| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 17,872 | A→C | 13.5% | K243N (AAA→AAC) | dacA → | D‑alanyl‑D‑alanine carboxypeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 17,872 | 0 | A | C | 13.5% | 864.8 / 8.4 | 361 | K243N (AAA→AAC) | dacA | D‑alanyl‑D‑alanine carboxypeptidase |
| Reads supporting (aligned to +/- strand): ref base A (215/54); new base C (2/57); total (218/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.86e-30 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 388 total aligned reads displayed.
CTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACGCAAAAGGC > NZ_CP034943/17733‑18010 | cTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAAATTTATGCTGaaa < 1:1732668/140‑1 (MQ=255) ggACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGc < 2:228496/140‑1 (MQ=255) ggACAGGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGc < 2:4167870/140‑1 (MQ=255) aTGGCAATTCTTGCGGATCACTTGCTTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATGGCGATAACGAAGTTCAGAGAAGGCAGAGCTGATGACATGGAGCTGCCGAACTGGAACTTTATGGTGCACGGGCgtgt > 2:6429599/1‑140 (MQ=255) ggCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGATACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGCCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCa > 1:1243425/1‑140 (MQ=255) ggCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCa > 2:5975136/1‑140 (MQ=255) ggCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCa > 1:3552188/1‑140 (MQ=255) gCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAg < 1:6064805/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTCCCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 2:5466409/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 1:2311673/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 2:5832769/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 2:5114766/140‑1 (MQ=255) cAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc < 1:7375220/140‑1 (MQ=255) ttCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAg > 1:6930577/1‑140 (MQ=255) ttCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAg > 1:1509271/1‑140 (MQ=255) ttCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAg > 1:769544/1‑140 (MQ=255) ttCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAg > 1:3487010/1‑140 (MQ=255) gCGGATCACTTGATTACTGACTACCCTTAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATaa > 2:4625095/1‑140 (MQ=255) gCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATaa > 1:4073835/1‑140 (MQ=255) aTCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATaaaaaa > 2:7352148/1‑140 (MQ=255) tACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAg > 1:7535646/1‑140 (MQ=255) tACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAg > 1:7180191/1‑140 (MQ=255) tACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTAGAAAAAAGCGACTGTAg > 2:2156311/1‑140 (MQ=255) tACTGACTACCCTGAGATTCTGGAGACTTCCAGAATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGAGATGCCGAACTGGAACTTTATGCTGAAAGGGCGTGTCAGCGAGTATAAAAAAGCGCCTGTAg > 1:2733672/1‑140 (MQ=255) actcactcCCCTTATATTCTGTAGACTTCATTTATCGTTAAAACGAAGTTCCTACAAGGAAAATTTTATTAAATGTCCTTGCAGAAGGGGAACTTTTTGCTGAACGGGTTTGTCAGCTATTATAAAAAAGCGACTGTAGa < 2:3772719/140‑1 (MQ=255) aCTGACTACACTTATTTTGTGGACATTTCCTTTATCGCAAACACGATGTTCATAGAAGGCACCGATTTTTAATTGGACTTCCCGACCTGCACGTTTATGCTCACCGGGCTTGTCAGCGATTATAAAAAAGCGACTGTAGa < 2:4907578/140‑1 (MQ=255) aCTCACTACCCTGATATGCGGCACACTTCCTGTATCTCTAAAACTAATTTCAGACAAGCCACAGATTATGAAATGGACATGCCTACGTTGAACTTTTCGCTGAACGGGCTTTTATGCGATTATAAAAAAGCGACTGTAGa < 2:2854352/140‑1 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc > 2:7057317/1‑113 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGa > 2:6249349/1‑140 (MQ=255) aCTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGa > 1:5938260/1‑140 (MQ=255) cccTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGa > 1:2934064/1‑140 (MQ=255) tGAGATGCTGGTGACTTCCAGTATCGCGAAAACGAAGTTCAGAGAAGGCCCAGATGATGCAATGGACATGCCGACCGGGAACTTTATGCTGAAAGGGCTTGGCAGCGAGGATACAAAAGCGACTGTAGACGGCTTGaaaa > 1:7042862/1‑140 (MQ=255) gttagtCTGGACACTTCAAGTAGCGCTAAACCGATGTTCAGAGAAGCCAAAGATTAGTAACTGGAAATGCCGAAATGCAACTTTATGCTCAAAGGGCTTGTCAGCGCGTTTAAAAAAGCGACTGTAGACGGATTGACAAc < 2:7207724/135‑1 (MQ=255) agaTACTTGAGACTTACAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATAGAAATGACGAACTGGAACTTTATGATGAAATGTCTTGTCAGCGAGTATAAAAAAGAGAATGTAGACGTATTGAAAACa > 2:6840195/1‑140 (MQ=255) ctccgggAGACTTCCAGTATCGCCAAACGCAAATTCCCCCATGGCACCGATGATGAAAGGGACAGCCCGAACTGGATTTTTAGGCTGACGGGGCGTGTCAGCGATTATAAAAAAGCGACTGTAGACGGACTGAAAACAgg < 2:6044516/135‑1 (MQ=255) aTTCTGTATACTTCAATTATCGATAAACCTAAGTTCAGAGACGGAACATATTATTAAATGGACATGCCTAACTGCAAGTTTTTGCTGAACGGGGTTGTCAGCTATTATAAAAAAGCGACTGTAGACGGATTGAAAACAgg < 2:3552188/140‑1 (MQ=255) ttCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGt > 1:4603452/1‑140 (MQ=255) tGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGc > 1:2449194/1‑98 (MQ=255) tGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCt > 2:6776164/1‑140 (MQ=255) gtagaCTTCAATTTTCGATAAAACGATTTTCACATAAGGAACATATTATGAAATGGAATTGCCGAACTGGAATTTTATGCTGAACGGGCTTGTCAGCGATTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTa < 2:3307138/138‑1 (MQ=255) gagaCTTCCAGTATCGCCAAAACGAAATTCAGAGAAGGCACCGATGATGAAATGGACATGCCGTACTGGAATTTTATGCTGAAGGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGACTGACAACCGGTTCTAc > 1:5396480/1‑140 (MQ=255) aCTTCCAGTATCGCTAAACCTACTTTCAGAGAAGCCACATATGAGCAAATGGACATCCCCAACTGGAACTTTTTGCGCATGGGGTTTGTCAGCTAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGa < 2:2981485/140‑1 (MQ=255) ttCCTGTAGCGCTAAAACTAAGTACCGAGACGGCACATTTTTTTAAATGGCCATGCCGACGTGCACGTTTATGCGGAACGGGCTGGCCCGCGATTATAAAAACGCGACTGTAGACGGATTGAAAACAGGTTCTACTGAct < 2:4545330/140‑1 (MQ=255) ttCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGAct > 1:4195312/1‑140 (MQ=255) ttCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGAct > 2:7536597/1‑140 (MQ=255) ttCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGAct > 1:1347567/1‑140 (MQ=255) ctttATCGATAAAACGATTTTCACAGAAGGCACATTTTTTTAATTGCACATGCCGAACTGTAAATTTATGCTGAAAGGGCTTGACAGCGATTAAAAAAACGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTg < 2:4988993/137‑1 (MQ=255) cAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTg > 2:1618661/1‑140 (MQ=255) gCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTc > 1:285842/1‑140 (MQ=255) aaacctaGTTCACAGAAGCCACAGATCATGAAATGCACATGCTGAACTGGAATTTTATGCTGAAAGGGCTTGCACGCGATAATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGc < 2:5276970/134‑1 (MQ=255) aaaCTAATTTCAGATAAGGCACATATTATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGc < 2:4073835/140‑1 (MQ=255) aaaCTAAGTTCATCCAAGGCACATATTATCAAAGGGACATGCCGAACTGGAACTTTAGGCTGAACGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGc < 2:6210824/140‑1 (MQ=255) aaaCGAATTTCAGAGACGCCACAGATGATGAAATGGACAGGCCGAACTGCACCTTTATGCTGAACGGGCTTGTCAGCGAGTATAAAAACGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGc < 2:7594033/140‑1 (MQ=255) aaaCGAAGTTAACAGACGGCAAATATGATTAAATGCACATGCCCAACTGTAAATTTATGCTCAACGGGCTTGTCAGCTAGTATAAAAACGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGc < 1:5186359/140‑1 (MQ=255) aaaCCAAGTTACCAGAAGGCACAGATTATGAATGGGAAATGCCCACCTGCAATTTTATGCTGAATGGGGTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGc < 2:139232/140‑1 (MQ=255) gTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAg > 2:1689243/1‑140 (MQ=255) ttCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAgg > 2:6109795/1‑140 (MQ=255) cAGATACGGCACTGATTTTTAATTGTACTTGCCCACCTGGAATTTTATGCTGACCGGGGTTTTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGaa < 2:663886/140‑1 (MQ=255) agaAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAg > 1:5255027/1‑140 (MQ=255) gCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAACGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTAGTGAGTCTGCGGGCTCATGCTTTACAGGAACAGCTGaa > 1:5647950/1‑140 (MQ=255) gCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGCAACAGCTGaa > 2:320329/1‑140 (MQ=255) ttttattaaaTGGACTTCCCTAAGTGCAATTTTAGGCGTACGGGGTTTGTCAGCGCTTAAAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCaa < 1:998035/133‑1 (MQ=255) atgaAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGa > 2:2466735/1‑140 (MQ=255) atgaAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGa > 1:6800290/1‑140 (MQ=255) gaAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAAt > 1:2354377/1‑140 (MQ=255) aattgtaCATGCCTAACTTTAACTTTTTGCTCAACGGGTTTTTCCGCTATTAAAAAAACGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATg < 1:5854045/134‑1 (MQ=255) aattgcaCATGCCCAAGTGCAACTTTATCCTAAAAGGTCTTTGATCCCACTAAAAAAAAGCGACTGTAGACTGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATg < 1:7590055/134‑1 (MQ=255) aatggcaCATGCCGAACTGGAAATTTATGCTCAACGGGTTTGTCTGCGATTAAAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATg < 1:6566209/134‑1 (MQ=255) aactGGACTTCCCTAAGTGGAACTTTATGATGAACGGGGTGGTCCGCGTTTAAAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATg < 1:6320298/137‑1 (MQ=255) agtgtaCATCCCGAAGTGTAAATTTCTCTTGAACGGGGTGGGCAGCTATTATAAAACAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGc < 1:4435520/135‑1 (MQ=255) actGGACATGCCGAACTGGAACTTTATGCTGAACGGGCTTGTCAGCGATTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGc < 2:3404404/138‑1 (MQ=255) aaTGTACTTGCCGAACTGCAACTTATTGATGAATGGGGTTTACAGCTAGTAAACAAACGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGc < 2:1841379/140‑1 (MQ=255) ttGGACAGGCCGACGGGGAACTTTTGGGTCAATGGTGTTGTCACCGAGTTTAACAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg < 2:1148733/139‑1 (MQ=255) aTGGACATGCCGACCTGTAAATTTATGCTGAAAGGGGTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg < 2:445605/140‑1 (MQ=255) aTGGACATGCCGAACTTGAATTTTAGGCTTAATTTGTTTGTAAGCGATTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg < 2:2595195/140‑1 (MQ=255) aTGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg > 2:2750070/1‑140 (MQ=255) aTGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCCAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg > 2:6998461/1‑140 (MQ=255) aTGGAACTGCCGACCGGCAACTTTCTGGTTAAGGGGTTTGTCCGCTTGTATAAAAACGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg < 1:3793764/140‑1 (MQ=255) aTGCACATGCCCAACTGCAAGTTTATGCTCACTGGGCTTGTCCGCGCGTATAAAAACGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCg < 2:2418368/140‑1 (MQ=255) tGGACTTGCCCAAGTGCAATTTTTTGCCCAATGGGCTTGGCCGCTATTATAAAAACGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCgt < 1:4845713/140‑1 (MQ=255) gaactGCCGAACTGTAACTTTATGCTTAACGGGCTTGACAGCGATTAAAAAAACGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCgtgt < 1:7068391/136‑1 (MQ=255) gACATGCCGACCTGGAACTTTATGCTTAACGGGCTTGTCAGCTATTATAAAAAAGCGACTGTAGGCGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCgtgt < 2:769544/140‑1 (MQ=255) gACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCgtgt > 2:7278428/1‑140 (MQ=255) gACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCgtgt > 2:1094586/1‑140 (MQ=255) gACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCgtgt > 2:1924079/1‑140 (MQ=255) gCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGACCACAGGTTCTACTGACTCTGCGGGCTCATGCTGTACAGGACCAGCTGAACTCAACGGAATGCGTGttattc > 1:1028182/1‑139 (MQ=255) gCCCAACTGGAAATTTATGCTGAACGGGCTTGCCCGCGATTAAAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGttatta < 1:1013184/140‑1 (MQ=255) cgtgAACTGTAATTTTTTGCTTAACGGGTTTTTATGGGTTTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTTttatta < 1:1620739/137‑1 (MQ=255) caaCTGGAAATTTATGAGGCCCGGGCTGTTAAGCGAGAAAAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACtg < 1:2174538/139‑1 (MQ=255) aaCTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTAtt > 1:2552614/1‑140 (MQ=255) tATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACg > 1:3178326/1‑140 (MQ=255) aTGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACGc > 1:4318832/1‑140 (MQ=255) cTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACGCaaa > 2:2053197/1‑140 (MQ=255) aaaGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATg > 1:7487934/1‑108 (MQ=255) aaaGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACGCAAAAgg > 1:6425802/1‑140 (MQ=255) aaaGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACGCAAAAgg > 1:6183770/1‑140 (MQ=255) aaaGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACGCAAAAgg > 1:5495256/1‑140 (MQ=255) aaaGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACGCAAAAgg > 2:943766/1‑140 (MQ=255) caGGGGTGGTCCGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACGCAAAAGGc < 1:5099624/139‑1 (MQ=255) aaGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACGCAAAAGGc > 1:674082/1‑140 (MQ=255) | CTAAGGACATGGCAATTCTTGCGGATCACTTGATTACTGACTACCCTGAGATTCTGGAGACTTCCAGTATCGCTAAAACGAAGTTCAGAGAAGGCACAGATGATGAAATGGACATGCCGAACTGGAACTTTATGCTGAAAGGGCTTGTCAGCGAGTATAAAAAAGCGACTGTAGACGGATTGAAAACAGGTTCTACTGACTCTGCGGGCTCATGCTTTACAGGAACAGCTGAACTCAACGGAATGCGTGTTATTACTGTTGTATTAAACGCAAAAGGC > NZ_CP034943/17733‑18010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |