BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 35030	NA (NA)	3 (0.010) +TTACTT	3/240	NT	0.49%	intergenic (+1/‑177)	rrf/csfB	5S ribosomal RNA/anti‑sigma‑G factor
*	?	NZ_CP034943	629576 =	637 (1.380)	3 (0.010) +TTACTT	3/240	NT	0.49%	intergenic (+16/‑7)	rrf/EO946_RS03295	5S ribosomal RNA/tRNA‑Met
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1105 total aligned reads displayed.

CTTCATCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAGTGTATACAATATCC  >  NZ_CP034943/34894‑35169

 ttCATCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGt                                                                                                                                         <  1:6039955/140‑1 (MQ=31)

  tCATCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTa                                                                                                                                        <  1:1783128/140‑1 (MQ=32)

  tCATCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTa                                                                                                                                        >  1:4035802/1‑140 (MQ=32)

  tCATCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTa                                                                                                                                        <  1:1982237/140‑1 (MQ=32)

  tCATCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTa                                                                                                                                        <  1:2151620/140‑1 (MQ=32)

  tCATCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTa                                                                                                                                        >  2:5276311/1‑140 (MQ=32)

  tCATCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTa                                                                                                                                        <  2:2772326/140‑1 (MQ=32)

  tCATACTGAAGGCATTTGTTTTTTTGATATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTa                                                                                                                                        >  2:4622955/1‑140 (MQ=11)

     tCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTaaaa                                                                                                                                     >  2:7667370/1‑140 (MQ=33)

     tCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTaaaa                                                                                                                                     >  1:6376730/1‑140 (MQ=33)

         gAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCa                                                                                                                                 <  2:2158197/140‑1 (MQ=34)

          aaGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAg                                                                                                                                >  1:1278742/1‑140 (MQ=34)

          aaGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAg                                                                                                                                >  2:2328857/1‑140 (MQ=34)

              cATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCa                                                                                                                            >  2:1182263/1‑140 (MQ=34)

               aTTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCAt                                                                                                                           >  1:3309307/1‑140 (MQ=34)

                tttgtttgGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCAtt                                                                                                                          <  1:7636196/140‑1 (MQ=34)

                       ggtggCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTgg                                                                                                                   >  1:6716718/1‑140 (MQ=34)

                               tAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTg                                                                                                           <  1:5071411/140‑1 (MQ=34)

                                     agagGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTttatt                                                                                                     <  1:6605554/140‑1 (MQ=37)

                                      gagGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTttatta                                                                                                    <  2:1025052/140‑1 (MQ=38)

                                         gTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAgg                                                                                                 >  1:6852950/1‑140 (MQ=40)

                                         gTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAgg                                                                                                 >  2:4224448/1‑140 (MQ=40)

                                         gTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAgg                                                                                                 >  2:7320961/1‑140 (MQ=40)

                                            acacCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCa                                                                                              >  2:6853068/1‑140 (MQ=255)

                                                   ttCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAAt                                                                                       >  1:2545953/1‑140 (MQ=255)

                                                   ttCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAAt                                                                                       >  2:6397279/1‑140 (MQ=255)

                                                   ttCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAAt                                                                                       >  2:862147/1‑140 (MQ=255)

                                                   ttCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCGGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAAt                                                                                       >  2:662985/1‑140 (MQ=255)

                                                   ttCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCGGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCGCAGTGCGCTGGGTTTTTTGTTTATTCCGGTCAGTataag                                                                                       >  1:1063845/1‑139 (MQ=11)

                                                       cATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATcaaa                                                                                   <  1:2949743/140‑1 (MQ=255)

                                                        aTGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATcaaac                                                                                  >  1:140409/1‑140 (MQ=255)

                                                         tGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATcaaaca                                                                                 <  2:67244/140‑1 (MQ=255)

                                                          gCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATcaaacaa                                                                                >  2:177213/1‑140 (MQ=255)

                                                              aaCACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATAc                                                                            >  1:377891/1‑140 (MQ=255)

                                                              aaCACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCGGTGCGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCGCATTGAGCTGGGTTTTTTGTTTATTATGGTCGTTAAAAGCAATCAAATAc                                                                            >  1:7462938/1‑140 (MQ=17)

                                                                 acGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAAAAAATACaaa                                                                         <  1:1003792/140‑1 (MQ=255)

                                                                      aggtAAGCACTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCACGGCAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTCAGGTCATTAAAATCACACAAATACAAACAccc                                                                    <  2:1836403/137‑2 (MQ=18)

                                                                      aGTTAAGCTCTTCAGCGCCGATGGTAGTCGTGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCg                                                                    <  2:6218807/140‑1 (MQ=255)

                                                                      aGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCg                                                                    <  1:4482359/140‑1 (MQ=255)

                                                                      aGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCg                                                                    <  2:3872931/140‑1 (MQ=255)

                                                                      aGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCg                                                                    <  2:5075468/140‑1 (MQ=255)

                                                                      aGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCg                                                                    <  1:1859822/140‑1 (MQ=255)

                                                                        ttAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGAc                                                                  <  2:3529062/140‑1 (MQ=255)

                                                                        ttAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGAc                                                                  <  1:3499739/140‑1 (MQ=255)

                                                                        ttAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGAc                                                                  <  2:3039885/140‑1 (MQ=255)

                                                                        ttAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGAc                                                                  <  1:2372459/140‑1 (MQ=255)

                                                                        ttAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGAc                                                                  <  2:4035802/140‑1 (MQ=255)

                                                                        ttAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGAc                                                                  <  1:462001/140‑1 (MQ=255)

                                                                        ttAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGAc                                                                  <  1:6180186/140‑1 (MQ=255)

                                                                        ttAAGCTCTTCAGCGCCGATGGTAGTCGGGGGGTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGAc                                                                  <  2:7546448/140‑1 (MQ=255)

                                                                          aaGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAg                                                                <  1:3182122/140‑1 (MQ=255)

                                                                           aGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCATCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACACATACAAACACCGACAGc                                                               <  2:6096081/140‑1 (MQ=255)

                                                                           aGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGc                                                               <  2:37302/140‑1 (MQ=255)

                                                                               ctTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtat                                                           <  2:2500735/140‑1 (MQ=255)

                                                                                 tCAGCGGCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCGGCCAAGCAATGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:5529572/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:3341204/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:3161325/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  1:2313304/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:6285673/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:4727541/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:2946058/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  1:4775478/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:2637395/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  1:2681929/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:1980942/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:1516498/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:1278742/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  1:5186079/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  1:828195/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  1:5284375/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  1:4231105/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  1:5432486/140‑1 (MQ=255)

                                                                                 tCAGCGCCGATGGTAGTCGGGGGGTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTtatat                                                         <  2:5376886/140‑1 (MQ=255)

                                                                                    gcgcCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGt                                                      <  1:6281963/140‑1 (MQ=255)

                                                                                       ccGAGGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCa                                                   >  1:1549307/1‑140 (MQ=255)

                                                                                          agggTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCatat                                                >  1:7358/3‑140 (MQ=255)

                                                                                          aTGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCg                                                                    <  2:5947277/120‑1 (MQ=255)

                                                                                           tGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCAtata                                               <  1:4377961/140‑1 (MQ=255)

                                                                                                     gggTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTAGTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCaa                                     >  1:1181238/1‑140 (MQ=255)

                                                                                                             cccTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACCCCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCaaa                             <  1:5576489/140‑1 (MQ=255)

                                                                                                             cccTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCaaa                             <  1:2817285/140‑1 (MQ=255)

                                                                                                                  tgAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGAt                        <  1:3610366/140‑1 (MQ=255)

                                                                                                                       gTAGGACGCCGCCCAGCAAGGTACAACCCAGCTCATTGAGGTGGTTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACAACTACCGCTTATATACTCCATAGACGGATTTCAAGTTTCAAAAAGATCTaac                   <  2:444835/140‑2 (MQ=255)

                                                                                                                        tAGGACGCCTCCAATCAAGCTAAAACCCAGCTAATTGAGCTGTGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGATTATATACTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAAt                  <  1:6494769/140‑1 (MQ=255)

                                                                                                                        tAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAAt                  <  1:3030958/140‑1 (MQ=255)

                                                                                                                        tAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAAt                  <  1:7003581/140‑1 (MQ=255)

                                                                                                                        tAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAAt                  <  1:5722410/140‑1 (MQ=255)

                                                                                                                        tAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAAt                  <  1:902092/140‑1 (MQ=255)

                                                                                                                         aGGACGCCGCCAAGCAATGTAAAACCCAGCTCATTGAGCTGAGTTTTTTGTTTATGAAGGTCATGAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATa                 <  1:5910930/140‑1 (MQ=255)

                                                                                                                         aGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATa                 <  1:4897235/140‑1 (MQ=255)

                                                                                                                          ggACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAg                >  1:3924371/1‑140 (MQ=255)

                                                                                                                           gACGCCGCCAAGCAATGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAgt               <  2:7091401/140‑1 (MQ=255)

                                                                                                                           gACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAgt               >  1:7198240/1‑140 (MQ=255)

                                                                                                                                cgccAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCaaa                             <  2:7485168/121‑1 (MQ=255)

                                                                                                                                cgccAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAGTGtata          >  2:4904776/1‑140 (MQ=255)

                                                                                                                                cgccAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAGTGtata          >  1:7071862/1‑140 (MQ=255)

                                                                                                                                  ccAAGCAAGGTACAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGCTCATTAAAATCAAACAAATACAAACACCGACAGCTGATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAGTGTATACa        <  2:653532/140‑1 (MQ=255)

                                                                                                                                      gcaagGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAGTGTATACAatat    >  2:5658042/1‑140 (MQ=255)

                                                                                                                                       caagGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAGTGTATACAATATc   <  2:5814394/140‑1 (MQ=255)

                                                                                                                                       caagGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGCTCATTAAAATCAAACAAATACAAACCCCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAGTGTATACAATATc   <  1:1661046/140‑1 (MQ=255)

CTTCATCCTGAAGGCATTTGTTTGGTGGCGATAGCGAAGAGGTCACACCCGTTCCCATGCCGAACACGGAAGTTAAGCTCTTCAGCGCCGATGGTAGTCGGGGGTTTCCCCCTGTGAGAGTAGGACGCCGCCAAGCAAGGTAAAACCCAGCTCATTGAGCTGGGTTTTTTGTTTATTAAGGTCATTAAAATCAAACAAATACAAACACCGACAGCTTATATAGTCCATATACTGATTTCAAGTTTCAAAAAGATCTAAATAGTGTATACAATATCC  >  NZ_CP034943/34894‑35169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.