Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349433,394,3670CG23.4% 412.3 / 22.1 172G178A (GGA→GCA) ppaXpyrophosphatase PpaX
Reads supporting (aligned to +/- strand):  ref base C (30/98);  new base G (39/0);  total (74/98)
Fisher's exact test for biased strand distribution p-value = 1.65e-19
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 172 total aligned reads displayed.

GATCTGTTTTTCTCACAGATTACTTCACTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGCCATCGTCACATCATCA  >  NZ_CP034943/3394230‑3394498
                                                                                                                                         |                                                                                                                                   
gATCTGTTTTTCTCACAGATTACTTCACTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCg                                                                                                                                   <  1:27682/140‑1 (MQ=255)
  tCTGTTTTTCTCACAGATTACTTCACTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGc                                                                                                                                 >  2:373727/1‑140 (MQ=255)
  tCTGTTTTTCTCACAGATTACTTCACTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGc                                                                                                                                 >  2:1669643/1‑140 (MQ=255)
  tCTGTTTTTCTCACAGATTACTTCACTCCAACGATTTGTAATAGATCACTCAATTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGc                                                                                                                                 >  1:2361829/1‑140 (MQ=255)
    tGTTTTTCTCACAGATTACTTCACTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGt                                                                                                                               >  2:789367/1‑140 (MQ=255)
      tttttCTCACAGATTACTTCACTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGttt                                                                                                                             <  1:1969086/140‑1 (MQ=255)
         ttCTCACAGATTACTTCACTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTc                                                                                                                          <  1:833754/140‑1 (MQ=255)
                aGATTACTTCACTCCAACGATTTGTAATCGATCACTCATTTTCTCAAGCATATAATCAGGCGCATGCTTTGCCAGTGTTTCCGGCCCTGTACTCGTCCATGCGACTCCGGCCGTTTTGTGTCCGGGGTTGTTCGCGGccc                                                                                                                   >  1:571611/1‑139 (MQ=255)
                 gATTACTTCACTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAg                                                                                                                  <  1:1153945/140‑1 (MQ=255)
                   ttACTTCACTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGca                                                                                                                <  1:2312339/140‑1 (MQ=255)
                          aCTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTg                                                                                                         <  2:885320/140‑1 (MQ=255)
                          aCTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTg                                                                                                         <  2:120609/140‑1 (MQ=255)
                          aCTCCAACGATTTGTAATAGATCACTCACTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTg                                                                                                         <  2:2361829/140‑1 (MQ=255)
                            tCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCTTCCATGCGACTCCGGCCGTTTTTTTTCCGGCCTTTTTCCCTGCCAGCACATAGTggg                                                                                                       >  2:2091506/1‑139 (MQ=255)
                            tCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTTTTGCGGCGTGTTTACCTGCCAGCACAACGTGGt                                                                                                       >  1:2194945/1‑140 (MQ=255)
                            tCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTTTTGAGGGGTTTTTCCCTGCCCGCACAACGTGGt                                                                                                       >  2:1454464/1‑140 (MQ=255)
                            tCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTGCGGCGTTTTTGCCGGCCCGCACAACCTGGt                                                                                                       >  1:2104391/1‑140 (MQ=255)
                                 cGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCCGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGGCGTGTTTGTTGCGGCGTTTTTGCCGGCCCGCACATCGTGGTAATTa                                                                                                  >  1:1145381/1‑140 (MQ=255)
                                 cGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTTTTGCGGCGTTTTTGCCGGCCCCCACAACGGGGTAAGTa                                                                                                  >  1:1944612/1‑140 (MQ=255)
                                      tGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTGCGGCGTTTTTGCCTGCCAGCACCGGGTGGTAATTATCTcc                                                                                             >  2:1781204/1‑140 (MQ=255)
                                      tGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTcc                                                                                             <  1:2647122/140‑1 (MQ=255)
                                      tGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTcc                                                                                             <  1:1669643/140‑1 (MQ=255)
                                      tGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTcc                                                                                             <  1:1214568/140‑1 (MQ=255)
                                      tGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTTTTGAGGCGTTTTTACCGTCCACCAAAAAGTGGTAATTaataac                                                                                             >  1:2488563/1‑135 (MQ=255)
                                      ggTAATAGATCACTCATTTTCTCACGCATATACTCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATGTTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTTGTAATTATCTcc                                                                                             <  1:1074344/139‑1 (MQ=255)
                                        tAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCTGCCATTTACTCGTACATGCGAATCCGGACGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGa                                                                                           <  1:1291831/140‑1 (MQ=255)
                                             gATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTGTTCCGGCGTGTTTCGCTGCCAGCACAACGTGGTGAATATCTCCGACCATa                                                                                      >  2:1136846/1‑140 (MQ=255)
                                              aTCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTGTTTTGCGGCGTTTTTACCAGAAAGCACAACGGGGTAATTATCTACCAACATaa                                                                                     >  2:509464/1‑140 (MQ=255)
                                                cACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTGTTCCGGCGTTTTTGCCTGCCAGCACAACGTGGTAATTATATCCGACCaaaaat                                                                                   >  1:939082/1‑138 (MQ=255)
                                                  cTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTTTTGCGGGGTTTTTACCTGCCAGCACATCGTGGTAATTATCTCCGACCCTAAAGGc                                                                                 >  2:1472009/1‑140 (MQ=255)
                                                  cTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTTTTGCGGGGTGTTTGACGGCCAGCACCACGGGGTAAGTATCTCCGCCCAAAATTGc                                                                                 >  1:777749/1‑140 (MQ=255)
                                                  cTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTGTTGCGGCGTTTTTGCCGGCCACCCCAACGTGGTAAATATATCCCACCaaaaatgg                                                                                 >  1:431901/1‑136 (MQ=255)
                                                  cTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTGTTGCGGCGTTTTTCCCTGCCAGCACAGCGGGGTAATTATCTCCGAGCCTAATggg                                                                                 >  2:2676266/1‑139 (MQ=255)
                                                        ttCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTccgc                                                                           <  1:2336831/140‑1 (MQ=255)
                                                        ttCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTTTTGCGGCGTTTTTGGCGGCCCCCACACCGTGGGTATTATATCCGACCACAAAGGcggaccc                                                                           >  1:690578/1‑134 (MQ=255)
                                                        ttCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTGTTGCGGCGGTTTTGCCGGCCCGCACAGCGTGGTGATTATTTGCGACCCTAAAGGCTTgcgc                                                                           >  1:726894/1‑140 (MQ=255)
                                                         tctcAAGCATATAATCAGGCTCAGGCTTTGCCAGTGTTTCCGGCCCTGTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTccgcc                                                                          <  2:1702510/140‑1 (MQ=255)
                                                             aaGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCt                                                                      <  1:655884/140‑1 (MQ=255)
                                                             aaGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCt                                                                      <  2:691054/140‑1 (MQ=255)
                                                               gCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCg                                                                    <  2:497566/140‑1 (MQ=255)
                                                               gCATATAATCAGGCTCATGCGTTGCCAGTGTTTCCGGCCCTTTAATCGGCCAGGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCg                                                                    <  2:2704266/140‑1 (MQ=255)
                                                                     aaTCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCt                                                              <  1:176793/140‑1 (MQ=255)
                                                                         aGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGGGTTTTTCCCTGCCAGCACATCGTGGTAATTATATGCGACCATAATGGGGTACGCCGGCTCGCTTCCTAGCt                                                          >  2:1742658/1‑140 (MQ=255)
                                                                         aGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTGTTGCGGGGGTTTTGCCGGGCCGCACCAACTGGTTATTATCTACGACCCAAAAGGCGTCCCCCCGCGCGCGTCCGAGcg                                                          >  1:791637/1‑139 (MQ=255)
                                                                          ggCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTTTTGCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATATACCACCATAATTGCTTCCGCCGGCTCGCGTCCAATCTg                                                         >  2:1057499/1‑140 (MQ=255)
                                                                          ggCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTTTTCCCGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTg                                                         >  2:37389/1‑140 (MQ=255)
                                                                          ggCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTGCGGCGTTTTTACCGGCCACCAAAACGTGGTAATTATCTACGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTg                                                         >  2:2448853/1‑140 (MQ=255)
                                                                           gCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTTTTCCGGCGTTTTTACCTGCCAGCCCAACGTGGTAAATATATCCCACCAAAAAGGCTTACGCCCGCTCGCGTCCTAGCTGt                                                        >  1:1584348/1‑140 (MQ=255)
                                                                           gCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACCTCGTGGTAATTATCTCCGACCATAATTGCTTCCGCCGGCTCGCGTCCTAGCGGt                                                        >  2:55515/1‑140 (MQ=255)
                                                                           gCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTTTTGCGGGGTTTTTGGCGGCCAGCCCAGCCGGGTCATTATGTCCGACCCGAAAGGCGTCCGCCGGCGCGCGTCCTAGCGGt                                                        >  1:1023722/1‑140 (MQ=255)
                                                                           gCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTGTTGCGGCGGTTTTCCCTGCCCGCACATCGTGGTAATTATATCCGCCCATAAAGGCTTCCGCCGGCTCGCGTCCTAGCAGt                                                        >  1:2524553/1‑140 (MQ=255)
                                                                           gCTCATGCTTTGCCAGGGTTACCGGCCCTTTAATAGTCCATGCGACTCCGGCCGTTTTTGTTACGGCGTTTTTCGCTGCAACCACCAAGTGGTCAATATCTACGACCATAATGGGTTCCGCCGGCTCGCTGACTAGCTGt                                                        >  2:1113360/1‑140 (MQ=255)
                                                                              cATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTc                                                     <  2:1154112/140‑1 (MQ=255)
                                                                               aTGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTTTTGCGGGGTTTTTGCCGGCCCGCACATCGGGGTAAATATCTCCGACCATAATTGCTTCCGCCGGCGCGCGTCCTAGCTGtttga                                                    >  1:625633/1‑138 (MQ=255)
                                                                               aTGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCa                                                    <  2:1522214/140‑1 (MQ=255)
                                                                               aTGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCa                                                    <  1:1776969/140‑1 (MQ=255)
                                                                               aTGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTTTTTGGGCGTTTTTGGCGGCCCGCACATACGGGTAAATAAATGCGACCAAAAAGTGTTACCGCGCCTCGCTTCCTAGCTGtttta                                                    >  1:1823938/1‑138 (MQ=255)
                                                                                tGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTTTTGCGGCGGTTTTCCCTTCCACCACATCGGGGTAATTATATACGACCATAAAGGCGTCCCCCCGCGCGCGTACGATCTGTTTCAg                                                   >  2:487858/1‑140 (MQ=255)
                                                                                    ttGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCt                                               <  1:2710101/140‑1 (MQ=255)
                                                                                    ttGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCt                                               <  2:2127722/140‑1 (MQ=255)
                                                                                    ttGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCAGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCt                                               <  1:2402152/140‑1 (MQ=255)
                                                                                     tGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGTCTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTa                                              <  2:2504989/140‑1 (MQ=255)
                                                                                     tGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTTTTCCGGCGTTTTTCCCGGCCCGCACAGCGTGGTAATTATATCCGACCAAAATTGCTTCCGCCGGCTCCCTTACTAGCAGTTTCAGAGCTa                                              >  2:1843039/1‑140 (MQ=255)
                                                                                     tGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAAATATCTCCGACCATAAATGCTTCCGCCGGCGCGCTTCCTAGCTGTTTCAgcgcga                                              >  2:1363434/1‑138 (MQ=255)
                                                                                     tGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCAGCCAGCCCAACGGGGTAATTATCTCCGCCCCAAAATGCGTCCGCCGGCGCGCGTCCTAGCTGTTTCAGCGCTa                                              >  2:2633151/1‑140 (MQ=255)
                                                                                     tGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTACCTGCCAGCACATCGTGGTAATTATATCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCAGTTTAAGCGCTa                                              >  2:2710009/1‑140 (MQ=255)
                                                                                     tGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTGTTCCGGCGTTTTTGCCGGCCAGCACATCGGGGTCATTAGCTGCGTCCATAATGGGGGGCGCCGGCGCGCGTCCGGCCGGGTTCAgcgcgg                                              >  1:2019415/1‑138 (MQ=255)
                                                                                       ccAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTaaa                                            <  1:1463155/140‑1 (MQ=255)
                                                                                           tgtTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGca                                        <  1:920944/140‑1 (MQ=255)
                                                                                           tgtTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGca                                        <  2:2701256/140‑1 (MQ=255)
                                                                                           tgtTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGca                                        <  2:120815/140‑1 (MQ=255)
                                                                                           tgtTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGca                                        <  2:1290038/140‑1 (MQ=255)
                                                                                           tgtTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGca                                        <  2:70482/140‑1 (MQ=255)
                                                                                           tgtTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGca                                        <  1:1869113/140‑1 (MQ=255)
                                                                                           tgtTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGca                                        <  2:542439/140‑1 (MQ=255)
                                                                                           tgtTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGca                                        <  1:477428/140‑1 (MQ=255)
                                                                                               tCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTGTTTGTTACGGCGTTTTTACCAGCCACCACATCCTGGTAAATATATCCGACCATAATTGCTTCCCCCGGCTAGCGTCATAGCTGTTTAAGCGCGAAAAGcaccag                                    >  2:936660/1‑137 (MQ=255)
                                                                                                ccGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTGTTTGTCCGGCGTTTTTACCTGCCCGCACATCGTGGTAATTATCTCCCACCAAAATGGCGTCCGCCCGCTCCCGTCCTAGCGGTTTAAGCGCTAAAAGCACAGGc                                   >  2:749654/1‑140 (MQ=255)
                                                                                                 cGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCt                                  <  1:930699/140‑1 (MQ=255)
                                                                                                 cGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCt                                  <  2:275941/140‑1 (MQ=255)
                                                                                                 cGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCt                                  <  2:2470989/140‑1 (MQ=255)
                                                                                                 cGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCt                                  <  1:373727/140‑1 (MQ=255)
                                                                                                 cGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCt                                  <  2:1823938/140‑1 (MQ=255)
                                                                                                       tttAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGAt                            <  2:1551098/140‑1 (MQ=255)
                                                                                                       tttAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGAt                            <  1:2635619/140‑1 (MQ=255)
                                                                                                       tttAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGAt                            <  1:525420/140‑1 (MQ=255)
                                                                                                       tttAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGAt                            <  2:690578/140‑1 (MQ=255)
                                                                                                         tAATCGTCCATGCGACTCCGGCCGTGTTTTTTGCCGCGTTTTTACCAGCCAGCACAACGTGGTAATTATCTCCCAACAAAATTGCTTCCGCCGACACGCGTCCTAGCTGTTTAAGCGCTAAAAGCACAGGCGCGGGactg                          >  2:469042/1‑137 (MQ=255)
                                                                                                               tCCATGCGACTCCGGCCGTTTTTTTTCCGGCGTTTTTCCCTGCCAGCACAACGGGGTAATTATCTCCGACCCTAATGGGGTGCGCCGGCGCGCGTGCTAGCGGTTTCAGCGCAAAAACCACAGGCTCGGGATCAGGCgtt                    >  1:2599446/1‑140 (MQ=255)
                                                                                                                ccATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTg                   <  2:965111/140‑1 (MQ=255)
                                                                                                                  aTGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGcc                 <  1:2254376/140‑1 (MQ=255)
                                                                                                                        cTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGCCATCGTc           <  2:602790/140‑1 (MQ=255)
                                                                                                                         tCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGCCATCGTca          <  1:2475454/140‑1 (MQ=255)
                                                                                                                          ccGGCCGTTTTTGTTCCGGCGTTTGTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGCCATCGTcac         <  2:2377543/140‑1 (MQ=255)
                                                                                                                           cGGCAGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGCCATCGTcaca        <  2:2019415/140‑1 (MQ=255)
                                                                                                                             gCCGTTTTTGTTCCGGCGGTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGCCATCGTCAcatc      >  2:1987967/1‑140 (MQ=255)
                                                                                                                                 tttttGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTCTCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAACAGCACAGGCTCGGGATCAGGCTTTGCCATCGTCACCtcatca  <  2:843143/140‑1 (MQ=255)
                                                                                                                                 tttttGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGCCATCGTCACAtcatca  <  1:509464/140‑1 (MQ=255)
                                                                                                                                 tttttGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGCCATCGTCACAtcatca  <  1:1158709/140‑1 (MQ=255)
                                                                                                                                 tttttGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGCCATCGTCACAtcatca  <  1:78394/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                   
GATCTGTTTTTCTCACAGATTACTTCACTCCAACGATTTGTAATAGATCACTCATTTTCTCAAGCATATAATCAGGCTCATGCTTTGCCAGTGTTTCCGGCCCTTTAATCGTCCATGCGACTCCGGCCGTTTTTGTTCCGGCGTTTTTCCCTGCCAGCACATCGTGGTAATTATCTCCGACCATAATGGCTTCCGCCGGCTCGCTTCCTAGCTGTTTCAGCGCTAAAAGCACAGGCTCGGGATCAGGCTTTGCCATCGTCACATCATCA  >  NZ_CP034943/3394230‑3394498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑