Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP034943 | 549,144 | 0 | A | C | 22.8% | 253.3 / 11.0 | 136 | Q52H (CAA→CAC) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
Reads supporting (aligned to +/- strand): ref base A (53/52); new base C (0/31); total (53/83) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.18e-08 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 140 total aligned reads displayed.
TTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCAA > NZ_CP034943/549006‑549279 | ttttAATAGAATTGTGGATATTCCGATTTATCAGCAGTTTTATCGCTTTTTCAAACAAAACATGCATCTGGGGCTTTTTAAAAATGTAATGAAGCTCCCTTCCAAAAGACTCCGGGCGATTAAGCTTTCCATCAGTCaaa < 2:2487936/140‑1 (MQ=255) tttGAATATAAATGTGTATATTCCGCTTTATCAGCAGCTTTATCTATATTTAAAAGAAAACATGCATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAAACACTCGTGGCTAGTCAGCTTTCCATCAGTCaaa < 2:777777/140‑1 (MQ=255) tttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGATTTATCGATTTTTAAAATAAAACATGCATCAGGGGCGTTTTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCGTGGCTTGTCTGCTTTCAATCAGTCaaa < 2:365961/140‑1 (MQ=255) ttgtttatTCGGCTTTATCAGCAGTTTTATCGATATTTCAAAGAAAACAGCCATCCGGGGCGTATTCAAACAGCATTGACGCTCCCTTCCAAAAGACTCCTGGGTTGTAAGCTTTCCATCTGACCAACGACTGTAGAACg < 2:338287/135‑1 (MQ=255) cTGTATATTCCTCTTTATCAGCAGCTTTATCGATTTTTAAAACAAAACATCCAGCCGGGGCTTATAAAAAAAGCAATGAAGCTCCCTTCCACAACACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACg < 1:958918/140‑1 (MQ=255) cTGTATATTCCTATTTATCAGCAGATTTATCGATATTTAAAATAAAACATGCATCAGGGGCGTATACAAAAAGGAATGAAGCTCCCTTCAAAAACACTCCTGGCGAGTCAGCTTTCAATCAGTAAAACGACTGTAGAACg < 2:1804620/140‑1 (MQ=255) cTGTATATTCCGCTTTATCAGAAGCTTTATCGATATTTCAAATAAAACATGAATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTAAGCTTTCCATCAGTCAAACGACTGTAGAACg < 2:604972/140‑1 (MQ=255) cTGTATATTCCGCTTTATCACCAGATTTATCTCTATTAAAAATAAAACATGCATCAGGGGCTTATTAAAAAAGGAATGAAGCTCCTTTCCAAAACACTCCTGCCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACg < 1:1639445/140‑1 (MQ=255) cTGTATAGTCCGCTTTATCAGAAGCTTTATCGCTATTTCAAAGAAAACATGCACCCGGGGCTTATTAAAAACGGAATGAAGCCCCCTACCAAAAGACTCCTGGCGAGACAGCTTTCCATCAGTCACACGACTGTAGAACg < 1:2270090/140‑1 (MQ=255) cTGGATATTCCGTTTTATCAGCAGCTTTATCTCTATTTCAAAGAAAACAGGAATCAGGGGCGTATTAAAAAAGGAATGACGCTCCCTTCAAAACGACTCCTGGCGAGTCAGCTTACCATCAGTCAAACGACTGTAGAACg < 2:1501704/140‑1 (MQ=255) cTGGATATTCCGCTTTATCAGCTGCTTTATCGCTATTTAAAAGAAAACATGAATCAGGGGGGTTTTCAAAAAGGAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACg < 2:1957721/140‑1 (MQ=255) ggATATGCCGCTTTATCCCCCGCTTTATCGATATTTAAAAGAAAACATGCAGCTGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAACGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTg < 2:2051855/140‑1 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAATCATGCATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 1:760030/1‑140 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 2:711501/1‑140 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 1:311875/1‑140 (MQ=255) cgttttATCAGCAGCTTTAGCGCTATTTCAAACAAAACAGGCATCCGGGGCTTATACAAAAAGGAATGAAGCTCCCTTCCAAACCACGCCGGGCGAGTCAGCTTACCAGCAGTCACACGACTGTAGAACGTGCCTATGaa < 2:747042/137‑1 (MQ=255) cgatttAACAGAAGCTTTAGCGCTATTTCAAACAAAACATGCATCAGGGGCGTATACAAAAAGGATTGAAGCTCCCTTCCAAACCCCGCCTGGCGCGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGaa < 2:1699958/137‑1 (MQ=255) cGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACTTCAATCTGGGGCTTTTTCAAAATGTAATGATGCTCCCTTCAAAAAGACACCTGGCGTGTAAGCTTTCCAACAGTCAAACGACTGTAGAACGTGCCTATGaa < 2:2015341/140‑1 (MQ=255) cGCTTTATCAGCAGCTTTAGCGCTATTTAAAACAAAACATGCATCAGGGGCGTATTAAAAAAGCAATGACGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGaa < 2:1561033/140‑1 (MQ=255) cTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGa < 2:2621826/118‑1 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 1:1840839/1‑140 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 2:1507472/1‑140 (MQ=255) ttATCAGCATGTTTATCGCTTTTTCAAACAAAACAGGCATCGGGGGCGTATTAAAAACGCAATGAAGCTCCCTTCCAAACGACGCCTGGCGAGTCAGGTTTCCACCAGACAAACGACTGTAGAACGTGCCTATGAACAGc < 2:318602/140‑1 (MQ=255) ttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGTAATGAAGCTCCCTTCCAAACGACTCCTGGCGAGTCAGCTTTCCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGc < 2:536550/140‑1 (MQ=255) ttATCAGCAGCTTTATCGATATTTCAAATAAAACATGCAACAGGGGCGTATTCAAAAAGTAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCAACAGTCAAACGACTGTAGAACGTGCCTATGAACAGc < 2:645716/140‑1 (MQ=255) tCAGCAGCTTTATCGATATTTCAAACAAAACATCCATCCGGGGCTTATACAAAAAGTAATGAAGCTCCCTTCCAAACCACTCCTGGCGAGTCAGCTTGCCAACAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtg < 1:1290219/140‑1 (MQ=255) tCAGCAGATTTTTCGTTTTTTAAAATAAAACATGAATCCGGGGCGTATCAAAAATGGAATGAAGCTCCATTCCAAACGCCTCCTGGCGAGTCAGCTTTCCTTCATTCAAACGACTGTAGAACGTGCCTATGAACAGCTtg < 2:2202945/140‑1 (MQ=255) agttttATCGCTATTACAAATAAAACATGCATCAGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACCCCTGGCGAGTCAGCTTTCAATCCGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1421481/137‑1 (MQ=255) agcTTTATCGCTTTTTCACTTAAAACAGGCATCCGGGGCGTTTTCAAAACGGAATGACGCTCCCTTCCAACCGCCGCCTGGCGAGTCAGCTTGCCACCCGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:2668996/140‑1 (MQ=255) agcTTTATCGCTATTTCAAATAAAAAATGCATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAACCACTCCTGGCGAGACAGCTTTCCCTCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1323364/140‑1 (MQ=255) agcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACCCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:118128/140‑1 (MQ=255) agcTTTATCGCTATTACAAAGAAAACAGGCATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTCCCAAACCCCGCCTGGCGTGTCAGCTTGCCATCCGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1078689/140‑1 (MQ=255) agcTTTATCGATATTTCAAAGAAAACATGCATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACGCCTGGCGAGTCAGCTTTCCAACAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:2519781/140‑1 (MQ=255) agcTTTATCGATAGTTCAAACACAACAGGCATCAGGGGCGTATTCAAATCGCAATGAAGCCCCCTTCCAAAAGACTCCCGGCGAGTCAGCTGTCCATCCCCCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1622468/140‑1 (MQ=255) agcTTTACCGCAATTCCAAACAAAACATGCACCCGGGGCGTATTCAACAAGGAAGGCCCCCCCCTCCCCACCCACGCCTGCCGCGACAGCTTGCCATCAGTAAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1764981/140‑1 (MQ=255) agatttATCGCTTTTTAAAACAAAAAATGAATCCGGGGCTTATACAAAAAGCAATCAAGCTCCCTACCAAACCACGCCTGGCGAGTCAGCTTACCACCCCTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1409598/137‑1 (MQ=255) agatttATCGCTATTTCAAACAAAACATGCATCAGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:2572323/137‑1 (MQ=255) agatttATCGATATTTCAACCAAAACATGCATCCGGGGCTTATAAAAAAAGTATTGAAGCTCCCTTCAAAAACACCCCGGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2233322/137‑1 (MQ=255) acttttATCGCTATTACCAAAAAAACAGCCACCAGGGGCTTATTAAAAAAGGACTCAAGCTCCCTCCCAAAACACTCGTGGCGCGAACGCTTACAATCAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:409087/137‑1 (MQ=255) accTTTATCCCTATTTCACACAAAACATGCATCTGGGGCGTATCAAAAAATGAATCAAGCTCCCTACCAAAAGCCTCCTGCCGAGTCTCCTTTCCATCCGCCCCACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:78385/138‑1 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg > 1:2380406/1‑140 (MQ=255) cTTTATCGCTATTTCAAAGAAAACCTGCATCAGGGGCTTATTCAAAACGGAATGACGCCCCCTTCCAAACCCCTCCTGGCGAGTCAGCTTTCCAACAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:863706/140‑1 (MQ=255) cTTTAGCGCTATTTCAAAGAAAACCTGCATCCGGGGCGTCTTCAAAACGGCATGAAGCTCCCTTCCAAACCCCTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:340918/140‑1 (MQ=255) cTTTAGCGCAATTTCAAACAAACAATCACTCCGGGGCTTTTTCAAAAAGGATTTATGAGCCCTTCAAAAAGACTCCGGGCGAGTCACCTTCCCATCAGAAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2280298/140‑1 (MQ=255) atttATCGCTATTAAAAACAAAACATGCATCAGGGGCGTATACAAAAAGGAATTAAGCTCCCTTCCAAAACCCCCCTGCCGAGTCAGCTTTCCATCAGTAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2576476/139‑1 (MQ=255) aTTTCAAAGAAAACATGCATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGATTGATGCTGAGGGCTATATc > 2:1701942/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 1:698504/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:2621949/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:1277026/1‑140 (MQ=255) tttCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGACTGAAGCTCCCTTCCAAAAGTCTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCGGAGGGCTATATCg > 2:2597386/1‑140 (MQ=255) tttCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCg > 2:1330008/1‑140 (MQ=255) ttCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTTGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAAAGTGCCTATGAACAGCTTTCTGCTGAGGGCTATATCGt > 2:372467/1‑140 (MQ=255) aataaaaaaTGAATCCGGGGCGTATAAAAAAAGTAATGAAGCGCCCTTCCAAAAGACTCGTGGCGAGTCAGCTTCCCATCAGAAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:1043585/137‑1 (MQ=255) aataaaaCTTGCATCTGGGGCTTATTAAAAAAGGATTGATGCTCCCTTCAAAAATACTCCTGGCGATTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:2564672/137‑1 (MQ=255) aataaaaCATGCATCTGGGGTTTATAAAAAATGTAATGAAGCCCCCTACAAAAAGACTCGTGGCGATTCTGTTTTCAATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:361190/137‑1 (MQ=255) aaaaaaaCATGCATCCGGGGGTTTTTAAAAAAGGATTTCAGCGCCCTCCCAAACGACTCCGGGCGAGACAGCTTTCAATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:366420/137‑1 (MQ=255) aaGACAACATCCATCCGGGGCGTATTCAAAACGGAATGACGCGCCTTTCCACACCACGCCGGGCGATGCAGCTTGCCAACCGGCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:1462713/140‑1 (MQ=255) aaGAAAACATGCATCCGGGGCGTATTCAAAAAGGAATGACGCTCCCTTCCAAACCACGCCGGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:2316466/140‑1 (MQ=255) aaGAAAACATGCATCCGGGGCGTATAAAAAACGGAATTACGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:1350837/140‑1 (MQ=255) aaGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATTAACAGCTTGCTGCTGAGGGCTATATCGTGAGc > 2:186642/1‑140 (MQ=255) aaCATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGcc > 1:1419127/1‑140 (MQ=255) atccATCAGGGGCTTATTCAAAAAGGAATGAAGCTCCCTTCAAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaag < 2:26692/137‑1 (MQ=255) aTCCGGGGCGTATTCAAAAAGGAATGACGCTCCCTACCAAAACACTCCGGGCGAGTCAGCTTCCCAACAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGc < 1:1992198/140‑1 (MQ=255) cAGGGGCGTATTCAAAAATCAATGAAGCTCCCTTCCAAAACACCCCGGGCCAGTCAGCTTTCCATCAGTCCCACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCgg < 1:1529624/140‑1 (MQ=255) ggggCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGAt > 1:1261903/1‑140 (MQ=255) cGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAATCGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGtt > 2:1652845/1‑140 (MQ=255) cGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGtt > 1:2588691/1‑140 (MQ=255) tagacAAACAGCAATGACGCTCCCTCCCCAACGACCCGGGGCCCGGCAGCTTCCCAGCAGGCACACGACTGTAGAACGTGCCTATGACCAGCTTGCTGCGGAGGGCTATATCGTGAGGCAGCCAAGAAGCGGATGGTTTg < 1:736572/136‑1 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:2685911/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:927876/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:2176164/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:2510234/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:926719/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:2148647/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:1342618/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCGATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:466629/1‑140 (MQ=255) aTTCAAAACCCAATGAAGCGCCCTTCCAAAAGACTCCTGGCCAGTCAGCTTGCCATCCGGAACACGACTGTAGAACGTGCCTATGAACAGCTTGCAGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGc < 1:2623670/140‑1 (MQ=255) aTTCAAAAAGCAATGACGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCCGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGc < 1:2643618/140‑1 (MQ=255) aTTAAAAAAGGAATGAAGCTCCCTTCAAAAAGACTCGTGGCGTGTCAGCTTTCCATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGc < 1:1656436/140‑1 (MQ=255) aTTAAAAAAGGAATGAAGCTCCCTCCCAAACCACTCCGGGGGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGc < 1:2480244/140‑1 (MQ=255) aaaaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt > 1:1882393/1‑140 (MQ=255) aaaaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt > 1:1718706/1‑140 (MQ=255) ggAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCa > 2:2370775/1‑140 (MQ=255) gcaaTGAAGCTCCCTGCCAAAAGCCCCCGGGCGATTCAGCTTTCACTACGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCCGAGGGCTATAACGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCa < 1:1459646/138‑1 (MQ=255) aacaGACTCCTGGCGAGTCAGCTGTCCATCATACACACGACTGTAGAACGTGCCTATCAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa < 2:2100845/137‑1 (MQ=255) aaacGACTCGGGGCGATTCTGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa < 1:1008378/140‑1 (MQ=255) aaaaCACTCCTGGCGAGTCAGCTTTCCAGCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa < 1:2357629/140‑1 (MQ=255) cTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaa > 2:524298/1‑140 (MQ=255) cTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTa > 2:2093338/1‑139 (MQ=255) cTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTa < 1:2093338/139‑1 (MQ=255) ccTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaaaa > 1:1977521/1‑140 (MQ=255) gCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATAcc < 1:1119336/140‑1 (MQ=255) gCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATAcc < 1:711501/140‑1 (MQ=255) gCGAGTCAGATTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATAcc < 1:1050685/140‑1 (MQ=255) cGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCa < 1:1342618/140‑1 (MQ=255) aGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCAt > 2:1833207/1‑104 (MQ=255) tCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCAcc > 1:1792750/1‑140 (MQ=255) cATCACTAAAACGACTGTAGAACTTTAATATTAACAGATTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACAAAGCGCATAACCaa > 2:968616/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 1:2016953/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 2:2340997/1‑140 (MQ=255) | TTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCAA > NZ_CP034943/549006‑549279 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |