Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0520TG24.1% 203.5 / 15.2 113E573D (GAA→GAC) ‡EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base T (39/46);  new base G (27/0);  total (67/46)
Fisher's exact test for biased strand distribution p-value = 4.39e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 114 total aligned reads displayed.

TGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAAT  >  NZ_CP034943/633921‑634188
                                                                                                                                   |                                                                                                                                        
    tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTc                                                                                                                              >  2:708906/1‑140 (MQ=255)
    tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTc                                                                                                                              >  2:1363038/1‑140 (MQ=255)
    tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTATTTCtttttg                                                                                                                              >  2:2566770/1‑139 (MQ=255)
     ggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTCTTTGtttttga                                                                                                                             >  2:133257/1‑138 (MQ=255)
      gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTATTTCTTTTTGCa                                                                                                                            >  2:318313/1‑140 (MQ=255)
      gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTCCa                                                                                                                            >  2:2069465/1‑140 (MQ=255)
       cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                           <  2:667229/140‑1 (MQ=255)
       cTTGGACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                           <  2:515081/140‑1 (MQ=255)
        ttGTACCTTTTCATGGTCTGGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGTCCAGGGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGCGGGGTTTCTTTGTCCAtt                                                                                                                          >  1:594166/1‑140 (MQ=255)
           tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTGCTTTATTTTTACATTCtt                                                                                                                       >  2:2612884/1‑140 (MQ=255)
            aCCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGATCTTTATTTTTACaatttat                                                                                                                      >  2:1362301/1‑134 (MQ=255)
                tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGTGTTTGCAGTGtttttgt                                                                                                                  >  1:809640/1‑138 (MQ=255)
                tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTGTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGTGTCGTGGGGGTGGGTTCTTTTTACCTTGTTTttct                                                                                                                  >  2:2260082/1‑140 (MQ=255)
                 ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTGTTTGTTTTTTCGATCTTTttgtt                                                                                                                 >  1:1042524/1‑140 (MQ=255)
                 ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTGTTTTTGCATTATTTttatt                                                                                                                 >  2:399390/1‑140 (MQ=255)
                 ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTGTTTTTGCATTATTTttatt                                                                                                                 >  2:196909/1‑140 (MQ=255)
                 ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCATTGTTTttatt                                                                                                                 >  1:2352690/1‑140 (MQ=255)
                 ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttctt                                                                                                                 <  1:279999/140‑1 (MQ=255)
                 ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCGTTCTTTTTGCAGTCTTTttgtt                                                                                                                 >  1:1736817/1‑140 (MQ=255)
                 ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATAGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTATTTGTTTTTAAATTATTTttatt                                                                                                                 >  2:104223/1‑140 (MQ=255)
                        tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCAATTATATttattattaaaa                                                                                                          >  2:2165815/1‑136 (MQ=255)
                            gATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTGGATTCTTTTTCTTCTTGAAATgta                                                                                                      >  2:950230/1‑138 (MQ=255)
                            gATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGaa                                                                                                      <  1:2194731/140‑1 (MQ=255)
                                gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                  <  1:2566770/140‑1 (MQ=255)
                                gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                  <  2:1243199/140‑1 (MQ=255)
                                 aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTATTTTTTCATTGTTTTTGTTATTTATATGaaaggtt                                                                                                 >  1:1038495/1‑135 (MQ=255)
                                 aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGttt                                                                                                 <  1:1743522/140‑1 (MQ=255)
                                  tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTTTGTTCTTCATATGAACGtttt                                                                                                >  2:1884489/1‑140 (MQ=255)
                                  tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTACATTATTTTTGTTGTTAATATTAAAGtttt                                                                                                >  2:981865/1‑140 (MQ=255)
                                    tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCATTGTTTTTTTTCTTAATTTTAACGtttttt                                                                                              >  1:2213949/1‑138 (MQ=255)
                                       ggATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCACTGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTc                                                                                           <  2:1666398/140‑1 (MQ=255)
                                       ggATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTc                                                                                           <  2:60349/140‑1 (MQ=255)
                                                     ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTGCTTTCTTTTTGCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAg                                                                             >  2:1764265/1‑140 (MQ=255)
                                                     ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAg                                                                             <  1:1884489/140‑1 (MQ=255)
                                                     ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAg                                                                             <  1:981865/140‑1 (MQ=255)
                                                     ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTATTTTTATTCTTAAAATGAACGTTTTTAGTCAGGCTTTACCGAAg                                                                             >  2:2616605/1‑140 (MQ=255)
                                                       cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCGATTGTTTTTCTTCTTCCTATGAAGGTTTTGAGTGAGGGTTAAACGAAGCa                                                                           >  2:2369862/1‑140 (MQ=255)
                                                       cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCGTTCTTTTTGCATTCTTTTTATTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCa                                                                           >  2:303878/1‑140 (MQ=255)
                                                          cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGCGTGGGTGGCGTGGTTTGGTTTTGGATTCTTTTTGTTATTCCCAGTCACGGTTTGTGGGAGGCTTAAACGAAGCCGGc                                                                        >  1:1160629/1‑140 (MQ=255)
                                                          cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGGTTGTTTTTGGCTTGTTTTTGTTGTTGATATGTAAGTTTTTTTTCAGGCTTTAAAGAAGCAGGc                                                                        >  1:2205912/1‑140 (MQ=255)
                                                             tATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCCTTATTTTTCTTCTTAATATTAAACTTTTGATTACTGCGTAACCGAAACAGGCGtt                                                                     >  2:2628293/1‑140 (MQ=255)
                                                             tATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCCTTCTTTTTGTTGTTCATATTAACGTTTTTATTCCGGCTTAACCGAAGCAGGCGtt                                                                     >  2:562614/1‑140 (MQ=255)
                                                               tGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCCTTATGTTTGTTCTTAATATGAACGTTTTGAGTCAGGCTTAACCGAAGCACGCGtttt                                                                   >  2:1450713/1‑140 (MQ=255)
                                                                 aCTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTGCTTTCTTTTTCCATTGTTTTTATTCTTAAAATGAACGTTTTTAGTCAGGCTTAACAGAAGCAGGCGtttttt                                                                 >  2:535884/1‑140 (MQ=255)
                                                                    aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTGAAATCTTTTTTTTATTAATATTAACGTTTTTATTCAGGCTTAAACGAAGCAGGCGTTTTTTAgg                                                              >  2:871039/1‑140 (MQ=255)
                                                                    aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTTTTTCTTTTTCCCTTGGTTTTGTTCTTAATATGAAAGTTTTTGTTAATGCTTAACAGAAACAGGCGttttttgtg                                                              >  2:1919791/1‑137 (MQ=255)
                                                                    aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTAAATCCGACGGAGTCGTTGGCGGTGGTTATTTTTGCCATATTTTTTTTGTTAATATTGAAGTGTTTAGTCAAGCTTAAACGAATCAAGCGTTTTTTTgg                                                              >  1:2576300/1‑140 (MQ=255)
                                                                     aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGGATTGTTTTTATTGTTGATATTTAACTTTTTAGTGGGGCTTAACAGAAGCAGGCGgtttttgtgt                                                             >  1:2445437/1‑136 (MQ=255)
                                                                     aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                             <  2:2180941/140‑1 (MQ=255)
                                                                     aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                             <  2:729816/140‑1 (MQ=255)
                                                                      tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt                                                            <  1:2229468/140‑1 (MQ=255)
                                                                      tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTGTTTTTGTTCTTCAAATGAACGTTTTGAGTCAGGGTTAACCGAATCAGGCGTTTTTTCGGAt                                                            >  2:2349936/1‑140 (MQ=255)
                                                                      tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGTTCTTTTTCAATTCTATTTCTTCTTCATATTAACGTTTTTAGTGAGGCATAACCGAAACAGGCGTTTTTTGGGAt                                                            >  2:2493861/1‑140 (MQ=255)
                                                                      tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTCTTTTTCTTCTTCAAATGAACGTTTTTAGTGAGGCTTAAACGAAACAGGCGTTTTTTCGGAt                                                            >  2:1983360/1‑140 (MQ=255)
                                                                      tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTCTTTGTTTTTGCATTGTTTTTGTTGTTAAAAATAACGTTTTGAGTGAGGGTTAAACGAAGCAGGCGTTTTTTgggct                                                            >  1:2314129/1‑138 (MQ=255)
                                                                      tGTTTTCTTAAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt                                                            <  2:823688/140‑1 (MQ=255)
                                                                           tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGGTTCGTTTTGCCGTGTTTTTCTGGTTCAGATTAAAGGTTTGAGTGCGGCTGTAGCGTAGCGGGCGGGTTTTGGGGTTGctg                                                       >  1:1945913/1‑139 (MQ=255)
                                                                             ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTGTTTATTTTTGAATTCTTTTTATTATTAATATTAAACTTTTTAGTCAGTCATAAACGAAACAAGAGTTTTTTAAGATTAATCtt                                                     >  2:1031162/1‑140 (MQ=255)
                                                                             ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTATTTTTACATTCATTTTGTTATTCATATTAAAGTTTTTAGTAACGCTTAAACGAAACAGGCGTTTTTTAGGCTTACTCtt                                                     >  2:520724/1‑140 (MQ=255)
                                                                             ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGGATTTTTTTTGTTGTTTATATTTAAGGTTTTTGTGAGGGTTAAACCGACCACGCGTTTTTTGGGGTTGctcgt                                                     >  1:2467416/1‑138 (MQ=255)
                                                                                 aTGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGGTTTTGCATTGTTTTTATTGTTCATATGAACGTTTTGTGTGAGGCTTTAACGAAGCAGGCGTTTTTTCGGGTTGCTGGTGCTg                                                 >  1:1985130/1‑140 (MQ=255)
                                                                                     tttGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTCTTTTTGCATTATTTTTCTTATTAATATGAACGTTTTGAGTGAGGCTTAAAAGAAACAGGCGTTTTTTAGGATTACTCTTGGAGAtta                                             >  2:702142/1‑139 (MQ=255)
                                                                                       tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGCATTGTTTTTTTTGTTGATATGTAAGTTTTTTGTGAGGGTTTAACCAATCAGGCGGTTTTTGTGGTTGCTCTTGCTGGTTAAt                                           >  1:1417229/1‑140 (MQ=255)
                                                                                        gAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTGTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCAtt                                          <  1:196909/140‑1 (MQ=255)
                                                                                            aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                      <  2:147540/140‑1 (MQ=255)
                                                                                            aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                      <  1:2612884/140‑1 (MQ=255)
                                                                                             gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc                                     <  1:562614/140‑1 (MQ=255)
                                                                                             gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc                                     <  1:1291768/140‑1 (MQ=255)
                                                                                              tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGGTGTTTGTTTTTGCAATTTTTTTTTTCGTAATATGAAAGTTTTTATTGAGGCTTAACCCAAGGAGGCGGTTTTTAGGGTTACTCGTGCTGTTTCAatttgtaa                                    >  1:141472/1‑136 (MQ=255)
                                                                                              tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTCCAGTCTTTTTCTTATTCATATGAAAGTTTTGAGTCAGGCTTAAACCAAGCATGCCTTTTTTAGGATTAATCGTTCTGATTAATATtctca                                    >  2:2238932/1‑139 (MQ=255)
                                                                                              tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCATTCTTTTTATTATTCATATTAACCTTTTGAGTCAGGCTTAAACCAATCAGGCGTTTTTTAGGATTACTATTTCTGTTTAATTTtgtca                                    >  2:2440147/1‑139 (MQ=255)
                                                                                              tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTTTTTTGTTTTTTCATTGTTTTTGTTGTTGATATGTACGTTTTTTGTAACGCGTTACCCAAGCACGCGTTTTTTTGGATTGCGCTTTGTGATTGAttttttgc                                    >  1:2341498/1‑136 (MQ=255)
                                                                                              tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGGTTGTGCCTTCTTTTTGGTCTTGATTTTTAAGTTTTGTGTCACGGGTAAACGTAGGCGGGGTTTGTTTGGATTCCGGTTGGTGGTTGATTTTGTcc                                    >  1:657794/1‑140 (MQ=255)
                                                                                              aggCATCAATTTCTTCAATCCGACGGATTCGTTTGCCTTGTTTATTTTTCCAATCTTTATCTTATTAATATGAAAGTTTTTAGTATAGGTTAAAACAAGCAGGCGTTTTTTAGGATTACTCTTGGGTATTCAttttatgc                                    >  2:589950/2‑136 (MQ=255)
                                                                                                gCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTCCCTTCTTTTTCTTGTTAATATGAACGTTTTGAGTCACGCTTAACCGAAGCAGGCGTTTTTTCGGATTACTCTTGATGATTAATTTTCTCCaa                                  >  2:2109755/1‑140 (MQ=255)
                                                                                                gCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGGTTTCTTTTTGCAATATTTTTTTTAGTGAAATTTACGGTTTTAGTCAGGCTTAAAAGAAGCAGGCGATTTTTGGGGTTACTCTTTGTGGTTAATTTTGTGCaa                                  >  2:831444/1‑140 (MQ=255)
                                                                                                   tCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCCATTGTTTTTCTTCTTCATATTAACGTTTTTAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGATTACTCTTGCTGATTCATTTTATCCAAtta                               >  2:1892190/1‑139 (MQ=255)
                                                                                                   tCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTATTTTTCTTCTTAATATGAACGTTTTTTTTAATGGTTAACCGAAGCACGGGTTTTTTTGGAATACTGGTTGTGATTGATTATCTCGAAttg                               >  2:1902450/1‑139 (MQ=255)
                                                                                                   tCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTACCTTCAGTTTCGTATTCAAAGTAACGTTTTTAGTGAGGCTTTACCCGAGCAGGCCTTTTTTCGGGTTACGCGTACTGAGTCAGTTTAACCAAtag                               >  2:1880386/1‑138 (MQ=255)
                                                                                                   tCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCAGTCTTTTTGTTCTTCATATGAACGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGATTCCGCTTTCTGTTTGATTTTGTGCaagta                               >  2:2221601/1‑137 (MQ=255)
                                                                                                   tCAAGTTCTTCAATCCGACGGAGTCGTTGGGGGGCTTTGTGTTTGCATTCTTTTTGGTGGGAATATGAACCTTTTTAGGAAGGGGTTAACGAAGCCCGGGTTTTTTGGGATTGCTGTTGGGTCTTGATTTTGTCCAAATc                               >  2:2072115/1‑140 (MQ=255)
                                                                                                     aaTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCaa                             <  2:2676363/140‑1 (MQ=255)
                                                                                                      aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGCACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                            <  2:217158/140‑1 (MQ=255)
                                                                                                      aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                            <  2:883969/140‑1 (MQ=255)
                                                                                                      aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                            <  2:882630/140‑1 (MQ=255)
                                                                                                      aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                            <  1:535884/140‑1 (MQ=255)
                                                                                                        ttcttcAATCCGACGGAGTCGTTGGCGGGCGTTGTTTTTGCATTATTTTTCTTCTTGATATTAACGTTTTGAGTCAGGCTTTAACGAAGCAGGCGTTTTTTGGGATTACAATTTCTGATTCATTTTGTCCAATTAAAact                          >  2:632780/1‑140 (MQ=255)
                                                                                                           ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                       <  1:2656484/140‑1 (MQ=255)
                                                                                                           ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                       <  1:213892/140‑1 (MQ=255)
                                                                                                           ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCATCTTGCTGATTCATTTTCTCCAATTCAAgctgct                       <  1:2575421/140‑1 (MQ=255)
                                                                                                           ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCAATTCTTTTTCTTCTTCATATGAAAGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                       <  2:671221/140‑1 (MQ=255)
                                                                                                                     cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt             <  2:2467416/140‑1 (MQ=255)
                                                                                                                     cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt             <  2:1038495/140‑1 (MQ=255)
                                                                                                                     cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt             <  2:1023819/140‑1 (MQ=255)
                                                                                                                       gAGTCGTTGGCTTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct           <  1:104223/140‑1 (MQ=255)
                                                                                                                       gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct           <  2:1271240/140‑1 (MQ=255)
                                                                                                                       gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct           <  2:1945913/140‑1 (MQ=255)
                                                                                                                       gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct           <  2:448661/140‑1 (MQ=255)
                                                                                                                       gAGTCGTTGGCGTTCGTTCTTTGTCCAGTCTTTTTCTTCTTCATATGAACGTTGTGAGTCAGGCTTAACCGAAGCAGGCGTTTGTTCGGAGTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct           <  1:1320713/140‑1 (MQ=255)
                                                                                                                                gCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataat  <  1:2616605/140‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                        
TGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAAT  >  NZ_CP034943/633921‑634188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑