Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0540CG33.1% 311.3 / 60.7 191E573Q (GAA→CAA) EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (38/85);  new base G (60/1);  total (104/87)
Fisher's exact test for biased strand distribution p-value = 5.34e-21
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 198 total aligned reads displayed.

GCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATC  >  NZ_CP034943/633918‑634192
                                                                                                                                        |                                                                                                                                          
 cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGttgtttt                                                                                                                                        >  1:3865914/1‑139 (MQ=255)
    ggatgcCTTGTACCTTTTCAAGGTCACGATAGATTTCCGGACCACATAGCAATTCAAAGTTATGACTAATGTTTTCGTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTctttcttt                                                                                                                                     <  1:3719586/140‑1 (MQ=255)
       tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTttttttttg                                                                                                                                  >  2:3248686/1‑139 (MQ=255)
       tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCttttta                                                                                                                                  >  2:729715/1‑139 (MQ=255)
          cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                               <  1:1216507/140‑1 (MQ=255)
              tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCtt                                                                                                                           >  2:962948/1‑140 (MQ=255)
              tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGCGGTCTTTGTTTTTCCAttgtg                                                                                                                           >  2:1329287/1‑137 (MQ=255)
                 cTTTTCATGGTCTTGATAGATTTCCTGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCTATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttttt                                                                                                                        <  2:2753297/140‑1 (MQ=255)
                 cTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttttt                                                                                                                        <  1:1782921/140‑1 (MQ=255)
                 cTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttttt                                                                                                                        <  2:3295495/140‑1 (MQ=255)
                 cTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttttt                                                                                                                        <  2:1797704/140‑1 (MQ=255)
                 cTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttttt                                                                                                                        <  1:4709899/140‑1 (MQ=255)
                  ttttCATGGTCTTGATAGATGTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttc                                                                                                                       <  1:1507861/140‑1 (MQ=255)
                  ttttCATGGTCTTGAGAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttc                                                                                                                       <  1:3116944/140‑1 (MQ=255)
                  atgtgaTGGTCTTCATAGATGGCCGGATCACCGAGCAAGTCATCGTTATGACTAAGGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCATCAATCAGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttc                                                                                                                       <  1:3904143/135‑1 (MQ=255)
                   tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTATTTCTTTTTGCATTCtttttgt                                                                                                                      >  2:3487509/1‑138 (MQ=255)
                   tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGGTTTTGCATTCTTTttct                                                                                                                      >  2:982672/1‑140 (MQ=255)
                   tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttct                                                                                                                      >  2:1926204/1‑140 (MQ=255)
                   tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTACATTGTTTttct                                                                                                                      >  2:527703/1‑140 (MQ=255)
                    ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGGTGTTTGTTTTTGCATTATTTttctt                                                                                                                     >  2:1779404/1‑140 (MQ=255)
                    ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTTTTTTTGCAATGTTTttgtt                                                                                                                     >  1:4269968/1‑140 (MQ=255)
                    ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTGGATTGTTTttgtt                                                                                                                     >  1:2437110/1‑140 (MQ=255)
                     tCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttcttc                                                                                                                    <  1:2550350/140‑1 (MQ=255)
                      cATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttcttct                                                                                                                   <  2:1563882/140‑1 (MQ=255)
                        tGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTCCATTCTTTttgttattg                                                                                                                 >  2:4709899/1‑139 (MQ=255)
                        tGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTACCTTATTTttcttatta                                                                                                                 >  1:1145835/1‑139 (MQ=255)
                           tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTATTTTTCCAATGTTTTTGTTATTGata                                                                                                              >  1:3093196/1‑140 (MQ=255)
                           tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTCCATTCTTTTTCTTCTTAata                                                                                                              >  1:1155100/1‑140 (MQ=255)
                             ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTGCTTTATTTTTACATTATTTTTATTATTCatatt                                                                                                            >  2:659080/1‑139 (MQ=255)
                             ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTGTTTTTCCCTTCTTTTTGGTCTTAatatt                                                                                                            >  2:145753/1‑139 (MQ=255)
                             ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg                                                                                                            <  2:904209/140‑1 (MQ=255)
                              tGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTATTTTTATTCTTAATATGa                                                                                                           >  2:1121330/1‑140 (MQ=255)
                              tGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTATTTCTTTTTCCATTCTTTTTCTTCTTCATATGa                                                                                                           >  2:466940/1‑140 (MQ=255)
                               gATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGaa                                                                                                          <  2:4227436/140‑1 (MQ=255)
                                    aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGTACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTGCTTTTTCCATTCTTTTTGTTCTTCATATGaagggtt                                                                                                     >  1:2177273/1‑135 (MQ=255)
                                    aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTGGTTTTGAAGTCTTTTTGTTTTTCATATGaaagagt                                                                                                     >  1:269704/1‑135 (MQ=255)
                                    aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGttt                                                                                                     <  1:962948/140‑1 (MQ=255)
                                    aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTCTTTATTTTTGCATTATTTTTATTCTTAATATGAAAGttt                                                                                                     >  2:3603290/1‑140 (MQ=255)
                                     tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTGTTTCCATTCTTTTTGTTATTCATATGAACGgttt                                                                                                    >  2:2635588/1‑140 (MQ=255)
                                     tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTGTTTCCATTCTTTTTCTTCTTCATATGAACGtttt                                                                                                    >  2:3705747/1‑140 (MQ=255)
                                         cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                <  2:2288760/140‑1 (MQ=255)
                                         cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                <  1:1862627/140‑1 (MQ=255)
                                          ggATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTc                                                                                               <  1:3026898/140‑1 (MQ=255)
                                             tCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAgg                                                                                            <  1:1953329/140‑1 (MQ=255)
                                             tCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTACAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAgg                                                                                            <  1:4131684/140‑1 (MQ=255)
                                              cacaTAGCAATTCATCGTTATGACTACTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGAGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGc                                                                                           <  1:461744/140‑1 (MQ=255)
                                              cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGc                                                                                           <  2:1211188/140‑1 (MQ=255)
                                                 aTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTGCATTCTTTTTCTTCTTAATATGAAAGTTTTGAGTCAGGCttt                                                                                        >  2:871473/1‑139 (MQ=255)
                                                   atcAATTCATCGTTATGAATAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCTTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAAc                                                                                      <  2:3973227/138‑1 (MQ=255)
                                                   aGCAATTCATCGTTATGACTCATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAAc                                                                                      <  2:1512663/140‑1 (MQ=255)
                                                   aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGCTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTGATTTTTACATTGGTTGTCTTATTCAAAATAAAGTTTTGTGTGAGGCTTaaa                                                                                      >  2:868833/1‑139 (MQ=255)
                                                        ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTCTTTTTCCCTTCTTTTTTTTCTTCATATGTACGTTTTGAGTAAGGCTTAAaagaag                                                                                 >  2:451440/1‑140 (MQ=255)
                                                        ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCAATCTTTTTCTTGTTCATATTAACGTTTTGAGTCAGGCTTTACCGAAg                                                                                 >  2:544418/1‑140 (MQ=255)
                                                        ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTCGATTGTTTTTGTTATTCATATGAAAGTTTTTAGTCAGGCTTAAACGAAg                                                                                 >  2:2962561/1‑140 (MQ=255)
                                                          cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGGTTAGTTTTGCAGTGTTTTTATTGTTAAAATTGACGTTTTTTGTAAGGGTTAAACCAAGCa                                                                               >  1:2195805/1‑140 (MQ=255)
                                                           aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGGTTTATTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAg                                                                              >  2:4484282/1‑140 (MQ=255)
                                                           aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTCTTTTTGTTAGTCATATGAAAGTTTTTAGTCAGGCTTAAACGAAGCAg                                                                              >  2:3827347/1‑140 (MQ=255)
                                                           aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTGCATTGTTTTTTTTGTTAATATGAAAGTTTTTTGTCAGGCTTAACCGAAGCAg                                                                              >  2:4095085/1‑140 (MQ=255)
                                                           aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTATTTTTGCATTATTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAg                                                                              >  2:2034359/1‑140 (MQ=255)
                                                             cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGAGGGAGTCGTTGGGGTTGTTTCTTTTTTCATTTATTTTCGTGTTGATATTAAAGTTTTTTTTCATGCTTAAACGAATCactc                                                                            >  1:722727/1‑137 (MQ=255)
                                                                 aTGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGttt                                                                        <  2:2487718/140‑1 (MQ=255)
                                                                  tGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCCTTGTTTTTCTTCTTCATATTATCTTTTTGAGTAAGGCTTAACCGAAGCAGGCGtttt                                                                       >  2:2257903/1‑140 (MQ=255)
                                                                   gACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGttttt                                                                      <  1:286429/140‑1 (MQ=255)
                                                                       aaTGATTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCgg                                                                  <  2:4429146/140‑1 (MQ=255)
                                                                         tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt                                                                <  2:597452/140‑1 (MQ=255)
                                                                             ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCATTGTTTTTGTTCTTCATATTTACGGTTTGATTGAGGCTTAAACGTAGCAGGCGTTTTTTGGGTTTGct                                                            >  2:3179933/1‑140 (MQ=255)
                                                                                ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTGTTTTTGCATTGGTTTTGTTGTTACTATGAAAGTTTTTATTAAGGCGTAAACCAAACAGGCGTTTTTTGTGATTGCTCtt                                                         >  1:765934/1‑140 (MQ=255)
                                                                                ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTGCATTATTTTTCTTCTTAATATGAAAGTTTTTATTCAGGCTTAACCGAAGCAGGCGGTTTTTCGGtttacgagt                                                         >  2:3362488/1‑134 (MQ=255)
                                                                                      ggTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGAt                                                   <  1:997193/140‑1 (MQ=255)
                                                                                        tttGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTGGTTGGGGGTGGTTTTGTTTGCCATGTTTTTGTTGTTGCTATGTACGGGTTGTGTGCGGCGTAACCGCACCAGGCGGTTTTTGGGGTTGCTGTTgggggttg                                                 >  1:1678257/1‑133 (MQ=255)
                                                                                          tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTCTTTCTTTTTCCATTATTTTTCTTGTTCATATGAACGTTTTTAGTAAGGGTTAAACGAAGCAGGCGTTTTTTCGGATTCCTATTTCTGAtactg                                               >  2:2826796/1‑136 (MQ=255)
                                                                                          tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTTTGTTCTTGATATGAAAGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTAGGATTACTGTTTCTGATTCAt                                               >  2:3081503/1‑140 (MQ=255)
                                                                                              cAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGGATTGTTTTTGTTGTTGATTTTAAAGTTTTGTGTTAGGCTTTAAACAATACGGCGGTTTTTTGGATTTCTCTTGGTGCTTGAttttt                                           >  1:3086623/1‑139 (MQ=255)
                                                                                               aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTATTCATATTAAGGTTTTGAGTCTGGCTTAACAGAATAAGGCGTTTTTTCGGATTCCTATTTCTTTTTTAttttat                                          <  1:1621006/140‑3 (MQ=255)
                                                                                               aGTGGATTAAATTTCTTCAATCCGACGGAGTCGTTTGCGTTATTTCTTTTTCCATTCTTTTTCTTCTTCATATTAACGTTTTGAGTCAGGCTTAAACGAATAAGGCGTTTTTTCGGATTCCTATTTCTTTTTTAttttat                                          <  1:3956815/140‑3 (MQ=255)
                                                                                                 tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGTGGTTGTTTATTTTTCCAATGTTTTTCTTATTAATATGAAAGTTTTTAGTCAGTCTAAAAACAAACAGTCTTTTTTTAGGTTTTCTGTTTCTGTTTGAGTTtgtca                                        >  2:4102302/1‑139 (MQ=255)
                                                                                                 tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCATTGTTTTTGTTGTTCATATGAACGTTTTGAGTGAGGGTTAACCGAAGCAGGCGTTTTTTGGGTTTGGTGTTTGTGATTAAttttgtgc                                        >  2:3582647/1‑136 (MQ=255)
                                                                                                 tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCATTCTTTTTGTTGTTCAAATGTACGGTTTTTGTGAGGGGTAACCCAAACAGGCGTTTTTTCGGTTTACTCGTGCGGATTAATTTTATcc                                        >  1:935865/1‑140 (MQ=255)
                                                                                                 tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTCTTTTTGCATTCTTTTTGTTCTTCATATGAACGTTTTTAGTCAGGCTTAAACGAAGCAGGGGTTTTTTAGGTTTACTCTTTCTGATTAATTTTCTcc                                        >  2:4283127/1‑140 (MQ=255)
                                                                                                      tCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTGTGTTTTTGGATTCTTTTTGTTCTTGATTTTAAAGTTTTTTTTGATGCTTAAACGAAGCAGGCGTTTTTTCGGATTCCTGTTTGTTATTGATTTTTTCCAAtta                                   >  2:3644449/1‑139 (MQ=255)
                                                                                                      tCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCGTTTTCCAGTCTTTTTGTTCTTCATATGAACGGTTTGTGGCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAGTCCTCTTGCTGATTCATTTTCTCCCAtta                                   >  2:2183096/1‑139 (MQ=255)
                                                                                                         aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                <  2:759787/140‑1 (MQ=255)
                                                                                                         aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                <  1:4078878/140‑1 (MQ=255)
                                                                                                            tcttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCACCAATTCAAgctg                             <  1:3400393/140‑1 (MQ=255)
                                                                                                              ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                           <  1:4568794/140‑1 (MQ=255)
                                                                                                              ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                           <  1:335218/140‑1 (MQ=255)
                                                                                                               tcAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCCTTCTTTTTGTTCGTCATATGAAAGTTTTTAGTCAGGGTTAACCGAAGCACGCGTTTTTTGGGATTCCTCTTGGTGGTTGATTTTGTCCAATTAAAgcctgtc                          >  2:1189434/1‑135 (MQ=255)
                                                                                                                   tCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGtt                      <  2:4061911/140‑1 (MQ=255)
                                                                                                                        cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                 <  2:1880311/140‑1 (MQ=255)
                                                                                                                        cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                 <  2:269704/140‑1 (MQ=255)
                                                                                                                          gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGCACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct               <  2:2147062/140‑1 (MQ=255)
                                                                                                                          gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct               <  1:4411899/140‑1 (MQ=255)
                                                                                                                          gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct               <  1:4533468/140‑1 (MQ=255)
                                                                                                                          gAGTAGTTGGCGTTGTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct               <  1:4099270/140‑1 (MQ=255)
                                                                                                                             tCGTTGGGGTTCTTTGTTTTTGCATTATTTTTGTTCTTCATATGAACGTTTTTAGTGAGGCTTAACCCAAGCCGGCGTTTTTTGGGCTTGCTCTTGGTGTTTGATTTTATACAAATCAAACTGGTCTGtttttttgtacg            >  2:2860938/1‑135 (MQ=255)
                                                                                                                             tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg            <  2:4307093/140‑1 (MQ=255)
                                                                                                                             tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg            <  2:1678257/140‑1 (MQ=255)
                                                                                                                             tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTAATATTAACGTTTTGTGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg            >  2:565652/1‑140 (MQ=255)
                                                                                                                                   gCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataat      <  1:3286139/140‑1 (MQ=255)
                                                                                                                                       tctttcttTTTCCATTCTTTTTATTCTTCATATTAACGTTTTTAGTCAGGCTTAAACGAAACAGGCGTTTTTTGGGATTCCTATTGGTGATTAATTTTATACAATTAAAAATTCTCTGTTTTTTTATACGTAtaaaaaaa  >  1:4307093/1‑138 (MQ=255)
                                                                                                                                        |                                                                                                                                          
GCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATC  >  NZ_CP034943/633918‑634192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑