New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 607695 =158 (0.900)22 (0.130)
+AGTAGCCCCT
16/248 4.4 10.7% coding (538/1125 nt) EO946_RS03185 collagen‑like protein
?NZ_CP034943 = 607846 241 (1.370)coding (689/1125 nt) EO946_RS03185 collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/607833‑607695
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGC  <  NZ_CP034943/607846‑607710
                                                                                                                                           ||||||||||                                                                                                                                         
CTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCA                                                                                                                                                    <  2:2563435/140‑1
CTCCGGTTGGTCCGGCTTCCCCGGGAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCA                                                                                                                                                    <  1:19241/140‑1
  CCGGTTGGTGCGTGTGCCCCTGTAGCTGCTGTGGCTCCGGCTGGTGCGACGTCCCCAGTCGCGCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGT                                                                                                                                                  <  2:967120/140‑1
  CCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGT                                                                                                                                                  <  2:2257613/140‑1
  CCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGT                                                                                                                                                  <  1:710408/140‑1
    GGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAG                                                                                                                                                <  1:112575/140‑1
    GGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAG                                                                                                                                                <  1:2149767/140‑1
    GGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAG                                                                                                                                                <  1:112568/140‑1
     GTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGC                                                                                                                                               <  2:871809/140‑1
           CCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTCCCCCGGTAGCTCCTGTCGCTCCGGGTGGTCCGCCGTCCCCAGTAGCCCCTGT                                                                                                                                         >  1:2140690/1‑140
               CTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCGGTGGCg                                                                                                                                     >  1:1653696/1‑139
                 TCCCCGGTAGCTCCTGGGGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGGAGCCCCTGTGGCTCC                                                                                                                                   <  2:1345381/140‑1
                                    CTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTA                                                                                                                                                 <  2:2142001/107‑1
                                    CTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTA                                                                                                                                                 >  1:2142001/1‑107
                                    CTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTA                                                                                                                                                 <  2:2179039/107‑1
                                    CTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTA                                                                                                                                                 >  1:2179039/1‑107
                                         GCTGGTCCGACGTCCCCAGTAGCGCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTC                                                                                                           <  2:1445871/140‑1
                                         GCTGCTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTC                                                                                                           <  2:2087023/140‑1
                                                                 CCTGTGGCTCCCGTCGCTCCGGGTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGGTGGTCCGGATTCGCCAGTAGCACCTGTGGCTCCCGTAGCTCCGGTTGGTCCGGCTGCGCCGGGAGCTCCTGTAGCTCCGGC                                                                                   >  1:1633064/1‑140
                                                                   TGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGTAGCCCCTGTGTCTCCCGTAGCTCCGGTTGGTCGGGCTTCGCCCGTAGCTCCTGGCGCGCGGGCTG                                                                                 >  1:28741/1‑140
                                                                         TCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGTAGCCCCT                                                                                                                                           >  1:910529/1‑76
                                                                                          GTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAG                                                                                                                                                   <  1:2475022/51‑1
                                                                                          GTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAG                                                                                                                                                   <  1:1833587/51‑1
                                                                                          GTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAG                                                                                                                                                   >  2:2475022/1‑51
                                                                                          GTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCGTCCCCAG                                                                                                                                                   >  2:1833587/1‑51
                                                                                                                  TCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGT                                  <  2:1275446/140‑1
                                                                                                                   CGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTC                                 <  1:2143885/140‑1
                                                                                                                     CTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCG                               <  2:1662630/140‑1
                                                                                                                          GCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTC                          <  1:1802169/140‑1
                                                                                                                           CTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCC                         <  1:750241/140‑1
                                                                                                                           CTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCC                         <  1:165845/140‑1
                                                                                                                               TCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTACGGGTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGGTGGTCCGGCTTCCCCGG                     >  1:451667/1‑140
                                                                                                                                   aCTTCCCCAGTAGCACCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGC                 <  2:1075144/139‑1
                                                                                                                                    cgTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCT                >  2:2544775/3‑140
                                                                                                                                       tCCCAGTAGCCCCTGTGGGTCCAGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCT             <  1:246109/139‑1
                                                                                                                                        CCCCGTAGCCCCGGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTG            <  2:967296/140‑1
                                                                                                                                        CCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTG            <  1:1608484/140‑1
                                                                                                                                        CCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTG            <  2:526950/140‑1
                                                                                                                                        CCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTG            <  1:1780968/140‑1
                                                                                                                                          CAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTC          >  1:1378616/1‑140
                                                                                                                                                CCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCG    >  1:337085/1‑140
                                                                                                                                                CCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGGTGGTCCGGCTTCCCCGGTAGCTCCTGTGGCTCCc    >  1:957057/1‑139
                                                                                                                                                CCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCGGGGGCTCCCGTCGCTCCGGGTGGTCCGGCGTCCCCGGGAGCTCCTGTCGCTCCG    >  1:299785/1‑140
                                                                                                                                                CCCCTGTGGCTCCCGTCGCTCCGGTGGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGGAGGGCCTGTGGCTCCCGAGGCTCCGGGGGGTCCGGGTTCGCCGGGTGCTCCTGTCGCTCCG    >  1:2407863/1‑140
                                                                                                                                                 cgCTGGGGCTCCGGTCGCTCCGGTTGGTCCGGCGTCCGCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTGCCCCGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGG   <  2:2022828/138‑1
                                                                                                                                                  CCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGC                 >  2:2062828/1‑125
                                                                                                                                                  CCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGC                 <  1:2062828/125‑1
                                                                                                                                                  CCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGGTGGTCCGGCTTCCCCGGTAGCGCCTGTCGCTCCGGC  >  2:218033/1‑140
                                                                                                                                           ||||||||||                                                                                                                                         
CTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/607833‑607695
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGC  <  NZ_CP034943/607846‑607710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.