Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP034943 | 1,366,115 | 0 | G | C | 25.1% | 393.7 / 27.8 | 198 | E205Q (GAA→CAA) | EO946_RS07135 | PepSY domain‑containing protein |
Reads supporting (aligned to +/- strand): ref base G (84/59); new base C (0/48); total (85/113) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.92e-15 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 204 total aligned reads displayed.
CAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATT‑GCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATACAAAACA > NZ_CP034943/1365977‑1366253 | caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATT‑GCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga > 1:148531/1‑140 (MQ=255) caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATT‑GCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga > 1:3809610/1‑140 (MQ=255) aaaaaaaCACCTATTACTAAAAAACAACCAAAAACCATT‑GCTGAGCGAGAAACGGGGGGGACAGCGTATGACGCATATCTCTAAAAAAGTGTGGCAACTCTAATCTTTGAAGTGGTTTTTTATCTTCCGTATGATAaaga < 2:354394/139‑1 (MQ=255) accacCGATTACCACAAAATAACCCAAAACCTTC‑CCTGAGCGATAAACGGCGGGCACTGCGGATGACGCCGATCTCGAAAAAAGTGAGGGAACACTCATTTTTTAATTGTTTTTTGTATTTCCGTATGATAAACACGCGa < 2:2242625/138‑1 (MQ=255) cGATTACGAAAAAAGAAGCCAAAACCATT‑GCTGAGCGAGAAACGGGCGGTACAGCGGATGACGCAGATCTCGAAAAAAGTGAGTGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtgtg > 2:1167041/1‑140 (MQ=255) gATTACGAAAAAAGAAGCCAAAACCATT‑GCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGa > 2:2480632/1‑140 (MQ=255) caaaaaaGAAGAAAAAACCTGT‑CCTGTGCGAGAACGGGGGGGGACCGCGTATGACGCTGTTATCTAAAAATGTGCGGTCACTCTAATTTTTGATGTGTATGTTGTTCTTCCGTTTCTTAAAGAAGCGACTGTGAAAATTa < 2:2031170/139‑1 (MQ=255) agaccccAAAACCCTG‑GCTGAGTCACAAAGTGGCGGAACAGCGGTTGACGCATATCTCTAAAAAAGTCAGGGAAATTTAATGTTTGAATTGTTTTTTGATCTTCGGTATGATAAACACGCGACTGTGAAAATTAATGCCt < 2:3955264/135‑1 (MQ=255) taagCCAAAACCTTT‑GCTGAGGCAGAAACGGGCGGGACAGGGTATGACGCAGATCTCCAAAAAAGTTAGGGCAGTCTAATCTTTTAAGTGGTTGTTTATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTa < 2:3809610/139‑1 (MQ=255) aaccaaaaaCCATG‑GCTGAGCGACAAACGGGCGGGACAGCGTTTGACCCATATCTCTAAAAAAGTGAGGGCAATCTAATTTTTTAATTGTTTTTTTATCTTCGGTTTGATAAATAAGCGACTGTGAAAATTAATGCCTac < 1:3761337/135‑1 (MQ=255) aCCATTGGCTGCGCGAGAAACGGGGGGGACCGCGGATGACGCAGATCTCCAAAAAAGGGCGGGCACTCTAATCTTTGAAGTGGTGTTTGATGTTCCGTATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGaa < 1:4307596/140‑1 (MQ=255) ccttt‑GCTGCGCGATAACGGGGCGGGACCGGGGATGACGCAGATCTCTAAAAACGTGCGGGCACTATAATGTTTGATTTGGTTGTTTATCTTCGGGTTTATAACGACGCGACTGTGAAAATTAATGCCTACACCGGAAAg < 1:2313270/137‑1 (MQ=255) tt‑GCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGtt > 2:2212580/1‑140 (MQ=255) tt‑GCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGtt > 2:2422731/1‑140 (MQ=255) cTGCGCTAGAACCGGGCGGCACTGCGTTTCACAAATATATCCAAAATAGTGTGGGCACTAAAATTTTTTAAGTGTATTTTTATCTTCCGGTTTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:4191631/140‑1 (MQ=255) cTGAGCGAGAACGGGGGGGCACCGGGGATCACGAAGATCTCTAAAAATGTGAGGCCACTCTATTATTTGATGTGTATGTTGATGTTCCGGATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:170502/140‑1 (MQ=255) cTGAGCCACAACCGGGCGGGACAGCGGATGACCAAGATATCCAAAAAAGTGAGGCCACTCTCATATTTGAAGTGGTTGTTGATCTTCCGGATTATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:3379202/140‑1 (MQ=255) gcgCGACAACCGGGCGGCACAGGGGATGACGAAGATGTCGAAAAATGTGCGGGCACTCTCATCTTTGACGTGGATGTTGATCTACCGGATGATAACGAAGCGACTGTGAAAATTCATGCCTACACCGGAAAGGTTGCaaa < 2:4377373/138‑1 (MQ=255) gAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCaaa > 1:1764211/1‑140 (MQ=255) gCGAGAACCGGGCGGGACCGCGGATGCCGCAGAACTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATTATACACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:854077/140‑1 (MQ=255) gCGACAACCGGGCGGCACAGGGTATGACGCAGAACCCCAAAAAAGGGAGGGCACTCTAATTTTTGATGTGTTTGTTTATCTTCCGGATTATAACCAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:2796369/140‑1 (MQ=255) cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt > 2:469700/1‑140 (MQ=255) ccaaccgggcgggACCGCGGATCACGAAGATCTCAAAAAAAGTGCGGCAACGCTAATTTTTTAAGTGTTTTTTGTTCTGCCGTATCATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 1:1680735/135‑1 (MQ=255) agaACCGGGCGGGACAGCGGATCACGCAGATATCTAAAAAAGTGAGGGCACTATCATGTTTGAAGTGTTTGTTGATCTTCCGTATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 2:310128/140‑1 (MQ=255) acaaccgggcgggACCGGGGTTCACGAAGAACTCAAAAAATGTGAGGGCAATCTAATTTTTTATGTGTTTTTTGATCTGCGGTATAATAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 1:1624416/135‑1 (MQ=255) acaaaCGGGCGGGACCGCGGATGACGCATATCTCGAAAAAAGTGAGGCCACTCTAATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 2:1961659/138‑1 (MQ=255) acaaaCGCGCGGCACAGCGGATGACGCAGATCCCCAACAAAGTGAGGCCACTCTAATCTTTCATGTGGATGTAGATCTTCCGCATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 2:3789078/138‑1 (MQ=255) ggggcggcCCCGCGTATGACGAAGATCACCAAAAAAGTGCGGCCACTCTCATCTTTTATGTGTTTGTTTCTCTTCGGGATGATAACCAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt < 1:3921261/139‑1 (MQ=255) cgggcggtACAGCGGATGACCCAGATCTCGAAAAAAGTTAGGGAACTCTAATCTTTGAAGTGCTTGTTTATCTCCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt < 2:192784/140‑1 (MQ=255) cgggcgggACAGCGTATGACGCATATCTCCAAAAAAGTGAGGCCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt < 2:1534725/140‑1 (MQ=255) gggcgggACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTCGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATg > 1:1142916/1‑140 (MQ=255) gcgggACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAg > 1:1122073/1‑140 (MQ=255) gtcaCAGCGTATCACGAATTTCACAAAAAATGTGAGGCCACTCTCTTTTTTTATGTGTTTTTTGTTTTTCCGGATTATAATCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa < 1:2422816/137‑1 (MQ=255) gggACAGCTTATGACGAAGATCTCGAACAAAGTGAGGGCACTCTAATCTTTGAAGGGGATGTTGATCTTCCGGATTATAACCAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa < 2:1782384/140‑1 (MQ=255) gggACAGCGGATGACGCAGATATCTAAAAATGTGAGGGCACTCTCATATTTGAAGTGGATGTTGATCTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa < 2:26783/140‑1 (MQ=255) ggcaCAGCGGATGACGCAGATCTCTAAAAAAGTGCGGGAAATATCATCTTTGACGTGTATGTTGATCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa < 1:3520963/137‑1 (MQ=255) ggACAGCGGATGACGCAGATCTCGAAAAATGTGAGGGCACTCACATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGAc < 2:4579079/140‑1 (MQ=255) gACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACt > 2:3654949/1‑140 (MQ=255) gCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACg > 1:1536987/1‑140 (MQ=255) tGACGCACAACTCCAAAAAACTGAGGCCACTCACATCTTTGAATTGGATGTTTATCTACCGGATCAAAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtc < 1:1013533/140‑1 (MQ=255) gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct > 1:2101572/1‑140 (MQ=255) gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct > 1:4452661/1‑140 (MQ=255) aaGATCTCCAAAAATGTGTGGCCACTCTCTTATTTGATGTGTTTTTTGATCTCCGGGTTCATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatc < 1:3068068/139‑1 (MQ=255) aGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatca > 2:4121078/1‑140 (MQ=255) aGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatca > 2:2575207/1‑140 (MQ=255) aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa > 1:3155574/1‑140 (MQ=255) aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGGTCTCATCaaa > 1:3272039/1‑140 (MQ=255) tctcGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCTGAAAGGTTGCAAACATTGTGTATGAGTACTGACGGGTTCTCATCAAAt > 2:630971/1‑140 (MQ=255) gAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtctc > 1:842776/1‑140 (MQ=255) gAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtctc > 2:4645814/1‑140 (MQ=255) gAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtctc > 2:2273922/1‑140 (MQ=255) gAAAAAAGTGAGGGCACTCTCATCTTTGAAGTCGATGTTGATCTTCAGGATGATAAAGAAGCGACTGTGAAAATTAAAGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtctc > 2:1057953/1‑140 (MQ=255) aaGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCtt > 2:3295654/1‑140 (MQ=255) aaGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCtt > 2:1663072/1‑140 (MQ=255) aaGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCtt > 2:1795934/1‑140 (MQ=255) gAGGGCACTCACTTATTTGAAGTGTATGTTTATCTTCCGGATAATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTtctc < 2:2784020/140‑1 (MQ=255) aGGGCACTATCATCTTTTAAGTGGATGTTTATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTtctct < 2:148296/140‑1 (MQ=255) tctcATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTc > 2:4099048/1‑140 (MQ=255) tctcATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTc > 1:1228347/1‑140 (MQ=255) tctcAAGTTTGACGTGGTTGTTGATCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTc < 2:1015829/140‑1 (MQ=255) tctaATTTTTTAAGTGGATTTTGATCTTCCGCATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTc < 2:1740768/140‑1 (MQ=255) tctaATATTTGACTTGGATGTTGTTCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTc < 2:4588443/140‑1 (MQ=255) taatttttGAAGTGTATGTTGTTTTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGGTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt < 1:4647932/135‑1 (MQ=255) taaTCTTTCACGTGGTTGTTGATGTTCGGGTTGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt < 1:1731050/138‑1 (MQ=255) tGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGt > 1:2949223/1‑140 (MQ=255) tGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGt > 2:2061242/1‑140 (MQ=255) tGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGt > 2:1369184/1‑140 (MQ=255) tGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTGTCTCTCGTTTTCCTTTCATGt > 2:1253257/1‑140 (MQ=255) gAAGTGGATGTTGATCTTCCGGATGATAAATAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGtt > 1:2677144/1‑140 (MQ=255) gAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGtt > 2:3442698/1‑140 (MQ=255) gAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGtt > 1:3430251/1‑140 (MQ=255) gAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGtt > 1:3643763/1‑140 (MQ=255) aggtgtATTTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg < 1:3356350/138‑1 (MQ=255) acgtgtttGTTGATGTTCCGTTTGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg < 1:1412614/133‑1 (MQ=255) atttgATGTTTATCTTCCGGATTATAACCCAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa < 1:3235148/136‑1 (MQ=255) gTGGATTTTTATCTTCGGTATTATAACCCAGCGACTGTGAAAATTAATGCCGACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAg < 1:2565783/140‑1 (MQ=255) ctgtcttttGATCTTCCGGATCAAAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAg < 2:3524754/133‑1 (MQ=255) gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt > 2:3648904/1‑140 (MQ=255) gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt > 2:1274423/1‑140 (MQ=255) gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt > 1:4406785/1‑140 (MQ=255) gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt > 2:3337204/1‑140 (MQ=255) gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt > 2:2863230/1‑140 (MQ=255) gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGGTGCAAACAATGTGTATGAGGACTGAGGGGTTCTCAGAAAATTCTCTTCTTTCTCTCTTTTTGCTTTCAAGTTGAgtgt > 1:2880927/1‑140 (MQ=255) ttGTTGATCTTCCGTATTATAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgtg < 1:654554/139‑1 (MQ=255) ttaTCTTCGGGATTAAAAACCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTaaa < 1:2383339/138‑1 (MQ=255) gATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAAc < 2:3430251/140‑1 (MQ=255) aTCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt < 1:3593926/119‑1 (MQ=255) aTCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt > 2:3593926/1‑119 (MQ=255) aTCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt < 1:4681746/119‑1 (MQ=255) ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGaa > 1:1459528/1‑140 (MQ=255) tCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAAc < 1:1946070/140‑1 (MQ=255) tCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAAc > 2:817769/1‑140 (MQ=255) ccGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACt > 2:3495886/1‑140 (MQ=255) ccGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACt > 2:702088/1‑140 (MQ=255) ggATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGtt < 1:4582762/107‑1 (MQ=255) atgatAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATa < 1:3952488/140‑1 (MQ=255) atgatAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATa < 1:3442698/140‑1 (MQ=255) agtatAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATa < 1:2078992/137‑1 (MQ=255) atAATGAAGCGACTGTGAAAAATCATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCATATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATacaa < 2:1590663/140‑1 (MQ=255) atAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATacaa < 2:145474/140‑1 (MQ=255) | CAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATT‑GCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATACAAAACA > NZ_CP034943/1365977‑1366253 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |