| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 549,119 | T→G | 14.4% | L44R (CTG→CGG) | EO946_RS02865 → | PLP‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 549,119 | 0 | T | G | 14.4% | 1024.1 / 35.2 | 469 | L44R (CTG→CGG) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (211/167); new base G (4/85); total (216/253) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.40e-21 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 474 total aligned reads displayed.
ACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATA > NZ_CP034943/548980‑549258 | acaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCt < 2:1468311/140‑1 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 1:1832002/1‑140 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 2:2625563/1‑140 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 2:4265193/1‑140 (MQ=255) aacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGGTTTATCGCTATTTCAAAGAAAACCTGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg > 2:4844220/1‑140 (MQ=255) aacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGTAGCTCCCTTCCAAAAGACTCCTgg > 2:1954648/1‑140 (MQ=255) aacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg > 1:1954494/1‑140 (MQ=255) aacCCAAATGGAGATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg > 2:4593338/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg < 1:3488614/140‑1 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 1:2715623/1‑140 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCa > 1:322896/1‑140 (MQ=255) gATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCGCCCTTCCAAAAGACTCCTGGCGAGTCAGCt < 2:6127623/140‑1 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGACTGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:1352951/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTc < 1:3380412/134‑1 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:2323505/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:1555422/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTGTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGTAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:6226185/1‑140 (MQ=255) cccgacTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa < 1:4725308/135‑1 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa < 1:3849562/140‑1 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa > 2:5411147/1‑140 (MQ=255) cACGCCGTTTTTGACTAGAACTCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa < 2:1884771/140‑1 (MQ=255) cGCCTTTTTTGAATATAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGCGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 1:7031383/140‑1 (MQ=255) cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGCCTCCTGGCGAGTCAGCTTTCCATc < 2:3817629/140‑1 (MQ=255) cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 2:2339193/140‑1 (MQ=255) tttttGAATATAATTCTTGATAGACCGCTTTATCAGCAGCTTTATCGATTTTTCAAACAAAACATGCACCCGGGGCGTATTAAAAAAGCAATGAAGCTCCCTACAAAAATACTCCTGGCGAGTCAGCTTTCCATCATTCa < 2:6637219/140‑1 (MQ=255) ttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCaa > 1:4346715/1‑140 (MQ=255) ttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCaa > 2:673927/1‑140 (MQ=255) ttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCaa > 1:6069984/1‑140 (MQ=255) ttttAATAGAAATCTGGATTTTCCGCTTTATCCGCAGCTTTATCGCAATTTCAACGAAAACAGGCATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAACCACTCCTGGCGAGTCAGCTTTCCAACAGTCaca < 2:5696943/140‑3 (MQ=255) tttaaTAGAATTGGGGATATTCCGCTTTATCAGCATCTTTCTCGATATTTAAAATAAAACTTGCATCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAACCACTCCTGGCGAGTCAGCTTTCCATCCGTCAAAc < 2:7064069/137‑1 (MQ=255) ttGAATAGAAAGCGTGATATTCCGCTTTACAAGCAGCTTTATCGATTTTTCAAACAAAACATCCATCCGGGGCTTATTCAAAAAGCAATGAAGCTCCCTTCCAAAAGACGCCGGGCGAGTCAGCTTCCCATCAGTCacac < 2:4232973/140‑1 (MQ=255) ttGAATACAAATCTGTATATTCCGATTTATCAGCAGCTTTATCGCTATTTAAAAGAAAAAATGCATCCGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAAc < 2:6017450/140‑1 (MQ=255) tAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAACACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTg > 2:2458068/1‑140 (MQ=255) tAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGCATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCGTTCCATCAGTCACACGACTg > 1:1213768/1‑140 (MQ=255) tAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTGCCATCAGTCAAACGACTg > 2:106182/1‑140 (MQ=255) cTGTATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAACAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCACCAGTCACACGACTGTAGAACg < 2:5899801/140‑1 (MQ=255) cTGTATATTCCGATTTATCAGCAGCTTTATCGCTATTAAAAACAAAACATGCATCCGGGGCTTATAAAAAAAGGAAGGAAGCTCCCTTCCAAACCACTCCTGGCGAGTCAGTTTCCCATCAGTAAAACGACTGTAGAACg < 1:442483/140‑1 (MQ=255) gtatatTCCGATTTATCAGCAGCTTTATCGATATTTCAAACAAAACATCCATCAGGGGCGTATTCAAAAAGCAATGAAGCTCCCTCCCAAAACACTCCGGGCCAGTCCGCTTCCCATCAGTCAAACGACTGTAGAACGTg < 1:6590261/138‑1 (MQ=255) tatTCCGCTTTATCAGCAGCTTTATCTATATTAAAAACAAAAAATCCATCAGGGGCTTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACACCTGGCTAGTCACCTTTCCATCAGTCAAACGACTGTAGAACGTGCCt < 2:3973356/140‑1 (MQ=255) cgatttATCAGCAGCTTTATCGATATTACAAACAAAACATGCATCAGGGGCTTATAAAAAAAGGAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGACAAACGACTGTAGAACGTGCCTATGaa < 2:3610405/137‑1 (MQ=255) cGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGaa > 1:7372271/1‑140 (MQ=255) cGCTTTATCAGCAGCTTTATCGCTATTACAAAGAAAACATGCAACCGGGGCTTATTCAAAAAGTAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGaa < 2:7370176/140‑1 (MQ=255) gCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAAc > 1:817776/1‑140 (MQ=255) tacccgcagcTTTATCTATATTTAAAAGAAACCATGCATCTGGGGGGTATACAAAAAGTAATCACGCCCCGTTCCAAAACACTCCGGGCGCGGCTGATTTCCATCCGTCACACGACTGTAGAACGTGCCTATGAACAGCt < 1:6394199/135‑1 (MQ=255) tATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCt > 2:3320748/1‑140 (MQ=255) actcaagcTTTATCCCTATTTAAAAGAAACCTTTCATAAGGCGCTTTCACAAAATGGAAAGATGCTCCCTTCCAAATCAATCCTGCCGAGTCAGTTTTCCTTCAGAACCACGACTGTAGAACGTGCCTATGAACAGCTtg < 2:5480326/135‑1 (MQ=255) gcagcTTTATCGCTCTTTCAAAGAAAACATGCATCAGGGGCGGATGCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCGTTCCATCAGTCAAACGACTGTAGCACGTGCCTCGGAGCAGCTtgctg > 2:4534994/1‑140 (MQ=255) cagcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtgctgc > 2:517877/1‑140 (MQ=255) aggtttATCGCAATTTAAAATAAAAAATGCTTCAGGGGCTTTTAAAAAATGGAATGAAGCTCCCTTCAAAACGACACGTGGCTATTAATCTTTCAATCTTTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:3110249/137‑1 (MQ=255) agcTTTCTCGCTATTAAAAACAAAAAATCCACCCGGGGCGTATTAAAAAAGCAATGACGCGCCCTACCAAAACACCCCTGGCGAGACAGCTTACCACCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:3677283/140‑1 (MQ=255) agcTTTATCGCTTTTTAAAACAAAACAGGCATCCGGGGCGTAATAAAAAAGTAATCAAGCGCCCTCCCAAACCACTCCTGGCCAGTCAGCTTCCCAACACTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2625563/140‑1 (MQ=255) agcTTTATCGCTATTTCAAAGAAAACCTGCACCAGGGGCTTATTCAAAAAGGAATGAAGCGCCCTTCCAAAAGACTCCGGGCGAGACAGCTTTCCACACGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:747953/140‑1 (MQ=255) agcTTTATCGCTATTACAACCAAAACATCCATCCGGGGCTTATCAAAAAAGGAATGACGCTCCCTTCCAAACCACTCCGGGCGAGACCGGTTCCAAACCGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:3598056/140‑1 (MQ=255) agcTTTATCGCTATTACAAAGAAAACCTGCATCCGGGGCTTTTACAAAAAGCAATGAAGCTCCCTTCCAAAAGACCCCGGGCGAGTCAGCTTCCCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1114230/140‑1 (MQ=255) agcTTTATCGATATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGTAATGACGCTCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCAACCGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:2758625/140‑1 (MQ=255) agcTTTAGCGATATTTCAACCAAAAAATCCATCAGGGGCTTATACAAAAAGCAATGAAGCGCCATTCCACACCACGCCTGGCGAGTCACGTTACCAACAGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:873434/140‑1 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg > 1:4240041/1‑140 (MQ=255) cTTTATCGCTTTTTCAAAGAAAACATGCATCCGGGGGGTATTCAAACAGGAATGACGCTCCCTTCCAACAGACTCCGGGGGAGTCAGGTTTCCACCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1240420/140‑1 (MQ=255) cTTTATCGCTATTTCAACTAAAACATGCATCAGGGGCGTATTCAAAAAGGATTGACGCTCCCTTCCAAAAGACGCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1987482/140‑1 (MQ=255) cTTTATCGCTATTTAAAAGAAAACATGCATCCGGGGGGTATTCAAAAAGGAATGAAGCTCCCTACCAAAAGACTCCGGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1555422/140‑1 (MQ=255) tctctttttCAAATAAAAACTGCATCTGGGGCTTTTTAAAAATGCAATGACGCGCCCTGCCAAACCACTCCTGGCGATTCTGCTTGCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 2:6910341/134‑1 (MQ=255) tCGATATTAAAAACAAAAAATGCATCCGGGGCTTATTAAAAAAGTAATGAAGCTCCCTTCCAAAACCCTCCGGGCTCGTCAGCTTGCCAACAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 1:673927/140‑1 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc > 2:343823/1‑86 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 1:7291374/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:879207/1‑140 (MQ=255) actcaaaCAGCCATCCGGGGGGTATCAAACAAGTAAGGAAGCCCCCTTCCAAAATACTCCTGGCTATAACGCTTTCCTTCATTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:2847680/136‑1 (MQ=255) aataaaaCATGCATCCGGGGGGTATTCAAAAAGGAATTAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCAATCTGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 2:465513/137‑1 (MQ=255) aaGAAAACATGCATCAGGGGCTTATTCAAAAAGTAATGAAGCGCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 2:4098620/140‑1 (MQ=255) aaGAAAACAGGCATCCGGGGCTTATTCAAAAAGGAATGAAGCTCCCTGCCAAACGACTCGTGGGGAGTCAGCTTGCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATCTCGTGAGc < 2:7683766/140‑1 (MQ=255) aGAAAACATGCAGCCGGGGGTTATTCAAAAATTAATGAAGCCCCCTTCCAAAAGACTCGGGGCGAGTAAGCTTTCCATCAGAAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCa < 1:103870/140‑1 (MQ=255) aaCATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGcc > 1:1430840/1‑140 (MQ=255) gggCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATg > 1:6682922/1‑140 (MQ=255) tATTCAAAACGCAATGAAGCTCCCTTCAAAAAGCCTCCTGGCGAGTCAGCTTTCCACCATTAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg < 1:520752/140‑1 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:6411687/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:6083557/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTAGATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:4042748/1‑140 (MQ=255) ttCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCt > 1:7544466/1‑140 (MQ=255) aaaacGGAATGAAGCTCCCTTCCAAACGACTCCGGGCGAGTCTGCTTTCCAACAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt < 1:4906776/140‑1 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 2:1700763/1‑140 (MQ=255) aGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATc < 2:6548352/140‑1 (MQ=255) aGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATc < 1:5995345/140‑1 (MQ=255) gAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 2:2234849/1‑50 (MQ=255) aaTGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATg > 2:4316189/1‑140 (MQ=255) tGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGAt > 1:2436804/1‑140 (MQ=255) acgcccccTTCCAAACGACTCCGGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTc < 1:4674681/135‑1 (MQ=255) cccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAAc < 2:2999923/45‑1 (MQ=255) cccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAAc > 1:2999923/1‑45 (MQ=255) cccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTCTATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCctgattctgatt > 2:5814010/1‑140 (MQ=255) ccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAttt > 1:5579163/1‑140 (MQ=255) ccAAACGACTCCGGGCCAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCg < 2:6271544/140‑1 (MQ=255) ccAAAAGCCGCCTGGCGAGTAAGCTTTCCAAACGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCg < 2:7267681/140‑1 (MQ=255) aaaaGACTCGTGGCTTGTCAGCTTTCCATCTGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa < 1:456917/140‑1 (MQ=255) ccTCCGGGCGAGTCAGGTTTCCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTa < 1:2238958/139‑1 (MQ=255) tCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaaa > 1:5410660/1‑140 (MQ=255) tCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTCCCTATGAACAGCTTGCTGCTGTGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGAGTCTGATTTTGCGTATCGGaaa > 2:2813525/1‑140 (MQ=255) ccTGGCGAGTCAGCTTTCAATCAGTCAAACGACTGTAGAACGTGACTAGGAACAGCTGGCTGATGAGGGCTATATCGTGAGCAAGCCAAGAATCTGATGGTTTGATGATTATCATGATTCTGATATTGCGTATCGTaaaa > 1:2223635/1‑140 (MQ=255) cTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAAt > 1:6846348/1‑140 (MQ=255) tGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATa > 1:6478553/1‑140 (MQ=255) tGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATa > 1:2096017/1‑140 (MQ=255) tGGCGAGTCAGCTTTCCATCAGTAAAACGACTGTAGAACGTGCCTATGAACAGATTGCTGCTGAGGGCTATATAGTCAGCAAGCCAAGAATCGGATTGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATa > 1:575920/1‑140 (MQ=255) | ACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATA > NZ_CP034943/548980‑549258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |