| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 376,966 | A→C | 6.6% | K781T (AAA→ACA) | srfAA → | surfactin non‑ribosomal peptide synthetase SrfAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 376,966 | 0 | A | C | 6.6% | 1554.9 / 20.3 | 664 | K781T (AAA→ACA) | srfAA | surfactin non‑ribosomal peptide synthetase SrfAA |
| Reads supporting (aligned to +/- strand): ref base A (305/285); new base C (72/2); total (377/287) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.72e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 665 total aligned reads displayed.
TGTTGAAGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACGGCTGAG > NZ_CP034943/376828‑377102 | aGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTg > 2:4511683/1‑140 (MQ=255) aGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTg < 1:6948031/140‑1 (MQ=255) aGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTg < 2:3683757/140‑1 (MQ=255) aGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTg < 1:4054564/140‑1 (MQ=255) aTTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAg < 1:3665084/131‑1 (MQ=255) aTTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGGGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGa > 2:2353160/1‑140 (MQ=255) ttAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAAt < 2:2080164/140‑1 (MQ=255) ttAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAAt < 2:5872577/140‑1 (MQ=255) ttAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATCTGTACGGGCCGACTGACACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCCCTGGGGAAt > 2:5048654/1‑140 (MQ=255) tAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATa < 1:45065/140‑1 (MQ=255) cAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCACTCAGCGTATTTGCCGATCGGGAAAGCGCTGGGGAATAACCGTGta > 1:4647808/1‑140 (MQ=255) cAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGACCGCGCTGGGGAATAACCGTTta > 1:1002845/1‑140 (MQ=255) cAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTta > 1:2058557/1‑140 (MQ=255) gcgcCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATAtttt > 2:7185408/1‑140 (MQ=255) gcgcCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTg > 2:4068227/1‑117 (MQ=255) cgccgcGTTTGACCAATGTGTACGGGCCGACTGAAAGGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTg < 1:5046869/140‑1 (MQ=255) cgccgcGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGCCAGCGCTGGGGAATAACCGTTTATATATTTTg > 1:4344302/1‑140 (MQ=255) cgccgcGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTg > 2:3918836/1‑140 (MQ=255) cgccgcGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTg > 1:4892387/1‑140 (MQ=255) cgcgTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGAt < 1:3551821/140‑1 (MQ=255) cgTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTGATATATTTTGGATCa > 1:75663/1‑140 (MQ=255) cgTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGGCTGTGGCGATCGGGACAGCGCTGGGGAATAACCGTTTAGATATTTTGGATCa > 2:7299764/1‑140 (MQ=255) gACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGACTAACCGTTTATATATTTTGGATCAAagag > 1:3325836/1‑140 (MQ=255) gACCAATGTGTACGGGCCGACTGAAACGTGTGGTGACGCGTCCGTTCAGCAGGTTATCCCAGAGAGTGCCGTTCACTCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGACTACCCGTGGATATATGTTGGATCAAagag > 1:597976/1‑140 (MQ=255) aTGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGaggcagg < 1:749206/140‑1 (MQ=255) tgtgTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGACTAACCGTTTATATATTTTGGATCAAAGaggcaggc > 2:7123443/1‑140 (MQ=255) tgtgTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGaggcaggc > 1:5764469/1‑140 (MQ=255) tgtACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCTGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTg < 1:934480/140‑1 (MQ=255) tgtACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTg < 2:673976/140‑1 (MQ=255) tACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCa > 2:4887008/1‑140 (MQ=255) gCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTCTGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGCTCAAAGAGGCAGGCTGCAGCCgg > 2:6099549/1‑140 (MQ=255) gCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTCTGTGCCGATCGGGAAAGCGCTGGGGAATCACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCgg > 2:4093784/1‑140 (MQ=255) gCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAACGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCgg > 2:5666255/1‑140 (MQ=255) gCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCgg > 2:5171432/1‑140 (MQ=255) aaaCGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGtgtg > 1:4734658/1‑140 (MQ=255) aaaCGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGAGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGtgtg > 1:7014448/1‑140 (MQ=255) aaCGTGTGTTGACGCGTCCGTTCATCAGGTTATCCGAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGTGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTgg < 1:2195959/140‑1 (MQ=255) gtgtTGACGCGTCCGTTCATCAGGTTATCCCCGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTGTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 1:2526726/140‑1 (MQ=255) gtgtTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 1:996553/140‑1 (MQ=255) gtgtTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 2:4357927/140‑1 (MQ=255) gtgtTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 2:3802260/140‑1 (MQ=255) gtgtTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 1:1887010/140‑1 (MQ=255) gtgtTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 1:1249374/140‑1 (MQ=255) gtGAAGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAg < 1:6694019/139‑1 (MQ=255) gtcgcgTCCGTTCATCAGTTTTTCCCTGACAGTGCCGTTCTATAATCGTATGTGCCGTTCGGGAAAGCGGTGGGGATTTACCGTTTATATATTTTGGATCAATGAGGCATTCTGCAGACGGAAGGTTTGGAGGGCGTGCt < 2:7602586/138‑1 (MQ=255) gACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCt < 2:4605700/140‑1 (MQ=255) aCGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCtt > 2:4768141/1‑140 (MQ=255) tCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCCGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTatat > 1:3147686/1‑140 (MQ=255) tCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAACGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTatat > 1:3829603/1‑140 (MQ=255) ttactcaGGTTATCCCACAGCGTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCACCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCa < 2:5231958/136‑1 (MQ=255) ttCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCa < 2:2904093/140‑1 (MQ=255) catcaGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAgg < 1:7681893/140‑1 (MQ=255) caGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 2:2705105/140‑1 (MQ=255) caGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 1:1586179/140‑1 (MQ=255) gTTATCCCAGAGAGTGCCGTTCAATCATAGTATGTGACGAACGGGAAAGCGCTGGTGAATAAAAGTTTAGATATTTTCTATCAAAGAGGCATACTTCAGCCGGAATGTTTGGCGGGCGAGCTTTATATCTCAGGCGACgg > 2:172974/1‑140 (MQ=255) gTTATCCCAGAGAGTGCCGTTCAATCAGCGTCTGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGCCGACgg > 2:2214026/1‑140 (MQ=255) tATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGgtg < 2:4940146/140‑1 (MQ=255) tATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGgtg < 2:856813/140‑1 (MQ=255) tATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGgtg < 2:6982212/140‑1 (MQ=255) cccAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAACGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTg > 2:6446725/1‑140 (MQ=255) cccAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTg > 2:3263473/1‑140 (MQ=255) cAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGc < 2:6628869/140‑1 (MQ=255) cAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGc < 2:1949017/140‑1 (MQ=255) cAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGc < 1:7111608/140‑1 (MQ=255) cAGAGAGTGCCCTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGc < 1:6109945/140‑1 (MQ=255) agagTGCCGTTCAATCAGCGTCTGTGCCGATCGGGAAAGCGCTGGGGAATAACCGGTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGa > 1:5274004/1‑140 (MQ=255) agagTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGACTAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGa > 1:2739841/1‑140 (MQ=255) agagTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCg < 1:6362412/139‑1 (MQ=255) gagTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAg < 2:6341259/140‑1 (MQ=255) agTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAgg < 1:2452488/140‑1 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 2:3144020/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 1:3431600/123‑1 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGc > 2:1165235/1‑139 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 2:7491742/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 1:5400291/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGGTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 2:3583997/1‑140 (MQ=255) ttCAATCAGCGTCTGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTa > 2:6857269/1‑140 (MQ=255) ttCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTa > 1:6777251/1‑140 (MQ=255) cAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACa < 2:1286851/140‑1 (MQ=255) aaTCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACAt > 2:249903/1‑140 (MQ=255) tCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACAttt > 1:6500166/1‑140 (MQ=255) gCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGcc > 1:2222315/1‑140 (MQ=255) cGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCt < 1:1490575/140‑1 (MQ=255) cGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCt < 2:2998238/140‑1 (MQ=255) gTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGGTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTg > 2:5817962/1‑140 (MQ=255) tATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGa > 2:5483224/1‑140 (MQ=255) tATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGa > 1:7322571/1‑140 (MQ=255) tgtgCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAAt > 2:1606432/1‑140 (MQ=255) tgCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTg > 2:5318526/1‑140 (MQ=255) tgCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTg > 1:71815/1‑140 (MQ=255) ccGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGAc > 1:1339797/1‑140 (MQ=255) ccGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGAc > 1:174592/1‑140 (MQ=255) gATCGGGACAGCGCTGGGGACTAACCGTTTATATATTTTGGATCAAATAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACgg > 2:1370740/1‑140 (MQ=255) gATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACgg > 2:3430876/1‑140 (MQ=255) gATCGGGAACGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACgg > 1:4194074/1‑140 (MQ=255) gATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa > 1:308022/1‑99 (MQ=255) gATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACgg > 1:2893064/1‑140 (MQ=255) gATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACgg > 1:5588725/1‑140 (MQ=255) gATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACgg > 1:6844853/1‑140 (MQ=255) gggAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACGGCTga < 2:1536160/140‑1 (MQ=255) | TGTTGAAGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACGGCTGAG > NZ_CP034943/376828‑377102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |