New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 607566 =284 (0.610)148 (0.320) 35/248 NT 25.0% coding (409/1125 nt) EO946_RS03185 collagen‑like protein
?NZ_CP034943 = 607835 609 (1.340)coding (678/1125 nt) EO946_RS03185 collagen‑like protein

Only 100 of 500 total aligned reads displayed.

GCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGC  >  NZ_CP034943/607428‑607702
                                                                                                                                          |                                                                                                                                        
gaagccggaccagccggagcgacaggagctaccggggacgccggaccaaccggagcgacgggagccacaggggctactggggacggcggaccagccggagcgacaggagctaccgtggaagccggaccaaccggagcgAc                                                                                                                                         <  2:2401322‑M1/2‑1 (MQ=255)
gaagccggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggcgacgtcggaccagccggatcgacatcaggtaccgggtaagacgtacgaacgggaccgag                                                                                                                                         <  2:5093381‑M1/2‑2 (MQ=255)
 cgccaggatcTGGCGGGGAACCAGGACCCCCCGGAGCGCCAGGAGCGACAGGAGCGACAGGAGCTCCCGGGGACGCTGGACCAGCGGGAGCGAGGGGAGCGACAGGAGCTACCGGGGATGCCGGAGCAGCCGGGGCCACg                                                                                                                                        <  2:4363028/137‑1 (MQ=17)
  gacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACgg                                                                                                                                       <  1:7310622/140‑1 (MQ=255)
  gacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCCACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACgg                                                                                                                                       <  1:5240906/140‑1 (MQ=255)
  agccggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACgg                                                                                                                                       <  2:5917951‑M1/4‑1 (MQ=255)
  agccggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggcgctactggggacgtcggaccagccggagcgacaggagctaccggcgaagccggaccaaccggagcgCCgg                                                                                                                                       <  2:794818‑M1/4‑1 (MQ=255)
   gccggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACggg                                                                                                                                      <  1:7549598‑M1/5‑1 (MQ=255)
   acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                      <  1:930598/140‑1 (MQ=255)
   acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                      <  1:1256061/140‑1 (MQ=255)
    caggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGa                                                                                                                                     <  1:6540573/140‑1 (MQ=255)
     cggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccccaggggctactggggacgtcggaccagcgggagcgacaggagctaccggggaagccggaccacccggagcgACGGGAg                                                                                                                                    <  1:2913108‑M1/7‑1 (MQ=255)
     cggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacagggggtactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAg                                                                                                                                    <  2:7469269‑M1/7‑1 (MQ=255)
     cggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAg                                                                                                                                    <  1:1701877‑M1/7‑1 (MQ=255)
        agcTACCGGGGAAGCCGGACCAGCCGGAGCGACGGGAGCCACAGGCGCGACGGGAGCGCGCGGGGCAGCGGGACCCCCAGGAGCTACGGGCGAGTCCGGACCAACCGGCGACGCGGGACCCCCCGGGGCCCCgggggacg                                                                                                                                 >  1:4650641/1‑135 (MQ=2)
         ccagccggagcgacaggcgcgaccggggacgccggaccacccggagcgacgggagccccaggggctactggggacgtcggaccagccggagggacaggcgctaccgtggaagccggaccaaccggagcgACGGGAGCcac                                                                                                                                >  1:4225629‑M1/130‑140 (MQ=255)
         ccagccggagcgacaggagctaccggggaagccggaccccccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCcac                                                                                                                                >  1:1538868‑M1/130‑140 (MQ=255)
         ccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCcac                                                                                                                                >  1:4882269‑M1/130‑140 (MQ=255)
         ccagccggagccacagtagcgaccggggaagccggagcatccggagcgacgggagccacaggggctactggggaagtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCcac                                                                                                                                >  2:3908815‑M1/130‑140 (MQ=255)
          ctcccGGCGAAGCCGCACCAGCCGGAGCCACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                                               <  1:5950477/137‑1 (MQ=255)
          cgcccGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                                               <  1:747654/137‑1 (MQ=255)
          ccaCCGGGGAAGCCGGCCCCCCCGGCGCCACCGGAGCGACCGGCGCGACAGGCGCTACCGGCGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                                               <  2:1458713/138‑1 (MQ=17)
            gccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctacgggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAgg                                                                                                                             >  1:3967996‑M1/127‑140 (MQ=255)
            gcccgagcgacaggagctcccggggcagccggaccacccggagccacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAgg                                                                                                                             >  1:6234451‑M1/127‑140 (MQ=255)
            aCCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCgg                                                                                                                             >  1:2301723/1‑140 (MQ=255)
            aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                      >  2:2114886/1‑131 (MQ=255)
            aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                      <  1:2114886/131‑1 (MQ=255)
              cggcgcgaccggagcgaccggggaacccggaccaaccggagcgacgggcgccacaggggctcctggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAgggg                                                                                                                           >  1:6109450‑M1/125‑140 (MQ=255)
                 ggACGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                                                                                                                        <  1:3161113/140‑1 (MQ=255)
                 agcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAGGGGCTa                                                                                                                        <  2:6131687‑M1/19‑1 (MQ=255)
                  gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACCGGAGCTCCCGGGGACGCCGGACCACCCGGCGCCACCGGAGCCCCAGGCGCGAc                                                                                                                       >  2:3983587/1‑140 (MQ=18)
                  gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCACCCGGAGAAGCAGGACCAACAGGAGCTACCGGAGAGTCCGGAGCTACCGGAGAGGCCGGAGCAACCGGGGCAACGGGAGCAACCGGGTCTAc                                                                                                                       >  1:4558941/1‑140 (MQ=12)
                     gCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACCGGAGCTACCGGACACGCCGGACCAGCCGGGGCCACCGTAGCCCCCGGGGCTACggg                                                                                                                    >  1:6723058/1‑140 (MQ=18)
                      caggcgcgaccggggaagccggcccaaccggagcgacgggagccacaggggcgactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAGGGGCTACTggg                                                                                                                   >  1:1453721‑M1/117‑140 (MQ=255)
                      caggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAGGGGCTAGTggg                                                                                                                   <  1:799890‑M1/24‑1 (MQ=255)
                      caggagctaccggggaagccggacaaaccgtagcgacgggagccaccggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAGGGGCTACTggg                                                                                                                   >  1:4325488‑M1/117‑140 (MQ=255)
                       cGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACCGGAGCTACCGGGGCAGGTGGACCACGGGGAGCGACGGGAGCGAAAGGAGCTACGGGGGCAGGCGGAGCGGCGGGGGCGACGGGAGCCACGGGGGGGGCTgggg                                                                                                                  >  2:3378473/1‑140 (MQ=12)
                          aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                                                                                                               >  1:7074538/1‑140 (MQ=255)
                              accggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggacgccggaccaaccggagcgACGGGAGCCACAGGGGCTAcgggggacgtcgg                                                                                                           <  1:1921009‑M1/32‑7 (MQ=255)
                              accggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAgg                                                                                                                             >  1:6324078‑M1/109‑122 (MQ=255)
                               ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGa                                                                                                          <  2:3493554/140‑1 (MQ=255)
                               ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGa                                                                                                          <  2:6530067/140‑1 (MQ=255)
                                cggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc                                                                                                         <  2:2340691‑M1/34‑1 (MQ=255)
                                 ggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggacgccggaccaaccggagcgACGGGAGCGACAGGGGCTACTGGGGACGTCGGAcc                                                                                                        <  1:5552351‑M1/35‑1 (MQ=255)
                                    gcgacaggagcgacaggagcgccaggaGCTACCGGGGAAGCTGGACCAGCTGGAGCGAACGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCGACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGc                                                                                                     >  1:3086524/1‑140 (MQ=21)
                                    gcgacaggagcgacaggagcgacaggaGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGc                                                                                                     <  2:6874393/140‑1 (MQ=255)
                                    gaagccggaccaaccggagcgacgggagccaccggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAGGCGCAACTGGGGCAGGCggaccggc                                                                                                     <  2:2281937‑M1/38‑4 (MQ=255)
                                    gaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGc                                                                                                     <  1:4994577‑M1/38‑1 (MQ=255)
                                     cgacaggagcgacaggagcgacaggagCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGcc                                                                                                    <  2:1756025/140‑1 (MQ=255)
                                     cgacaggagcgacaggagcgacaggagCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGcc                                                                                                    <  2:4558650/140‑1 (MQ=255)
                                       gccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg                                                                                                  <  2:7181118‑M1/41‑1 (MQ=255)
                                         cggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgccaggagcgaccggggaagccggaacaaccggagcgACGGGAGCCACAGGGGCTACTGGGGAAGTCTGACCAGCCGGAg                                                                                                <  2:5423859‑M1/43‑1 (MQ=255)
                                         aggagcgacaggagcgacaggagcTCCCGGGGAAGCCGGACCACCTGGAGCGACGGGAGCGACTGGAGCTACCGGGGAAGCCGGACCCGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAg                                                                                                <  2:3038926/140‑1 (MQ=21)
                                         aggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAg                                                                                                >  2:3747018/1‑140 (MQ=255)
                                              cgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCGACCGGGGCAGCGGGCCCAGCCGGAGCTACCGGAGCGACa                                                                                           >  2:1972886/1‑140 (MQ=11)
                                                acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGGCGGACCAGCCGGGGCGACCGGAGCGCCCGGGGCTACAGGGCACGCCGGACCAGCCGGAGCGACAgg                                                                                         >  1:7194571/1‑140 (MQ=18)
                                                acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                         >  1:6632955/1‑140 (MQ=255)
                                                  aggagcgacaggagcTACCGGGGAAGCGGGACCAGCTGGAGCGACGGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGACACAGGGGCTACGGGGGAAGCCGGACCAGCCGGCGCGACCGGAg                                                                                       >  1:2181924/1‑140 (MQ=21)
                                                     agcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                    >  1:1024281/1‑140 (MQ=255)
                                                         acaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGTGCCACGGGAGCCACAGGGGCGACTGGGGAAGCCGGACCAGCCGGAGCGACAGGACCtcgcgg                                                                                >  1:4746248/1‑135 (MQ=21)
                                                           gggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCcaca                                                                                                                               >  1:6954370‑M1/80‑91 (MQ=255)
                                                                ccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCcac                                                                                                                                >  1:376634‑M1/75‑85 (MQ=255)
                                                                ccacaggggctactggggacgccggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCcac                                                                                                                                >  1:5659805‑M1/75‑85 (MQ=255)
                                                                  aCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg                                                                       >  2:4921958/1‑140 (MQ=255)
                                                                    cGGCGAAGCCGCACCCGCTGGAGCGCCGGGAGCGACAGGAGCTCCCGGTGAAGCCGGACCACCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                     <  2:1831552/140‑1 (MQ=17)
                                                                        gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGACGCCGGACCAGCCGGCGCGACAGGAGCTACCGGGGCAGCCGGCCCAGc                                                                 >  2:2562298/1‑140 (MQ=18)
                                                                                aCCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGa                                                         >  1:3879340/1‑140 (MQ=255)
                                                                                    gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGACGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                     >  1:2807351/1‑140 (MQ=255)
                                                                                     cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                                    >  2:129522/1‑140 (MQ=255)
                                                                                      cggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCcaca                                                                                                                               <  1:6467376‑M1/12‑1 (MQ=255)
                                                                                      cggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAgggg                                                                                                                           >  1:3415526‑M1/53‑68 (MQ=255)
                                                                                         aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                <  1:1625376/140‑1 (MQ=255)
                                                                                              tgggAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                                                                                                <  1:414919/54‑1 (MQ=11)
                                                                                              ccggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCcac                                                                                                                                >  2:6106285‑M1/45‑55 (MQ=255)
                                                                                              caggagcgacaggagctaccggggaagccggaccaaccggagcgACGGGAGCCACAgggg                                                                                                                           >  2:161025‑M1/45‑60 (MQ=255)
                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGCGGTAGCCGGACCAGCCGGAGCGAAAGGCGCGACCGGGGAAGCCGGACCATCCGGCGCGCCCGGAGCTACCgggg                                          >  2:421318/1‑140 (MQ=17)
                                                                                                  agcgacaggagctaccggggaagccggaccaaccggagcga                                                                                                                                          <  1:1788849‑M1/1‑1 (MQ=255)
                                                                                                  aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGCAGCACCAGGGGAAg                                       >  2:6707452/1‑140 (MQ=14)
                                                                                                             cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGcc                            >  1:2628606/1‑140 (MQ=255)
                                                                                                             cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                            >  1:6878238/1‑140 (MQ=255)
                                                                                                             cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                            <  1:2500553/140‑1 (MQ=255)
                                                                                                               accggggaagccggaccacccggagcgACGGGAGCcac                                                                                                                                >  1:4390465‑M1/28‑38 (MQ=255)
                                                                                                               accggggaagccggaccaaccggagcgACGGGAGCcaca                                                                                                                               <  1:361800‑M1/12‑1 (MQ=255)
                                                                                                               aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGcc                                                 >  2:4686487/1‑116 (MQ=255)
                                                                                                               aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGACGAACCgg                          >  2:5295672/1‑140 (MQ=255)
                                                                                                                 cGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCAACCGGAGCCGCAGGACCAGCCGCAg                        >  2:2729944/1‑140 (MQ=14)
                                                                                                                   gggAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGGAGCCGGACCAACCGGAGCg                      >  1:3476647/1‑140 (MQ=255)
                                                                                                                     gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACCGGAGCAACCGGGGAAGCCGGTGCCACCGGAGCGAc                    >  2:5550082/1‑140 (MQ=17)
                                                                                                                     gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCCTCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCGCCGCAGCGACAGGAGCGACGGGGGACGCCGGACCAACCGGAGCgcc                    >  2:2875991/1‑138 (MQ=18)
                                                                                                                     gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGAc                    >  1:5380506/1‑140 (MQ=255)
                                                                                                                        gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAg                                                            <  2:5645195/97‑1 (MQ=255)
                                                                                                                        gCCGGACCACCCGGGGCCACGGGAGCCACAGGGGCTACTGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCAGGAGCGACAGGAGATACCGGGGCAGCAGCACCAAGACGAGCCACAgt                 >  1:994662/1‑139 (MQ=17)
                                                                                                                        gCCGCACCAGCCGGGGCCACGCGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                 <  1:2400681/140‑1 (MQ=255)
                                                                                                                          cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg               <  2:6381808/140‑1 (MQ=255)
                                                                                                                          cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGCAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg               <  2:7074538/140‑1 (MQ=255)
                                                                                                                             aCCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGCGAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCGGCATGACCACCCGGACCGACCGCAGcga            >  2:6921998/1‑138 (MQ=17)
                                                                                                                                  ccggcgcgACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg       >  1:1999046‑M1/9‑140 (MQ=255)
                                                                                                                                  ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg       >  1:1748550/1‑140 (MQ=255)
                                                                                                                                  ccGGCGCCCCCGGAGCCACAGCCGCTACGGGGGAAGCCGGAGCTGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg       <  1:1174681/140‑1 (MQ=11)
                                                                                                                                      ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg   <  1:6370668/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                        
GCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGC  >  NZ_CP034943/607428‑607702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.