‑‑‑‑AGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATA < 1:2330123/130‑1 CCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCG‑‑‑‑‑‑‑‑GG‑GCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT < 2:781438/130‑1 CCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCG‑‑‑‑‑‑‑‑GG‑GCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT > 1:781438/1‑130 ACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCG‑‑‑‑‑‑‑‑GG‑GCGACAGGAGCCACGGGAGCTCCTGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACT > 2:1084820/1‑140 CTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCCAC > 1:2181034/1‑49 CTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCCAC < 2:2181034/49‑1 CCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT > 1:1946276/1‑90 CCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT < 2:1946276/90‑1 CGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGT < 1:3888365/74‑1 CGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGT > 2:3888365/1‑74 cggcgCAGCCGGACCACCCGGAGCGACCGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAA < 1:3704427/135‑1 GCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGAT > 1:4382136/1‑140 CCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATA < 2:4457732/140‑1 CGGACCAACCGGAGCGACAGGAGCGACGGGAGCCACAGGCACAGGAGAAGCTGGGTTATCCGAATCCGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAA > 2:687750/1‑140 CGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAA > 2:1693933/1‑140 GGACCACCCGGAGCGACAGGAGCGACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGTTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGTCTGATGTCATTTTTGATTCAACAGGGATAAC < 1:3748643/140‑1 GGACCAACCGGAGCGACAGGAGCGACAGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAAC < 2:2304025/140‑1 GGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGGAGCTGTGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAAC < 1:2784185/140‑1 GGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAAC < 1:378320/140‑1 GGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAAC < 2:238011/140‑1 GGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAAC < 1:4693664/140‑1 GGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAAC < 2:4327898/140‑1 GGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAAC < 1:2780665/140‑1 GGACCAACCGGAGCGACAGGAGACACGGGGGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAAC < 1:331683/140‑1 GATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607066‑607210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccggACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAAC > NZ_CP034943/607823‑607960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |