| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,976,114 | G→T | 6.7% | A31E (GCA→GAA) | rlmH ← | 23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,976,114 | 0 | G | T | 6.7% | 1452.4 / 26.5 | 562 | A31E (GCA→GAA) | rlmH | 23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH |
| Reads supporting (aligned to +/- strand): ref base G (223/284); new base T (52/3); total (275/287) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.46e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 567 total aligned reads displayed.
CGAGGGCGATGACGTGGGCGTCGGGGCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATATGTTGTCCACAA > NZ_CP034943/3975977‑3976253 | cGAGGGCGATGACGTGGGCGTCGGGGCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCg < 1:3445710/140‑1 (MQ=255) cGATGACGTGGGCGTCGGGGCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGcc > 2:3192431/1‑140 (MQ=255) tGGGCGTCGGGGCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGTTGATGTCGATTTTTGCGTAGGCCGAAAGTCg > 1:5461850/1‑140 (MQ=255) tGGGCGTCGGGGCGGATTTTGGATAGGATGCGGTCGCCTTCGTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTGCCGGCGCTTTTTCGTCCGGGAGTGCGATGATGTCGATTTTTGCGTATGCCGAAAGGCg > 2:1750044/1‑140 (MQ=255) gggCGTCGGGGCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATTATGTCGATTTTTGCGTAGGCCGAAAGTCGt > 2:7278425/1‑140 (MQ=255) gggCGTCGGGGCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGt > 2:2281287/1‑140 (MQ=255) gggCGTCGGGGCTGATTTTGGATAGGATGCGGTCGCCTTCTGTGTCTGTTTTGATTTTCATGTCAGGTTCGCTTAGGGTTTCCGGGTCGTTTTGGTGCGGGAGGGCGATGATGGCGATTTTTGCGTAGGGCGaaatgcgt > 2:6183293/1‑135 (MQ=255) cGGGGCTGATTTTGGATAGGATGCGGTGGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGGTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCgtg > 2:2921318/1‑140 (MQ=255) cGGGGCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCgtg < 2:2352539/140‑1 (MQ=255) gggCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTa < 2:5943893/140‑1 (MQ=255) gggCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTa < 1:6592195/140‑1 (MQ=255) gggCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTa < 1:2772412/140‑1 (MQ=255) gggCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTa < 1:3647331/140‑1 (MQ=255) gggCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTa < 1:7682411/140‑1 (MQ=255) gggCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGAGTTTTGCGTAGGCCCTAAGTCGTTTCGTGTa > 2:5540175/1‑140 (MQ=255) cTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTACGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAAGCCGAAAGTCGTTTCGTGTAttc > 2:355360/1‑140 (MQ=255) gATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCAGGCGCTTTTTCGTCCGGGAGTTCGAAGATGTAGATTTTTTCGTAGGCCGAAATTCGTTTCGGGTAttctt > 2:1951103/1‑140 (MQ=255) tGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATg > 2:1659961/1‑140 (MQ=255) tGGATAGGATGCGGTCGCCTTCTTTGACTTTTATGAATTTCATGTCCTGGACGCTTAGGTTTTCCGGCGCATTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTACaaag > 2:7461598/1‑138 (MQ=255) ggATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTAGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTGGTGTATTCTTCAATGc > 2:5060875/1‑140 (MQ=255) ggATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTAGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTAGTGTATTCTTCAAAGc > 1:4945512/1‑140 (MQ=255) ggATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTACGGCGCTTTTTTGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTATTCAAttc > 1:6086414/1‑138 (MQ=255) ggATAGGATGCGGTCGCCTTCTTGGGCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAATTCGTTTCGGGTATTCTTCAATGc > 1:2851160/1‑140 (MQ=255) ggATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTTGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTGGATGCTGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCcttgg > 1:3375825/1‑139 (MQ=255) ggATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCATGGTCGCGTATGTTTTACGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCcttgc > 2:4757261/1‑140 (MQ=255) gATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTGGTCCCGGAGTTCGATGATGTCGCTTTTTTCGTATGCCGAAAGTCCTTTCGGTTATTATTGAATGCcttggg > 1:2409377/1‑138 (MQ=255) gATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCGTTGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGGGTATGCCGAAAGTGGGTTCGGTTATTATTAAATTCcatggt > 1:3929989/1‑138 (MQ=255) tGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCcttgcttg < 1:1474843/140‑1 (MQ=255) ggTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAgg > 2:5352759/1‑140 (MQ=255) gTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTAGTGTATTCTTCAATGCATTGCTTGAGGt > 2:4510498/1‑140 (MQ=255) ccTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGGTTCGTGTATTCTTCAATGCCTTGCTGGAGGTAttt > 1:5657168/1‑140 (MQ=255) ccTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCGTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCGTGCTTGAGGTAttt > 2:6540748/1‑140 (MQ=255) ccTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTACGGCGCTTTTTCGTCCGGGAGTTCGATGATTTCGATTTTTGCGTATGCCGAAAATCGTTTCGTGTATTATTAAATGGCTTGCTTGAGGTAttt > 1:3482406/1‑140 (MQ=255) tGTCTTTTATGATTTTCATGTCCTGGTCGCTTCGGTTTTCCGGCGCTTTTTAGTCCGGGAGTTCCATTATGTCGATTTTTGCGTAGGGCGACAGTGGTTTGGTGTAGTATTAAATTCCGTGGTTGAGGtatttttatttt > 1:4208733/1‑140 (MQ=255) tGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTAGTCCCGGATTTACATTATGTCGATTTTTTCGTATGCCGAAAATAGTTTAGTGTAATATTAAATTCCTTGCTTTATGtatttttatttt > 1:7196720/1‑140 (MQ=255) ttATGATTTTCATGTCCTGGTCGCTTAGGTTTTACGGCGCTTTTTAGTCCGGGCGTTCGATGTTGTCGATTTTTGGGTTGGCCCAAATTGGTTTGGTGTATTCTTAAATTCCTTGCGTGAGGTATTTTTGTTTTATtttt > 1:2633704/1‑140 (MQ=255) ttATGATTTTCATGTCCTGGTCGCGTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTAGATGATGTCGATTTTTGCGTAGGCCCAAAGTAGTTTCGTGTATTAATCAAAGCCGTTCTTGAGGTAATTTTCTTTTAGtttt > 1:701380/1‑140 (MQ=255) tATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTGGGCCCGGAGTTCGATGATGTGGATTTTTGCGTAGGCCGAAAGTGGTTTCGTGTCTTCTTCAATTAGTTTCTGTAGGTATTTTTCTTTTAGTTTTc > 1:6556507/1‑140 (MQ=255) tATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTTCGTAGGCCGAAATTCGTTTCGTGTATTCTTAAATTCCTTGCTTGAGGTATTTTTCTTTTAGttttg > 1:7388659/1‑139 (MQ=255) tATGATTTTCATGTCCTGGTCGCGTAGGTTTTCCGGCGCGTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGGTTCGTGTTTTCTTGAATGCCTTGCTTGGGGTATTTTTCTTTTAGttttg > 1:6030248/1‑139 (MQ=255) tATGATTTTCATGTCCTGGTCGCGTAGGTTTTACGGCGCTTTTTAGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTATTCAATTCCATGCTTGAGGTATTTTTTTTTTATtttta > 1:579871/1‑139 (MQ=255) aTTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGAt < 2:1289967/140‑1 (MQ=255) aTTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGAt < 1:4088116/140‑1 (MQ=255) ttCATGTCCTGGTCGCTTAGGTTTTACGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTTGGTTGGCCGAAAGTCGTTTGGGGTATTCTTCAATGCCGTGGGTGAGGTATTTTTATTTTTTTTTTGCGAtttt > 1:217246/1‑138 (MQ=255) ttCATGTCCTGGTCGCGTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTCGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGt < 2:890309/140‑1 (MQ=255) cATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTca < 1:4379567/140‑1 (MQ=255) cATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTca < 1:3324011/140‑1 (MQ=255) aTGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTcac < 1:2995037/140‑1 (MQ=255) gTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACaa < 2:2200816/140‑1 (MQ=255) ggTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTg < 2:3662914/140‑1 (MQ=255) gTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTAAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTACGATTGTCACAATATTGa > 2:4947236/1‑140 (MQ=255) gTCGCTTAGGTTTTACGGCGCTTTTTAGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTGGTGTATTCTTCAATTCCTTGCTTTAGGTATTTTTGTTTTAGTTTTCCGATTGTCACAATAtttt > 1:5221649/1‑138 (MQ=255) tCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGat < 1:1361896/140‑1 (MQ=255) gcgcggcggTGTTCCGGCGCTTTTTCGGCCGGGAGGTCGCTGCGGTCGATTGTTGCGTAGGCCGAAAGTCGTTGCGTGTATACGTCAATGCCTTGCTTGAGGTATTTTTCTTGTAGTTTTCCGATTGGCACAATATTGat < 2:7117880/133‑1 (MQ=255) cGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTAAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTACGATTGTCAAAATATTtata > 2:3019886/1‑140 (MQ=255) ttAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCGTGCTTGAGGTATTTTTGTTTTAGTTTTCCGATTTTCACAATATTGATAtta > 2:3420589/1‑139 (MQ=255) aGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTGTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTcac < 2:7196720/140‑1 (MQ=255) tgTTTTCCGGCGCATTTTAGTCCGGGCGGTCGATGATGTCGATTTTTGCGTAGACCGAAAGTCGTTTAGTGTATTCTTCAATTCCATGCTTGAGGTATTTTTATTTTAGTTTTCCGATTTTCACAAAAATTATATTcaca > 2:5681087/2‑140 (MQ=255) gTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAg < 1:63245/140‑1 (MQ=255) tttCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGt < 2:5199566/140‑1 (MQ=255) tttCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGt < 2:250162/140‑1 (MQ=255) ttacGGCGCTTTTTAGTGCGGGAGTTAGATGATGTCGAATTTTTCGTAGGCCGAAAGTCGTTTGGTGTATTCTTCAATGGCTTTGTTTATGTATTTTTGTTTTAGTTTTACGATTTTGACAAAAATGATATTCAAACGTc > 2:6005/4‑140 (MQ=255) ttCCGGCGCTTTTTAGTCCGGGAGTTCGATGATGTCGATTTTTTCGTAGGCCGAAAGTCGGTTCGTGTATTCTTAAATTCCGTGCTTTAGGTATTTTTATTTTAGTTTTACCATTGTAACAAAATTTATATTAACAggga > 2:6744549/1‑138 (MQ=255) tCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCa > 1:1897922/1‑140 (MQ=255) tCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCGTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCa > 1:945141/1‑140 (MQ=255) tCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTAAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCAAAGGTCa > 1:4641691/1‑140 (MQ=255) tCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTATTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTTATATTCACAGGTCa > 1:3857913/1‑140 (MQ=255) ccGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCGTGCTTGAGGGATTGTTCTTTTAGTTTTCCGATTGTCACACTATTGATATTCACAGGTCAt > 1:2234935/1‑140 (MQ=255) gggAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACaa > 1:6969037/1‑140 (MQ=255) ggAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGGTTCGTGTATTCTTCAATGCCTTGGTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAg < 2:5911703/140‑1 (MQ=255) gTTCGATGATGTCTATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 1:7298138/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 2:4310144/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 2:6937383/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 2:4202534/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 2:3082964/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 2:1427099/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 1:7504413/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 1:4986477/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 1:3143547/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 2:7561500/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 1:1008926/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTAGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 1:109241/140‑1 (MQ=255) gTTCGATGATGTCGATTTTTGAGTAGGCCGAAAGTCGTTTCGTGTAGTCTTCAATTCCGTGCTTGAGGTATTTTTCTTTTAGTTTTCCGTTTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTa < 2:7652457/140‑1 (MQ=255) tCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTTTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTAtt < 2:6680356/140‑1 (MQ=255) tCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTAtt < 2:4700000/140‑1 (MQ=255) cGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTc > 1:6886787/1‑140 (MQ=255) atgTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCatata > 2:639297/1‑140 (MQ=255) atgTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCatata > 2:1012096/1‑140 (MQ=255) gTCGATTTTTGCGTAGGCCGACAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAAATAGTTATTCATATAtg < 2:3744291/140‑1 (MQ=255) gTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCACTGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATAtg < 1:4839024/140‑1 (MQ=255) gTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATAtg < 2:3944152/140‑1 (MQ=255) gTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATAtg < 1:158306/140‑1 (MQ=255) gTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATAtg > 2:1172489/1‑140 (MQ=255) gTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATAtg > 2:2677083/1‑140 (MQ=255) tCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATAtgt > 2:20743/1‑140 (MQ=255) cGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATAtgtt < 1:1227095/140‑1 (MQ=255) gATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTg < 1:5081684/91‑1 (MQ=255) tttttGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCATAGGTCATCCCCACTTTAAAAACAAGTTATTCATATATGTTGTc < 1:5362637/140‑1 (MQ=255) tgtGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATATGTTGTCca < 1:6785571/138‑1 (MQ=255) tGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATATGTTGTCcaca > 2:3258048/1‑140 (MQ=255) | CGAGGGCGATGACGTGGGCGTCGGGGCTGATTTTGGATAGGATGCGGTCGCCTTCTTTGTCTTTTATGATTTTCATGTCCTGGTCGCTTAGGTTTTCCGGCGCTTTTTCGTCCGGGAGTTCGATGATGTCGATTTTTGCGTAGGCCGAAAGTCGTTTCGTGTATTCTTCAATGCCTTGCTTGAGGTATTTTTCTTTTAGTTTTCCGATTGTCACAATATTGATATTCACAGGTCATCCCCACTTTAAAAACAAGTTATTCATATATGTTGTCCACAA > NZ_CP034943/3975977‑3976253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |