| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 2924433 | 541 (1.170) | 3 (0.010) | 3/246 | NT | 0.56% | coding (593/1107 nt) | tbcS | tetraprenyl‑beta‑curcumene synthase |
| ? | NZ_CP034943 | 2924437 = | 536 (1.190) | coding (589/1107 nt) | tbcS | tetraprenyl‑beta‑curcumene synthase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGACCTTGTATGTAAGGAAAATAACTATTGCGGATTTTTTTAGCGGTGTTTTCTGTGAAATCAGGCTGGAACGAATACGCAACAAGACAGAATATGCCTAACGTAGAGCCTGCACAGGCTGAAAATTCATACCATTCCATCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/2924292‑2924433‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAGTG > NZ_CP034943/2924437‑2924575 AGACCTTGTATGTAAGGAAAATAACTATTGCGGATTTTTTTAGCGGTGTTTTCTGTGAAATCAGGCTGGAACGAATACGCAACAAGACAGAATATGCCTAACGTAGAGCCTGCACAGGCTGAAAATTCATACCATTCCAT > 1:1550675/1‑140AGACCTTGTATGTAAGGAAAATAACTATTGCGGATTTTTTTAGCGGTGTTTTCTGTGAAATCAGGCTGGAACGAATACGCAACAAGACAGAATATGCCTAACGTAGAGCCTGCACAGGCTGAAAATTCATACCATTCCAT > 1:3616383/1‑140AGACCTTGTATGTAAGGAAAATAACTATTGCGGATTTTTTTAGCGGTGTTTTCTGTGAAATCAGGCTGGAACGAATACGCAACAAGACAGAATATGCCTAACGTAGAGCCTGCACAGGCTGAAAATTCATACCATTCCAT < 1:5975947/140‑1 GTGCTTTCTGTGAAATCAGGCTGGAACGAATACGCAACCAGACAGAAAATGCCTAACGTTGAGCCTGCACAGGCTGAAAATTCATACCATTCCATCTCAGGCAGCTCTGATTCATATTGAGTAAACCACTTTTCAAGCCG < 2:4906929/140‑1 CACAGGCTGAAAATTCATACCATTCCATCTCAGGCAGCTCTGATTCATATTGAGTAAACCACTTTTCAAGCCGCGGAACACGCTCATGCTCAATAACGTGCTTATGCACCTGCAAATCGCAATAATAGCCG < 1:2005836/131‑1 CACAGGCTGAAAATTCATACCATTCCATCTCAGGCAGCTCTGATTCATATTGAGTAAACCACTTTTCAAGCCGCGGAACACGCTCATGCTCAATAACGTGCTTATGCACCTGCAAATCGCAATAATAGCCG > 2:2005836/1‑131 gTCTCAGGCACCTCTGATTCATACTGAGGAAACCCCTTCTCACGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTA < 2:7210816/139‑1 TCTCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCACTAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAG > 2:5452888/1‑140 TCTCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAG > 2:825975/1‑140 TCTCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAG > 2:7011534/1‑140 TCTCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAG > 1:6556/1‑140 TCTCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAG > 1:6262395/1‑140 TCTCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCA < 2:2709024/106‑1 TCTCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCA < 2:3388942/106‑1 TCTCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCA > 1:3388942/1‑106 TCTCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCA > 1:2709024/1‑106 TCTCAGGCAGCTCTGATTAATACTGAGTAAACCACTTCTCAAGCAGCGGGACACGCTCATCCTCAATGACGTCCTTATGTACCTGCAAAGAGCAATACGAGCCGCACAGTTCAAGCAGATAAGGTTTGATCCTTTCGTAG > 2:7284000/1‑140 TCAGGCAGCTCTGATTCATACTTAGTAAACAACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGTCGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATGATGTCGTAGTG < 2:5134910/140‑1 TCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAGTG < 2:4252527/140‑1 TCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAGTG < 2:461486/140‑1 TCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAGTG < 2:461560/140‑1 TCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAGTG > 1:5788271/1‑140 TCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAGTG < 1:5522283/140‑1 TCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAGTG < 2:5644062/140‑1 TCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAGTG < 1:520500/140‑1 AGACCTTGTATGTAAGGAAAATAACTATTGCGGATTTTTTTAGCGGTGTTTTCTGTGAAATCAGGCTGGAACGAATACGCAACAAGACAGAATATGCCTAACGTAGAGCCTGCACAGGCTGAAAATTCATACCATTCCATCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/2924292‑2924433‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctCAGGCAGCTCTGATTCATACTGAGTAAACCACTTCTCAAGCCGCGGGACACGCTCATGCTCAATGACGTGCTTATGTACCTGCAAATCGCAATAATAGCCGCACAGTTCAAGCAGATAAGGTTTGATCATGTCGTAGTG > NZ_CP034943/2924437‑2924575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |