| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,946,821 | T→G | 6.2% | E191A (GAG→GCG) | EO946_RS20310 ← | polysaccharide pyruvyl transferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,946,821 | 0 | T | G | 6.2% | 1603.5 / 15.1 | 602 | E191A (GAG→GCG) | EO946_RS20310 | polysaccharide pyruvyl transferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (250/283); new base G (63/2); total (317/285) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.46e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 618 total aligned reads displayed.
CGTGTCTACCGTATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCGCAGCAATCGTTAAGTTTGGATTTTGATGGTACGC > NZ_CP034943/3946682‑3946960 | cGTGTCTACCGTATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCt > 1:2938982/1‑140 (MQ=255) tgtCTACCGTATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGGTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCg > 2:3607385/1‑140 (MQ=255) tCTACCGTATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCgcg > 1:6432072/1‑138 (MQ=255) tCTACCGTATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCgcg > 1:2680531/1‑138 (MQ=255) tCTACCGTATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAg > 2:5520793/1‑140 (MQ=255) tCTACCGTATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTATCCTTATCCGCTCTTAAAATAAAGAGAACGCAGTCCCGGGCGAg > 1:4204817/1‑140 (MQ=255) tATCCAGCACCGTATCGGTACGCTCTGTGTAAGTTGTTTTTTCTGCCCATTGCTTCATCTGTGAAATAAAATCTTCGTCAGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTcgc > 2:1883237/1‑140 (MQ=255) tATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAATAGAACGCCGTCCCGCTCGAGCTCTcgc > 2:5460289/1‑140 (MQ=255) tATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTcgc > 2:5825575/1‑140 (MQ=255) tATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTcgc > 2:796928/1‑140 (MQ=255) aTCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCGGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTcgcg < 2:2916501/140‑1 (MQ=255) tCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCgg > 2:1926077/1‑140 (MQ=255) tCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCgg > 2:566236/1‑140 (MQ=255) tCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCgg > 2:919949/1‑140 (MQ=255) tCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCgg > 2:2062189/1‑140 (MQ=255) aGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGcac < 2:5592133/140‑1 (MQ=255) aGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGcac > 2:3005901/1‑140 (MQ=255) aGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGcac < 2:1026075/140‑1 (MQ=255) aGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCGCCAGCACgcgccccac > 1:17195/1‑135 (MQ=255) gCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGcaca < 1:702967/140‑1 (MQ=255) gCACCGTATCCGTACGCTACGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTAGCGGcaca < 2:2156166/140‑1 (MQ=255) cGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGc < 1:1215281/124‑1 (MQ=255) cGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAatat > 2:4580588/1‑140 (MQ=255) cGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAatat > 2:6701622/1‑140 (MQ=255) tATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGGGCGAGCTCGCGCGGCACAatatac > 2:702967/1‑138 (MQ=255) tATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTcg < 2:638599/127‑1 (MQ=255) tATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTcg > 1:638599/1‑127 (MQ=255) tATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAAAATca > 1:3082658/1‑139 (MQ=255) tATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCGCGCGCGCGCGCGGCCCAaaatac > 1:5794135/1‑138 (MQ=255) tATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCGCGAGCTCTCGCGGCACCAAATcc > 1:5311326/1‑140 (MQ=255) tCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCTAGCTCTCGCGGCACAATATCCaa < 1:6281629/140‑1 (MQ=255) tCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCaa < 1:6745804/140‑1 (MQ=255) tACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCaaagaa < 2:1243671/140‑1 (MQ=255) aCGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCaaagaaa < 2:5023738/140‑1 (MQ=255) cGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCaa < 2:2267847/134‑1 (MQ=255) cGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCaa > 1:2267847/1‑134 (MQ=255) cGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAAAATCCaaagaaag > 2:337971/1‑140 (MQ=255) cTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAAAATCCAAAGAAAGCa > 2:6862186/1‑140 (MQ=255) ccGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCGCGCGCGCTCGGCGCCCCAAATACAAAAAAAGCAcc > 1:4393776/1‑140 (MQ=255) cGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGACCGCCGTCCCGCTCGCGCGCTCGGGGCACAATATCCAAAGAAAGCAcac > 1:2738402/1‑138 (MQ=255) cGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGGACAAAATCCAAAGAAAGCACCa > 2:5174165/1‑140 (MQ=255) cGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCAcc < 1:3539302/139‑1 (MQ=255) cGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCa > 2:4157805/1‑140 (MQ=255) cGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCa > 2:3845599/1‑140 (MQ=255) gTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCCAAGAAAGCAccct > 2:5924341/1‑138 (MQ=255) tataAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACCAAATCCAAATAAAGCACCaag > 2:1784554/1‑138 (MQ=255) taAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTc < 1:1039279/140‑1 (MQ=255) taAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTc < 1:6176000/140‑1 (MQ=255) aaGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTcc < 1:4753810/140‑1 (MQ=255) aaGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTcc < 2:616383/140‑1 (MQ=255) aGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCg < 1:553790/140‑1 (MQ=255) aGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCg < 2:7148703/140‑1 (MQ=255) ttgttTTTTCTGCCCATTTCCTCATCTGTGGAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGgt > 2:4334591/1‑140 (MQ=255) ttgttTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGgt > 2:1594340/1‑140 (MQ=255) gttTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGATCGCTCGCGGCACAATATCCAAAGAAACCACCATGTCCGgtgt > 2:1334072/1‑140 (MQ=255) gttTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTcg < 1:1829219/104‑1 (MQ=255) gttTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCGCGAGCTCTCGCGGCACAATATCCAAAGAAAACACCAACTCCGgggt > 1:5118699/1‑140 (MQ=255) tttttCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTaa < 1:771139/140‑1 (MQ=255) ttttCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTAGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTATAGAGGCACAATATCCAAACAAAGCACAAAGTCAGGTGTaaa > 2:4044781/1‑140 (MQ=255) tCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGAt < 1:1110872/140‑1 (MQ=255) cccATGTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATcaca < 1:1580717/140‑1 (MQ=255) ccATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACAt < 2:3958531/140‑1 (MQ=255) cATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGGTCGAGCTAACCCGGCACCCTCTACAAAGAAAGCAACAAGTAAGGTGGAAAGATAACATTGGAGTGGa > 1:4536198/1‑140 (MQ=255) cATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGATCTCGCGGCACAAATTCCAAAGAAACCACCATGTCCGGTGTAAAGATCACATTGGAGTTGa > 2:7484301/1‑140 (MQ=255) tCTTTGAAATAAAATCGTCGTCGGTCACTTTCTCCTGAGCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAg < 2:5979748/140‑1 (MQ=255) cTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGCAgg > 2:4623220/1‑140 (MQ=255) tgttatataataTCTTAGTCTGTGACTGTCTACTTATCCGCTCTTAAAATAAATAGTAAGTAGTACCGCTTGAGCGCTCGATGCACACTTTCCAAAGAACTCAGCATGTCGGGTTTAAAGTTCTCTTTGGAGTTGAATGt < 2:2758263/134‑1 (MQ=255) tgtgAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGt < 2:487591/140‑1 (MQ=255) tgAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACAATGGAGTTGAAGGTCt > 2:2512597/1‑140 (MQ=255) tgAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGGAAAGATCACATTGGAGTTGAAGGTCt > 2:6474615/1‑140 (MQ=255) gAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCtt < 1:4974897/140‑1 (MQ=255) aaaTCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTac < 1:1412506/140‑1 (MQ=255) aaaTCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTac < 2:6573586/140‑1 (MQ=255) aaaTCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTac < 1:7174911/140‑1 (MQ=255) aaaTCTTCGTCGGTCAATTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTAGAGCTCTCGCGGCACAAGAACCAAAGAAAGCACCATGTCCGGTGTAACGATCACATTGGAGTTGAAGGTCTTTTTTac < 1:3679260/140‑1 (MQ=255) aaTCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTaca < 1:7607075/140‑1 (MQ=255) aTCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTacaa < 2:729133/140‑1 (MQ=255) aTCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTacaa < 2:1112134/140‑1 (MQ=255) aTCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTacaa < 1:3845599/140‑1 (MQ=255) tCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTacaac > 2:6270774/1‑140 (MQ=255) tCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCACAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTc < 1:6547390/140‑1 (MQ=255) ttATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCAcg < 2:3279261/140‑1 (MQ=255) tATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCGCGAGCTCTCGCGGCACAAAATCCAAACAAAGCACCAAGTCCGGTGTAAAGATCACAATGGAGGTGGAGGTGTTTTTTACAAAATACACCCTCGGTGTCTCAcgc > 1:2467944/1‑140 (MQ=255) tCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGAt < 1:7300671/86‑1 (MQ=255) tCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCGGGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCCGTGTAAAGATCACATTGGAGGTGAAGGTCTTTTTTAAAAAATACAGCGTCTGTGTGTCACgcgc > 1:2375225/1‑140 (MQ=255) cGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCACAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCgcag < 2:2467392/140‑1 (MQ=255) ctctTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCCAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCgcagca > 2:4405778/1‑140 (MQ=255) ctctTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCgcagca > 2:1456916/1‑140 (MQ=255) ctctTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATACAAAGAAAGCACCATGTCCGGTGTAAAGAACACAATGGAGTTGAAGGTCTTTTTTACAAAATACACCGTCTGTGTCTCACCCgcagca > 2:4727900/1‑140 (MQ=255) aaGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCGCAGCAATCGTTAAGtt < 1:2060764/140‑1 (MQ=255) aaCGCCGTCCCGCTCGATCTATCGCGGCACAATATCCTAAGAAAGCACGATGTCAGTTGTAAAGATCACATTTGAGTTGAAGGTATTTTTTACAACATCCAGCGTCTTTGTCTCACGCGAAGCAATCGTTAAGTTTGGAt < 1:1905491/140‑1 (MQ=255) aaCGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATcaca > 2:5305018/1‑70 (MQ=255) agTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCATCGTCTGTGTCTCACGCGCAGCAATCGTTAAGTTTGGATTTTGa < 1:2154837/139‑1 (MQ=255) gTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCGCAGCAATCGTTAAGTTTGGATTTTGAt < 1:4044781/140‑1 (MQ=255) gTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCGCAGCAATCGTTAAGTTTGGATTTTGAt < 1:5668374/140‑1 (MQ=255) gTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCGCAGCAATCGTTAAGTTTGGATTTTGAt < 1:5979366/140‑1 (MQ=255) gTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCGCAGCAATCGTTAAGTTTGGATTTTGAt < 2:1689859/140‑1 (MQ=255) gTCCCGCTCGAGCTCTCGCGGCACAAGATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCGCAGCAATCGTTAAGTTGGGATTTTGAt < 1:54350/140‑1 (MQ=255) cTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATAACATTGGGGTTGACGGTCTTTTTTACAACATCCAGCGGCTGTGTCTCACGCGCCGCACTCGTTAAGTTTGGATTTTGATGGTagg > 1:3336403/1‑138 (MQ=255) cTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACAATGTCCGGTGTAAAGATCACATTGGAGTTGAATCTCTTTTTTAAAACATCCAGAGTCTGTGTCTCACGCGCAGCAATCGTGAAGTTTGGATTTTTTTGGTaag > 1:882166/1‑138 (MQ=255) | CGTGTCTACCGTATCCAGCACCGTATCCGTACGCTCCGTATAAGTTGTTTTTTCTGCCCATTTCCTCATCTGTGAAATAAAATCTTCGTCGGTCACTTTCTCCTTATCCGCTCTTAAAATAAAGAGAACGCCGTCCCGCTCGAGCTCTCGCGGCACAATATCCAAAGAAAGCACCATGTCCGGTGTAAAGATCACATTGGAGTTGAAGGTCTTTTTTACAACATCCAGCGTCTGTGTCTCACGCGCAGCAATCGTTAAGTTTGGATTTTGATGGTACGC > NZ_CP034943/3946682‑3946960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |