| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,996,857 | C→A | 7.2% | intergenic (‑163/+43) | purA ← / ← EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,996,857 | 0 | C | A | 7.2% | 979.9 / 12.3 | 367 | intergenic (‑163/+43) | purA/EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Reads supporting (aligned to +/- strand): ref base C (183/144); new base A (2/37); total (185/182) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.63e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 392 total aligned reads displayed.
TCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTTCT > NZ_CP034943/3996718‑3996994 | tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:7546545/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:4639364/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:1843606/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:3549817/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:4581575/1‑140 (MQ=255) gATTCTATTAAAACAAATCAAGTTTATCAGTTAAGAAACATATAGTTACTTGTAAATCAGTACATTATATTAATTTAAATAATTTTTCGTTATCTTCAATTATTTTTTCTAGATTTTTATCATATCTTTGTCCTAAATAg < 2:7573299/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:7428254/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 2:6029124/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa > 2:123325/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 2:3186601/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:2996061/140‑1 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:6371999/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 2:3360614/1‑140 (MQ=255) aaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtttt < 1:4290954/140‑1 (MQ=255) aaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCAGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtttt < 1:2201229/140‑1 (MQ=255) aaTCAAGATTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCCTTGTCCTAAAAAGCTCGTGAAACTTTTa > 2:5592162/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAAGTTTTATc > 2:4016158/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 2:1056568/1‑140 (MQ=255) tATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCTCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTATATCCTTTAGc > 2:5106148/1‑140 (MQ=255) tATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGc < 2:6845270/140‑1 (MQ=255) aTCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCa < 2:2375549/140‑1 (MQ=255) tCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCAc > 1:6733695/1‑140 (MQ=255) tGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaa < 1:7313315/140‑1 (MQ=255) tGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGCAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaa < 1:2436989/140‑1 (MQ=255) cAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTa < 2:230461/140‑1 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCTTTCGCTTCCATTCGATTTACAAGCGTTTTCACATCGCATTGTCCTAAAAAGCTCGTGAAACTATAATCCTTTAGCACGAAAAAGAGTTACt > 1:6230342/1‑140 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACt > 1:7622167/1‑140 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACt < 2:3634045/140‑1 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACt < 2:7372933/140‑1 (MQ=255) aaaGTCAATTGTAAATCCGACCATTAAATTCATGTAAATCAATATTCGTTCGCGTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGAGAAACTTTTATCCTTTAGCACGAAAAAGAGGTACtt < 1:1958538/140‑1 (MQ=255) aGTCAATTGTACATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGc < 2:5644651/140‑1 (MQ=255) aaTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGa < 1:7204746/140‑1 (MQ=255) aaTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGa < 1:1068630/140‑1 (MQ=255) aaTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGa < 1:444399/140‑1 (MQ=255) aTTGTAAATCCGAACATTAAATTAATGTAAATCAATAGTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGat < 1:5199904/140‑1 (MQ=255) ttGTAAATCCGAACATTAAATTACTGTAAATCAATATCCGGTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata < 1:4834178/140‑1 (MQ=255) ttGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata > 2:667345/1‑140 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 1:6317261/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 2:4932203/140‑1 (MQ=255) gTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACACGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATc > 2:154553/1‑140 (MQ=255) aaTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCt > 2:5261578/1‑140 (MQ=255) aTCCGAACATTAAATTAATGTAAATCTATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTACTAAAAAGCTCGTGAAACTTTTATCCTTGAGCACGAAAAAGAGTTACTTGCCTGATATCCCtt < 2:1898669/140‑1 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCtt > 2:4049335/1‑140 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGAACGAAAAAGAGTTACTTGCCTGATATCCAtt > 2:2750408/1‑140 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTGTAGCACGAAAAAGAGTTACTTGCCTGATATCCCtt < 2:2509071/140‑1 (MQ=255) atcATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTGGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa < 2:7135531/138‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa < 1:395160/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa < 2:6172395/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa < 1:420440/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 1:606199/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 1:5491499/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 1:5667264/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTATCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 1:6528442/1‑140 (MQ=255) taaattaaTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCAt > 1:5440877/1‑140 (MQ=255) aTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACg > 1:325215/1‑140 (MQ=255) tttAAATAACTATTGGTTCGCTTCAATTCTTTTTACATGGGTTTTCTATTCGAATTTTCCTAAAACCCTCGTGAAACTTTTATCATTTCCCACTAAAATGTTTTACTTGCCTGATATCCCTTTTGTATTAATAAAAACGa < 2:3771790/138‑1 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCCTTGTCATAAAAAGCTCGTGAAACTTTTATCCTTTAGCAGGAAATAGAGTTACTTGCCTGATATCCGTTTTGTATTGATAAAAACGa > 1:6254654/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTATCACGAAAAAGAGTTACTTGACTGATATCCCTTTTGTATTCATAAAAACGa > 2:4642775/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAActa > 2:7000597/1‑138 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:1017050/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:1193425/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:6834630/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:5564771/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCGGATATCCCTTTTGTATTCATAAAAACGa > 2:6261687/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGATCGTGAAAATTTTATCCTTTAGCACTAAAAAAAGTTAATAGCATGATATCCCTTTTGTATTCATAAAAActa > 2:5812413/1‑138 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGc > 2:5082092/1‑140 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGc > 2:4325154/1‑140 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGc > 2:1374797/1‑140 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGc > 2:2217546/1‑140 (MQ=255) tggttcgCTTCATTTCGTTTTACAAGCGTTTTCTCATCGATTTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCATGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTc < 2:6567091/138‑1 (MQ=255) tcgttggCTTCAATTGTTTTTACATGCTTTTTCTCATCGATTTGTCTTAAAAAGGTTGTTAAATTTTTTTAGTTTCTCACGAAAAAGAGTATCTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTc < 2:4112083/140‑1 (MQ=255) tcgttcgCTGCCATTCGTTTTACACGCGTTTTCTCAACGCATTGTCATAAAAACCTCGTTAAACTTTTATCCTTTACCACCAAAAAGAGTTACTTGCCTGATATCCATTTTGTATACATAAAAACGACTCGCCAACCGTc < 2:3097035/140‑1 (MQ=255) cgttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTcc > 2:296965/1‑140 (MQ=255) gttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATACTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTcag > 2:4788526/1‑138 (MQ=255) ttcgCTTCCATTCGTTTTAAAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTCAAACTTTTATCCTTTAGCACTAAAAAGAGTTACTTGCCTGATAGCCCTTTTTTATTCATAAACACGACTCGCCAACCGTCCgg < 2:5931240/140‑1 (MQ=255) tgggtttCCCTTCCTTTTACCAGCGTTGTCTCAGCGCATTGGCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCGCATATCCGTGTTGTATTCAGAAAAACGACTCGCCAACCGTCCgg < 2:4377483/135‑1 (MQ=255) tgcgCTTCCTTGGGTTTTACACGCGTTTGCTCATCGCATGGTCCTAAAACGCTCGGGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTGGCCTGATATCGCTTTTTTATTCATAAAAACGACTCGCCAACCGTCCgg < 2:389364/138‑1 (MQ=255) tcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGa > 2:2996013/1‑140 (MQ=255) tcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCAGAAAAAAGACTCGCCAACCGTCCGGa > 1:3031498/1‑140 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTCTTCATAAAAACGACTCGCCAACCGTCCGGATcc > 2:6758894/1‑140 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATcc > 1:6655665/1‑140 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATcc > 2:6525281/1‑140 (MQ=255) atgggTTTTAAAAGCTTTTTCTCATCGCTTTGTCCTAAAAAGCTCGTTAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTAt < 2:5491499/136‑1 (MQ=255) ttttttACATGCGTTTTCTCATCGATTTTTAATAAAAAGCTGGTTAAAATTTTATCCTTTAGCACCAAAAAGAGTTAGTTGCCTTATATCCCTTTTTTATACATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGt < 1:7653556/138‑1 (MQ=255) ctttttACAAGCTTTTTCTCATCGCATTGTCATAAAAAGCTCTTTAAACTTTTATCCTTTAGCACGAAAAAGATTTACTTGCCTGATATCCCTTTTTTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGt < 2:5328338/138‑1 (MQ=255) ttttACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa > 2:163884/1‑140 (MQ=255) ttttAAAAGGTTTTTATAATCGATTTTTCAAAAAAAGATGTTTAAATTTTTATCCTTTAGCACCAAAATTTTTTAGTTGCATTATATCCTTTTTTTTTTAAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 1:1521859/140‑1 (MQ=255) aCAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGCGAAACTTTTATCCTTTAGCACGAAAACGTGTTACTTGCCTTATATCCCTTTGGTTTTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGcc < 2:3524074/140‑1 (MQ=255) gggTTTTCGAATCGCTTTGTCCAAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAGTTGCCGGATATCCCTTTTGTATTCATAAACACGACTCGCCAACCGTCCGGATCCTCTATCCTCACGCCTCCa < 2:2025674/138‑1 (MQ=255) gtttttCTCTGCGCTTTTTCAAAAAAAGCTGTTCAAAATTTTAACCTTACCCCCCAAAATGTTTTCCTGGCCTTAAAACACTTTTGTAATCAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 1:3818328/138‑1 (MQ=255) ggTTTTCTCATCGCTTTGTCCTAAAACGCTCGTCAAATTTTTATCCTTTAGCACCAAAAAGTGTTAGTGGCCTGATATCCCTTTTTTATTAATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 1:6920753/139‑1 (MQ=255) ttttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATgg > 1:3727396/1‑140 (MQ=255) ttttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATgg > 1:4060782/1‑140 (MQ=255) ttttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATgg > 1:2704020/1‑140 (MQ=255) tttCTCATCGCATTGTCCTAAAAAGCACGTTAAACTTTTAACCTTTCGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTTGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 1:2831569/140‑1 (MQ=255) atcAGCGCATTGTCCAAAAAAGCTCGTGAAACTTTTATCCTTTCGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTcc < 2:2647338/139‑1 (MQ=255) tCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGc > 2:6430079/1‑61 (MQ=255) taTTGTCAAAAACAGCTGTTCAAACTTTTATCCTTGACCACCAAAAAGAGTTAGTTGCCTGATATCCCTTTTGTATTCAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACgg < 1:1246951/139‑1 (MQ=255) aTTGTCAAAAAAAGCTCGTGAAACTTTTATCCTTTACCACCAAAAAGAGTTACTTGCCTGATATCCCTTTTTTATACAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACggg < 1:1707706/140‑1 (MQ=255) tCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACCAAAAAGAGTTAGTTGCCTGTTAGCCGTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTtct < 1:1843606/140‑1 (MQ=255) | TCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTTCT > NZ_CP034943/3996718‑3996994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |