Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,097,4940AC24.4% 460.6 / 29.7 242K79N (AAA→AAC) EO946_RS05675MarR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (99/84);  new base C (1/58);  total (100/142)
Fisher's exact test for biased strand distribution p-value = 2.73e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 244 total aligned reads displayed.

GACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGTTTGCACAAATATTAT  >  NZ_CP034943/1097357‑1097632
                                                                                                                                         |                                                                                                                                          
gACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGc                                                                                                                                          >  1:4338241/1‑140 (MQ=255)
  cGAATTGAAGAAGATCTATGTCGAGCACGGTAGTAAAACTCAATTATCGTTGACACAAATTAATGTTATTTCTTTTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATTAATACGCCAAAAGCGa                                                                                                                                        <  2:4461645/140‑1 (MQ=255)
          acaagCTGGATGTCGCGCACGGCAGTAAATCACAATTCTCGATGACACAATTTATTGTTCTTTCTTGTGTTGGGCAAAATCAACCAATCAATGTCACGTCTATGCCAGAAAAAATGAATACCACAAACGCGACTGTATcg                                                                                                                                <  2:1487315/138‑1 (MQ=255)
              gCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCa                                                                                                                            >  1:1822175/1‑140 (MQ=255)
              gCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGGCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCa                                                                                                                            >  2:2705976/1‑140 (MQ=255)
               ctctATGTCGAGCACGGGATTAAATCTCAATTATCTATTAAAGAAATTAATTTTCTTTCTTGTGTTGGGGAAAATGAACCAATAAATGTCACGTCTATGGCATAAAAAATGAATACGACAAAAGCGACTGTATCGCGCAt                                                                                                                           <  2:1407125/140‑1 (MQ=255)
               cTCGATGTCGAGCACGGGAGTAAATATAAATTAGCGATCACATAAATTCATTTTCTTTTTTGTGTTGGGCACAATGAACAAATCAATGTAAGGTATTTTGAATAAAAAATGAATACCACAAAAGCGACTGTATCGCGCAt                                                                                                                           <  1:3448725/140‑1 (MQ=255)
                  cttGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTGATTGTGTTGGGGACAATGAACAAATCATTGTCACGTCTATTCCAGAAAAAATGAATACCACAAAAGCGACTGTATCGCGCATCAg                                                                                                                        <  2:4706535/138‑1 (MQ=255)
                    tGTCGAGCACGGTAGTAAATCTCAATTATCGATTAAATAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCATAAAAAATTAATACGACAAACGCGACTGTATCGCGCATCAGca                                                                                                                      <  2:3295201/140‑1 (MQ=255)
                         aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCATAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa                                                                                                                 >  1:4574532/1‑140 (MQ=255)
                         aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACACAAGCGACTGTATCGCGCATCAGCACaaaa                                                                                                                 >  1:3183996/1‑140 (MQ=255)
                         aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa                                                                                                                 >  1:2858010/1‑140 (MQ=255)
                              gggAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCt                                                                                                            >  1:1910295/1‑140 (MQ=255)
                                gAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCg                                                                                                          >  2:799137/1‑140 (MQ=255)
                                   tAAAACTCAATTATCGATGACATAAATTCATGTTCTTTGTTGTGTTGGGCAAAATGAACAAATCAATGTCACGTCTTTGCCAGAAAAAATGAATACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGgcg                                                                                                       <  1:4018561/140‑1 (MQ=255)
                                      aTCTAATTTATCTATTAAATAAATTCATGTTCTTTCTTGTTTGGGGCACAATCACCCAATCAATGTCACGTATATTGCATAAAAAATTAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCgg                                                                                                    <  2:862483/140‑1 (MQ=255)
                                      aTCTAATTTATCGATGACAGAAATTTTTGTTTTTTTTTGTGTTGGGCAAAATCAACAAATCAAGGTCACGTCTATTCAATAAAAAATCAACACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCgg                                                                                                    <  1:4227596/140‑1 (MQ=255)
                                        ctcATTTATCTATGACATAAATTAATGTTCTTTCTTGTGTTGGGGACATTCAACCAATCAATGTCACGTCTATTGCAGAAAAAATTAATACGACAACAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt                                                                                                  <  2:3156833/140‑1 (MQ=255)
                                        ctcAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt                                                                                                  >  1:3513772/1‑140 (MQ=255)
                                        ctaaaTTATCGATGACAGAAATTCTTGTTGTTTCTTGTGTTGGGGAAAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt                                                                                                  <  2:2109228/137‑1 (MQ=255)
                                           atttacggATGACTCAAATTCAGGTTCTTTCTTTTGTTGGTCACAATCAACCAATAAATGTAACGTCTATGCAAGAAAAAATCAATCCGACAACCGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc                                                                                               <  1:4544902/133‑1 (MQ=255)
                                           atttATCTATGACATAAATTAATTTTCTTTGTTGTGTGGGGGAAAATCAACAAATAAAGGTCACGTCTTTTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc                                                                                               <  2:4068283/138‑1 (MQ=255)
                                           aaTTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc                                                                                               >  2:1783287/1‑140 (MQ=255)
                                           aaTTATCGATCACACAATTTATTGTTTTTTGTTGTGTTGGGCAAAATCAACAAAAAAATGACAGGTATATGGCACAAAAAACCAACCCCAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc                                                                                               <  1:414794/140‑1 (MQ=255)
                                           aaTTAACTATGCCACAAATCCATGTTATTTTTTGTGTGGGGGACCCTCACCCAATCATTGTCAGGTATATGGCTGAAAAAATTAATCCGACAACCGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc                                                                                               <  1:1152910/140‑1 (MQ=255)
                                            aTTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAAGCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTca                                                                                              >  1:3562249/1‑139 (MQ=255)
                                             ttATCTATGAAAGAAATTCATTTTCTTTGTTGTGTTGGGTACATTGAACCAAAAAATGTCAGGTCTTTGGCAGAAAAAATCAATACCACAACCGCGACTTTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt                                                                                             <  2:1990213/140‑1 (MQ=255)
                                             ttATCGTTGACATAATTTTTTGTTTTTTTTTGTGTTGGTGACTATCAACAAATAATTGTAACTTTTTTTGAATAAAATTTTAATCCGAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt                                                                                             <  1:1482227/140‑1 (MQ=255)
                                             ttATCGATGACATAATTTCTTGTTCTTTGTTTTGTTGGGGACAATTAACCAATAAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt                                                                                             <  2:3221623/140‑1 (MQ=255)
                                             ttATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATTAACCAATCAATGTCACGTCTATTGCATAAAAAATTAATACGAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt                                                                                             <  2:1200775/140‑1 (MQ=255)
                                             ttATCGATGACACAATTTCATGTTCTTTCTTGTGTTGGGCACATTGAACCAATCAATGTCACGTCTATGGCAGAAAAAATGAATCCGCCAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt                                                                                             <  2:4468826/140‑1 (MQ=255)
                                             ttATCGATCACATAAATTCTTGTTTTTTGTTGTGTTGGGCACAATCAACCAATCATTGTCACTTCTTTTGCATAAAAAATAAAAACCAAAACCGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt                                                                                             <  1:678860/140‑1 (MQ=255)
                                             ttATCGATCACACAAATTCTTGTTGTTTCTTGTGTTGGGGACAATGAACCAATCATTGTCACGTCTATTGCAGAAAAAATGAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt                                                                                             <  2:2552919/140‑1 (MQ=255)
                                             gtaacGATGCCAGAAACTCATGTTCTTGGTTGTGTGGGGGACAATGAACCAATCATGGTCCCGTCTATTGCACAAAAAATGAATACGACAAAAGCGACTGTAGCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt                                                                                             <  2:3530370/136‑1 (MQ=255)
                                                tCGATGAAATAATTTCTTGTTATTTTTTGTTTTGGGGAAAATGAACAAATCAATGTCACTTCTTTTGAACAAAAATTTATTACCAAAACAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca                                                                                          <  1:1022925/140‑1 (MQ=255)
                                                  gATTACAGATATTCATCTTCTTTCTTGGGTGGGGCACAATCACCCAATCATTGTCAGGTCTTTTCCACAAAAAATTAATCCCACAACAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTcaca                                                                                        <  1:3632125/140‑1 (MQ=255)
                                                  gATGACACAAATTCATGGTCTTTGTTGTGTGGGGGACAATGAACCAATCAATGCCACGTCTATTGCACAAAAAAGGAAAACCACACCCGCGCCTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTcaca                                                                                        <  1:44273/140‑1 (MQ=255)
                                                     gACAGAAATTAATGTTCTTTCTTTTGTTGGGGACAATGAACCAATAAATGTCACGTCTTTTGCACAAAAAATTAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGaa                                                                                     <  2:1124077/140‑1 (MQ=255)
                                                       cAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca                                                                                   <  2:3486789/140‑1 (MQ=255)
                                                       aataaaTTCATGTTCTTTCTTGTGTGGGGCACACTCAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca                                                                                   <  2:3067726/137‑1 (MQ=255)
                                                       aataaaTTAATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca                                                                                   <  2:3609997/137‑1 (MQ=255)
                                                                  tttctttctTGTGTTGGGCAAATTGAACAAATCAAGGTCACGTCTATTGCACAAAAATTCAATCCGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa                                                                        <  1:2241245/139‑1 (MQ=255)
                                                                  gTTCTTTTTTGTGTTGGGCACAAGTAACAAATAATTGTCACGTATATTGCATAAAAAATCAAAACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa                                                                        <  1:2894163/140‑1 (MQ=255)
                                                                             tgtgGGGGACATTGAACCAATCAATGTCACGTATTTTGAAGAAAAAATGAATACGACAACAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg                                                             <  2:4281075/140‑1 (MQ=255)
                                                                             tgtTGGTTACATTTAACCAATCAATCTCAGTTCTATTCCAGAAAAAATTAATAGCAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg                                                             <  2:1582570/140‑1 (MQ=255)
                                                                             tgtTGGGTAAAATGAACAAATAAATGTCACGTCTTTTGCATAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg                                                             <  2:4072034/140‑1 (MQ=255)
                                                                             tgtTGGGGACAATCAACCATTATCTGTCTCTTCTTTTGCACAAAAAATTAATCCGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg                                                             <  1:1957436/140‑1 (MQ=255)
                                                                             tgtTGGGGAAAATTAACCAATCAATGTCACGTATTTTGCATAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg                                                             <  2:1938531/140‑1 (MQ=255)
                                                                             tgtTGGGGAAAATTAAACAATCAATGTCACTTCTATTTCATAAAAAATGAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg                                                             <  1:3694814/140‑1 (MQ=255)
                                                                             tgtTGGGGAAAATGAACAAATAAATGTCACGTCTTTTGCAGAAAAAATGAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg                                                             <  1:3343707/140‑1 (MQ=255)
                                                                             tgtTGGGGAAAATCAACAAATAAAGTTCACGTCTTTTGAATAAAAAATGAATACCAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg                                                             <  1:1912009/140‑1 (MQ=255)
                                                                             tgtTGGGCACAATGAACCAATCAATGTCACGTATATTGACCAAAAAATGAATACTACAACAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAagg                                                             <  2:1870860/140‑1 (MQ=255)
                                                                               ttGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca                                                                                   >  1:2216936/1‑116 (MQ=255)
                                                                               ttGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAaggag                                                           >  1:458427/1‑140 (MQ=255)
                                                                               ttGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAaggag                                                           >  1:3875428/1‑140 (MQ=255)
                                                                                       aaTTAACAAATAAATTTAACTTTTATTGCAGAAAAAATTAATACGACAAACGCGACTGTATCGCGCATCAGCACAATATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACtt                                                   <  2:2528844/140‑1 (MQ=255)
                                                                                       aaTGAACCAATCCATGTCACGTCTATTGCAGACAAAATGAATACGACAAAAGCGACTGTATCGCGCGTCAGCTCAAAATTGCTCGGCGCGGGTTGCCTTCTCAGAACACAGCTCAGCGATAACAAACGGGAGGTCTAcgt                                                   >  1:542933/1‑138 (MQ=255)
                                                                                       aaTGAACCAAAAAATGTCACTTCTTTTCCATAAAAAATCAATACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACtt                                                   <  1:3936257/140‑1 (MQ=255)
                                                                                         tGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTcc                                                 >  2:589586/1‑140 (MQ=255)
                                                                                              caatcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAACAAGGAGGTCTACTTCCGATTg                                            >  1:4028780/1‑140 (MQ=255)
                                                                                                 tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGt                                                         >  1:2101345/1‑124 (MQ=255)
                                                                                                 tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACg                                         >  2:4361701/1‑140 (MQ=255)
                                                                                                 tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACg                                         >  1:2972521/1‑140 (MQ=255)
                                                                                                 tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACg                                         >  2:3935980/1‑140 (MQ=255)
                                                                                                 tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACg                                         >  1:1262926/1‑140 (MQ=255)
                                                                                                 tcaatGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACAAAGCTCAGCGATAACAAAAAGGAGGTCTCCTTCCGATAGACg                                         >  1:2436837/1‑140 (MQ=255)
                                                                                                     tGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACgccgg                                     >  2:2735574/1‑140 (MQ=255)
                                                                                                      ttaaCGTTTTTTGAATAAAAATTGAATACCAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACgccggc                                    <  1:1793422/137‑1 (MQ=255)
                                                                                                      gtcagttCTTTTGCACAAAAAATTAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACgccggc                                    <  1:647302/134‑1 (MQ=255)
                                                                                                      gTCACTTCTATTGCATAAAAAATGAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACgccggc                                    <  1:4008162/140‑1 (MQ=255)
                                                                                                         aCGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGccggccgg                                 >  1:1368281/1‑140 (MQ=255)
                                                                                                          cGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTTACGCCGGCCggg                                >  1:2930687/1‑140 (MQ=255)
                                                                                                          cGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCggg                                >  2:1852405/1‑140 (MQ=255)
                                                                                                          cGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCggg                                >  1:2634368/1‑140 (MQ=255)
                                                                                                           gTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGa                               >  1:2646354/1‑140 (MQ=255)
                                                                                                             atATTGCATAAAAAATCAATACCACAACCGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGaaa                             <  1:4684510/139‑1 (MQ=255)
                                                                                                              tATTGCAGAAAAAATGAATACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGaaaa                            <  2:3898666/140‑1 (MQ=255)
                                                                                                               tttccAGAAAAAATCAATACTACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGaaaaa                           <  1:1525348/136‑1 (MQ=255)
                                                                                                               agtGCACAAAAAATGAAGACCACAACCGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGaaaaa                           <  1:3746271/138‑1 (MQ=255)
                                                                                                               aTTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGaaaaa                           >  2:444855/1‑140 (MQ=255)
                                                                                                               aTTGAATAAAAAATGAATACGACAACAGCTACGGTATATCGCATCAGCACAAAATTCATCCGCGCGGGTTTCCTTCACAGACCACAGCTCAGAGATAACAAAAAGGAGGGCTACTTCCGATTGACGCCGGCCGGGaacaa                           >  1:523692/1‑140 (MQ=255)
                                                                                                                 tGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAAc                         >  1:1982150/1‑140 (MQ=255)
                                                                                                                    acaaaaaaTCAATCCCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGc                      <  2:2240683/138‑1 (MQ=255)
                                                                                                                    acaaaaaaTCAATACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGc                      <  1:3783915/138‑1 (MQ=255)
                                                                                                                    aGAAAAAATGAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGc                      <  2:4697787/140‑1 (MQ=255)
                                                                                                                    aGAAAAAATCAATACCACAACAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGc                      <  1:2411011/140‑1 (MQ=255)
                                                                                                                     gAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGca                     >  1:3328403/1‑140 (MQ=255)
                                                                                                                      aaaaaaTGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGcac                    >  1:2795035/1‑140 (MQ=255)
                                                                                                                      aaaaaaTGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGcac                    >  1:4491166/1‑140 (MQ=255)
                                                                                                                      aaaaaaTGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGcac                    >  1:805761/1‑140 (MQ=255)
                                                                                                                      aaaaaaTGAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGcac                    <  2:542161/140‑1 (MQ=255)
                                                                                                                         aaaTTAATCCGAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGt                 <  1:939136/140‑1 (MQ=255)
                                                                                                                         aaaTTAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGt                 <  2:2660677/140‑1 (MQ=255)
                                                                                                                         aaaTTAAGACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGt                 <  1:1244486/140‑1 (MQ=255)
                                                                                                                         aaaTGAATACCAAAACAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGt                 <  1:1769736/140‑1 (MQ=255)
                                                                                                                              aaTACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGTTTGca            <  1:830174/140‑1 (MQ=255)
                                                                                                                              aaTACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGTTTGca            <  1:3233490/140‑1 (MQ=255)
                                                                                                                                 aCGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGTTTGCACaa         <  1:1685689/140‑1 (MQ=255)
                                                                                                                                 aCGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGTTTGCACaa         <  1:4465663/140‑1 (MQ=255)
                                                                                                                                     cAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGTTTGCACAAatat     >  1:1172260/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                          
GACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAAAAAGGAGGTCTACTTCCGATTGACGCCGGCCGGGAAAAAACTGCACAGTTTGCACAAATATTAT  >  NZ_CP034943/1097357‑1097632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑