| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 438,792 | C→A | 8.1% | intergenic (‑58/‑48) | gabR ← / → gabT | transcriptional regulator GabR/4‑aminobutyrate‑‑2‑oxoglutarate transaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 438,792 | 0 | C | A | 8.1% | 956.5 / 13.3 | 398 | intergenic (‑58/‑48) | gabR/gabT | transcriptional regulator GabR/4‑aminobutyrate‑‑2‑oxoglutarate transaminase |
| Reads supporting (aligned to +/- strand): ref base C (212/138); new base A (2/46); total (214/184) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.24e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 401 total aligned reads displayed.
TTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCGCA > NZ_CP034943/438653‑438930 | tttCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATAcc < 1:1044506/140‑1 (MQ=255) ttCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCa > 1:3169914/1‑140 (MQ=255) ttCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCa > 2:4305949/1‑140 (MQ=255) cTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCaaa < 1:2316398/140‑1 (MQ=255) ttttttAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCaaaaa < 1:5088566/140‑1 (MQ=255) tttttGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAg < 2:7658247/140‑1 (MQ=255) tttttGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAg < 1:5007085/140‑1 (MQ=255) gATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATgg < 2:7196607/140‑1 (MQ=255) gatatataTAATCGGATTGTTCTGAGGGGTCGTGTGTGAATGTGATGTCAATTTGCAGATTCTCCTTCTGTTACAATAAAAAATTTATATTTGTTACTTTTCATCATACAAAAAAGAAGTCACAATGGTAAGAAAATAGc < 2:2275/140‑1 (MQ=255) tttaATCGGCTTGTTCTGAGCGGTCGATTGTCATTGTTATGTCCATTTGCAGATTCTCCTTATGTTACCATCAAAAATTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCATAATGGTAATAAAATAGCGACAgg < 2:3815704/138‑1 (MQ=255) tataATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATTTCCATTTGCAGATTCTCCTTCTGGTACAAACAAAAAGTTATATTTGGTACTTTTCATCATACCAAAAAGAAGAAAGAATGGTAAGAAAATAGCGACAgg < 2:5641362/140‑1 (MQ=255) ataATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAggg > 2:1044294/1‑140 (MQ=255) ataATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAggg > 2:7106560/1‑140 (MQ=255) ataATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAggg > 2:2662768/1‑140 (MQ=255) tCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGAc > 1:3959262/1‑140 (MQ=255) gggCTTGTTCTGAGCGGTCGAGGGTGAATGTGATGTCCAGTTGCAGATTCTCCTGCTGGTACCATAAAAAAGTTATAATTGGTACTTTTAATCATACCAAAAACAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACa < 2:6868961/139‑1 (MQ=255) cGGGTTGTTCTGAGCGGGCGAGTGTGAATGTGATGTCCATTTGCAGTTTGTCATTCTGGTACAATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACa < 2:6025531/140‑1 (MQ=255) cGGATTGTTCTGAGCGGTCGTGTGTTAATGTGTTGTCCTTTTGCTGATTCTCCTTCTGGTACCATCAAAAAGTTATAATGGGTACTTTTCATCATACCAAAAAGAAGTAAGAATGGTAAGAAAATCGCGACAGGGGGACa < 2:3099931/140‑1 (MQ=255) gCTTGTTCTGAGCGGTCGCGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATAGCAAAATGAAGTCAGCATGGTAAGAAAATAGCGCCAGGGGGACATa > 2:6320333/1‑140 (MQ=255) cTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTAGCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATAc > 1:4791664/1‑140 (MQ=255) cTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATAc > 1:5722338/1‑140 (MQ=255) cTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATAc > 1:36023/1‑140 (MQ=255) cTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATAc > 2:5186387/1‑140 (MQ=255) cTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATAc > 2:6163442/1‑140 (MQ=255) tGTTCTGCGGGCTGGAGTGTTATTTTGATGTCAATTTGCAGAGACACCTTCTGGTCCCAAAAAAATTTTATATTTGTTACTTTTAAACACACAAAAAACAAGTCAGAATGTAAAGAAAACAGCGACAGGGGGACATACGc < 1:3788993/140‑1 (MQ=255) gTTCTGAGGGGTCGAGTGTGAATTTTATGTCCTTTTCCAGATTCGCCTTCTGGTACCATAAAAAATTTATAATTGGTACTTTTCATCTCACCAAAACGAACTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCa < 2:2923103/140‑1 (MQ=255) tGAGCGGTCGTGTGTGAATGTGATGTCCTTTTGCAGATTCTCCTTCTGTTACCATAAAAATTTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGATTGGTAAGAAAATAGCGACAGGGGGACATACGCATGAg < 2:3505090/140‑1 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTACGAAAATAGCGACAGGGGGACATACGCATGAGTc > 2:2356236/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 2:3970494/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 2:1865914/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 1:1454627/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 1:5857484/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAAGGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 2:5941591/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATAAAAAAGTTATAATTGGTACTTTTCATCATAACAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 1:2102746/1‑140 (MQ=255) tgtgtaGTGTGTATTTGTTGTCCATTGGCAGTTTCTCCTTCGGGTACCATAAAAAAGTTATAATTGTTAATTTTCTTAATACCAAAAATAAGTCAGATTGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCaaa < 2:3887441/135‑1 (MQ=255) gttCGAGTTTGAATGTGAGGTCCTTTTGATTTTTATCCTTCTGGTACAAAAAAAATTTTATAATTGTTACTTTTAATCTTCCAAAAAAGAAGTCAGAAGGCAAAGAAAATAGCGACAGGGGGACATACGCATGAGTCaaa < 1:1585152/138‑1 (MQ=255) gtgggAGTTTTAATGTTTTGTCCTTTCGCAGTTTCTCCTTCTGGAACCATAAAAAAGTTATAATTGCTCCTTTTAAACATACCAAAAAGAAGTAAGATTGGTAATAAAACAGCGACAGGGGGACATACGCATGAGTCaaa < 1:828931/136‑1 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATgg > 1:7484386/1‑99 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 2:5269063/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:1326717/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 2:6711752/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 2:652029/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:735093/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:6274982/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:6019596/1‑140 (MQ=255) aGTGTGAATCTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGTTACTTTTCAACATACAAAAAAGAAGTCAGAATGGTAATAAAATAGAGACAGAGGGACAAACGCATGATTCAaacaaaa > 2:7154857/1‑138 (MQ=255) ttgtgAATGTTATGTCCATTTGCATTTTCTCCTTCTGGTACCATAAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCATACTGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACag < 2:1176176/139‑1 (MQ=255) tgtgAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagc > 2:2877594/1‑140 (MQ=255) tttattgtgATGTCAATTTTCAGTTTCTCCTTCTGGAACCAAAAAAAATTTTTATTTGGAAATTTTAATAACAAAAAAAACAAGTCAGATTGTAAACAAAATCGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 1:3005949/135‑1 (MQ=255) tttaaTGTTATTTCCATTTGAATATTATCATTCTGTTACCATAAAAAATTTATAATTGGTAATTTTCATCATACCAAAAATAATTCAGAATGGTAACAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 2:2255913/137‑1 (MQ=255) gtgAATGTTTTGTCCTTTTGCAGAGTCTCCTTCTGGTACCACAAAAATTTTATACTTGGTACTTTTCACAATACCAAAAAGAAGTCATAATGTTAACAAAAAAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 1:4249750/140‑1 (MQ=255) gtgAATGTTATTTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTAATTTTCATCATACAAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 2:5430447/140‑1 (MQ=255) gtgAATGTTATGTCCATTTGCAGATTCTCCTTCTGGTAACATCAAAAATTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 2:4627489/140‑1 (MQ=255) aTGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagcaagca > 2:154229/1‑140 (MQ=255) aTGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagcaagca > 2:5783160/1‑140 (MQ=255) aTGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagcaagca > 1:1887969/1‑140 (MQ=255) tgttATGTCCATTTGCATATTCTCCTTCTGGTACAATCAAAATGTTATAATTGGTACTTTTCATCATACCAAAAACAAGTCAGATTGGAAAGAAAATCGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCAt < 2:1997906/140‑1 (MQ=255) tgtgATGGCCCGTGGCACATTCTCCTTCTGGAACCAACAAAAAGTCAAAATGGGTCCTTTTCATCATACAAAAACCATCGCAGAAGGGTACGAAAATCGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCAt < 2:469249/140‑1 (MQ=255) gATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCAc > 1:4113390/1‑140 (MQ=255) aTGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTAGTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCCTGAGTCAAACAACAGCAAGCATCACg > 1:6169053/1‑140 (MQ=255) aTGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACg > 1:3438579/1‑140 (MQ=255) aTGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACg > 1:4326445/1‑140 (MQ=255) aTGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACg > 1:4947634/1‑140 (MQ=255) aTGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACg > 1:6388539/1‑140 (MQ=255) aTGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTATCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAAAAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACg > 1:7420486/1‑140 (MQ=255) tGTCAATTTGCAGTTTCTCCTTCTGTCACAATAAAAATTTTATAATTGTTACTTTTCACCATACCAAAAATAAGTCAGATTGGTAACAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGa < 1:4507143/140‑1 (MQ=255) ccATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTTGTACTTTTCATCATACAAAAAAGAAGTCAGAATGGTAAGAAAATAGAGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTg > 2:3688194/1‑140 (MQ=255) cATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGc > 2:3309333/1‑140 (MQ=255) tttGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGccc > 1:2487500/1‑140 (MQ=255) tGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAg > 1:7090488/1‑140 (MQ=255) ttatgctcCTTGTGCTACCATAAACAAGTTTTAAGTTTTAGTTTACAACATACAAAAAATATCACACATTGGTACGATAATCGCGACAGGGGGACATCCGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTgg < 1:7045095/135‑1 (MQ=255) gATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGgc > 1:7194877/1‑140 (MQ=255) tctcCTTCTGGTACCAAAAAAAATTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGTTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGgcagc < 2:6760524/140‑1 (MQ=255) ctcCTTCTGGTACCATCAAAAATTTATAATTGGTACTTTTCAACATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGgcagca < 2:7223588/140‑1 (MQ=255) cgccTTCTGGTACAAAAAAAATTTTATATGTGTAACTTTTAATCTAACAAATAATAAGACATATTGTTAAGAATAAAGCGACAGGGGGAAATACGCATGAGTCAAACAACAGAAATAATCACGAAGGCCCAGTGgcagca < 1:1806456/138‑1 (MQ=255) tCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAAc > 2:2791883/1‑140 (MQ=255) aCCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGc > 2:1426302/1‑140 (MQ=255) cATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCaa > 1:5620190/1‑140 (MQ=255) tCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAAtt > 2:7368657/1‑140 (MQ=255) cAAAAAGTTATATTTGGTCCTTGTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTc < 2:4514978/140‑1 (MQ=255) cAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTc < 2:7535537/140‑1 (MQ=255) aaaaaaGTTATAATTGGTAATTTTCAACATACCAAAAAGAAGTCAGAATGGTAATAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTc < 2:7069495/139‑1 (MQ=255) ttATAATTGTTAATTTTCATCATACCAAAAAGAAGTCACAATGGTAAGAAAAGAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACGGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCa < 2:2155017/140‑1 (MQ=255) ataATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaac < 2:1775820/82‑1 (MQ=255) ataATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTc < 2:1642402/131‑1 (MQ=255) ataATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTc > 1:1642987/1‑131 (MQ=255) ataATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCaaa > 1:3481502/1‑140 (MQ=255) aTTGGTACTTTTCATCATACCAAAAAGAATTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGgt < 2:2553486/140‑1 (MQ=255) aTTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGgt < 2:4379660/140‑1 (MQ=255) aTTGGTACTTTTAATCATACAAAAAACAAGTCAGAAGGGTAATAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGgt < 2:6215762/140‑1 (MQ=255) ggTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGtgtg > 1:1226640/1‑140 (MQ=255) ggTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATAAGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTAGTCTCGAAAGGtgtg > 2:138401/1‑140 (MQ=255) tACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGCGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAg > 1:544723/1‑140 (MQ=255) cTTTTCATAATACAAAAAAGAAGTCAGACTGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCa < 2:5044697/140‑1 (MQ=255) tcatcaTACCAAAATTAATTCAGAATGTTAATAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACgg < 2:4209068/140‑1 (MQ=255) catcagACCAAAAAGAAGTCAGAATGGTAAGAAAATCGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGc < 2:2069116/140‑1 (MQ=255) tACAAAAAATAAGACATAATGGTAATAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCg < 1:6646943/140‑1 (MQ=255) gaCCAAAAATAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCg < 1:3389643/139‑1 (MQ=255) ccAAAAATAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCGCa < 2:4955222/140‑1 (MQ=255) ccAAAAAGAAGTCCGACTGGTACGAAAATAGCGACAGGGGGACATACGCATGAGTCAACCAACCGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCGCa < 2:3219098/140‑1 (MQ=255) | TTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCGCA > NZ_CP034943/438653‑438930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |