| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 549,144 | A→C | 16.3% | Q52H (CAA→CAC) | EO946_RS02865 → | PLP‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 549,144 | 0 | A | C | 16.3% | 796.3 / 41.7 | 399 | Q52H (CAA→CAC) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base A (177/140); new base C (2/80); total (179/220) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.51e-21 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 412 total aligned reads displayed.
TTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCAA > NZ_CP034943/549005‑549279 | ttttAATATAATTCTGTAATTTCCGCTTTATCAGCAGCTTTATCGATATTTCAAACAAAACATGCATCCGGGGCGTATAAAAAAAGTAATGAAGCTCCCTTCAAAAACACGCCTGGCGAGTCACCTTTCCATCAGTCaaa < 2:6322255/140‑1 (MQ=255) ttttAATAGAAATCTGTATATTCGGCTTTATCAGCAGCTTTATCGCTATTTCAAATAAAACATGCATCAGGGGGGTATTCAAAAAGGAATGAAGCCCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGACaaa < 2:425531/140‑1 (MQ=255) tttGAATAGAAATCTGTATATTCCGTTTTATCAGCAGCTTTATCGATTTTTCAAAGAAAACATGCATCAGGGGGGTATTAAAAATGGAATGAAGCTCCCTACCAAAACACTCCGGGCGAGTCAGCTTTCCATCCGACaaa < 2:4346715/140‑1 (MQ=255) tttaaTATAAATGTGTATATTCCGCTTTATCAGCAGCTTTATCGATATTTCAAATAAAACATGCATCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCATCCGTCacac < 2:2583614/137‑1 (MQ=255) tAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTg > 2:1578025/1‑140 (MQ=255) gtgtatatTCCGATTTATCAGCAGCTTTATCGATATTTCAAACAAAACATGCATCCGGGGCTTATTCAAAAAGCAATGAAGCTCCCTTCCAAAACACCCCGGGCGACTCAGCTTACCATCAGACACACGACTGTAGAACg < 1:1516346/136‑1 (MQ=255) gtGGATTTTCCGCTTTATCAGCAGCTTTATCGCTTTTTCAAATAAAACATGCATCCGGGGCGTATTAAAAAAGGAATGAAGCGCCGTTCCAAACGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACg < 2:407589/139‑1 (MQ=255) cgggATATTCCTCTTTATCAGAAGCTTTATCGATATTAAAAATAAAACATGAATCCGGGGCTTATACAAAAAGTAATGAAGCTCCCTTCAAAAACACTCCGGGCGAGTAAGCTTTCCATCAGTCAAACGACTGTAGAACg < 1:242746/138‑1 (MQ=255) cggcatatTCCGGTTTATCAGCAGCTTTATCGTTTTTTCAAATAAAACATGCATCCGGGGGGTTTTCAAAAAGCAATGAAGCTCCATTCAAAAACACTCCTGGCGAGTCCGCTTCCCATCAGGCACACGACTGTAGAACg < 1:4113469/136‑1 (MQ=255) cTGTATATTCCGATTTATCAGCAGATTTATCGATATTACAAAAAAAACATGCATCCGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACg < 1:439929/140‑1 (MQ=255) cTGTATATCCCGCTTTATCAGCAGCTTTATCGATATTTCAAACAAAACATGAATCAGGGGCTTATTCAAAAAGTAATGAAGCTCCCTTCCAAAACACTCGTGGCGAGTCAGCTTTCCAACCGTCAAACGACTGTAGAACg < 2:6121186/140‑1 (MQ=255) tatTCCTCTTTATCAGAATCTTTTTCTCTATTTAAAATAAAAAATGCATCTGGGGCTTATACAAAAAGTAATGAAGCTCCCTTCAAAAAGACTCCTGGGTAGTCAGTTTTCCATAAGTCAAACGACTGTAGAACGTGCCt < 2:1026144/140‑1 (MQ=255) atTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTa > 1:2262652/1‑140 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAATAAGGAATGAAGCTCCCTTCCAAAAGAGTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 1:6051325/1‑140 (MQ=255) cgatttATCAGCAGCTTTATCGATATTACAAACAAAACATGCATCAGGGGCTTATAAAAAAAGGAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGACAAACGACTGTAGAACGTGCCTATGaa < 2:3610405/137‑1 (MQ=255) cGCTTAATCACCAGTTTTATCGCTTTTTAAAACAAAACTTGAATCAGGGCCGTTTACAAAAAGGAAGGAAGCTCCCTTCCAAAACACCCCGGGCGAGACTGATTACAAACAGACCCACGACTGTAGAACGTGCCTATGac < 1:3644757/140‑2 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 1:5655595/1‑140 (MQ=255) tacccgcagcTCTATCCCTATTACAAACACAACATCCAACCGGGGCGTATACAAAACGCAAGGAACCGCCCTTCAAAACGACTCCTGGCGAGTAAGCTTGCCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCt < 2:512577/135‑1 (MQ=255) tATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCt > 2:3320748/1‑140 (MQ=255) tATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAATAAAAAGCCTTTAGAACGTTCCTTTGAAAAGCt > 1:844652/1‑140 (MQ=255) tcatcaGCTTTATCGATATTTAAAATAAAACAGCCATCCGGGGCGTATAAAAAAAGGACTGAAGCTCCCTTCCAAACCACCCCGGGCGAGTCAGTTTACCATCCGTCACACGACTGTAGAACGTGCCTATGAACAGCTtg < 1:4264569/140‑1 (MQ=255) gcagcTTTATCGCTCTTTCAAAGAAAACATGCATCAGGGGCGGATGCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCGTTCCATCAGTCAAACGACTGTAGCACGTGCCTCGGAGCAGCTtgctg > 2:4534994/1‑140 (MQ=255) cagcTTTAGCGATATTACAAACAAAACATGCAACAGGGGCGTATTAAAAAAGAAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTAAGCTTTCCAACAGACACACGACTGTAGAACGTGCCTATGAACAGCTtgctgc < 2:186755/140‑1 (MQ=255) tgatttATCGCTATTCAAAATAAAACATGCAGCCGGGGCGTATTAAAAAAGTAATGACGCGCCGTTCAAAAACACGCGGGGCGTGTCAGCTTTCCCTCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2020513/137‑1 (MQ=255) atcTTTATCGCTATTTCAAATAAAACAGGCTTCTGGGGCTTATTCAAAAAGTAATTAAGCTCCCTTCCAAAAGCCTCCTGGCGAGTCAGCTTTCCAACAGTAAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1965920/138‑1 (MQ=255) agcTTTCTCCATATTTCAAAGAAAACATGCAGCCGGGGCGTATGCAACAAGCAAGGAAGCTCCCTACCAAAACACCCCTGGCGAGACAGCTTTCCAACAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:110646/140‑1 (MQ=255) agcTTTATCGCTATTTCAAAGAAAACCTGCACCAGGGGCTTATTCAAAAAGGAATGAAGCGCCCTTCCAAAAGACTCCGGGCGAGACAGCTTTCCACACGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:747953/140‑1 (MQ=255) agcTTTATCGCTATTTCAAACAAAACATGCATCAGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1468248/140‑1 (MQ=255) agcTTTATCGCTATTACAACCAAAACATCCATCCGGGGCTTATCAAAAAAGGAATGACGCTCCCTTCCAAACCACTCCGGGCGAGACCGGTTCCAAACCGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:3598056/140‑1 (MQ=255) agcTTTATCGATTTTTCAAAGAAAACATGCATCCGGGGCTTATTAAAAACGTAATGACGCTCCATCCCAAAACACTCCTGGCGCGTCAGCTTTCCATCCGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:3767055/140‑1 (MQ=255) agcTTTATCGATATTACAAACAAAACATGCATCCGGGGCGTATTCAAAAAGCAACGAAGCTCCCTTCCAAAACACTCCGGGCGAGTCAGCTTTCCAACAGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:6227565/140‑1 (MQ=255) agcTTTAGCGCTTTTACAAACAAACCATGCATCAGGGCCGTATTCAAAAAGGAATGAAGCTCCCTTCCACAAGACGCCGGGGGAGTCAGCTTGCCATCCGCCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1803246/140‑1 (MQ=255) agcTTTAGCGATATTTCAAACAAAACATCCATCCGGGGCTTATAAAAAAAGGATTGAACCCCCCTACCAAACGCCGCGGGGCGAGTCAGCTTCCCACCCGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2551998/140‑1 (MQ=255) agcTTTACCGCTATTTCAATCACACCCTGCAGCCGGGGCGAATCCAAAACGCAATGAAGCTCCCTTCCAACAGACTCCTGGCCAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:5831601/140‑1 (MQ=255) agcTTAATCGATATTACAAATAAAAAATGCACCAGGGGCGTATTCAAAAAGGAATGACGCGCCCTTCAAAAAGACTCCGGGCGAGTCAGCTTTCAATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:761548/140‑1 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGTCGAGTCAGCTTTCCATAAGTCAAACGACTGTATAACGTGCATATGAACAGCTTGctgctg > 1:5298146/1‑140 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg > 1:5435433/1‑140 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg > 1:2673890/1‑140 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg > 1:2737100/1‑140 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg > 1:6631459/1‑140 (MQ=255) ttttATCGATATTTCAAAGAAAACCTGAATCTGGGGCTTATTCAAAATGGAATCACGCTCCCTTCCAAAAGACTCCGGGCGATTCAGCTTTCCAACAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:1321369/139‑1 (MQ=255) ttttATCGATATTAAAAACAAAACCTCCATCGGGGGCGTATTCAAAACGGACTCACGCTCCCTACAAAACCACTGGGGGCGATTCAGCTCACCAACAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:1186541/139‑1 (MQ=255) cattAGCGCTCATTCAACCAAAACATCCATCCGGGGCGTCCTCAAAAACCAAAGAAGCTCCATTCCAACAGACCCCTGCCGAGGCAGCTTGCCATCACAAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:4005487/138‑1 (MQ=255) cTTTATCTCAATATCAAAGAAAACAGCAATCCGGGGGTTATAAAAAAACGAATGAAGCTCCCTTCCAAACGACCCCTGGCGAGTCAGCTTTCCATCAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:6427796/140‑1 (MQ=255) cTTTATCGCTTTTTCAAAGAAAACATGCATCCGGGGGGTATTCAAACAGGAATGACGCTCCCTTCCAACAGACTCCGGGGGAGTCAGGTTTCCACCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1240420/140‑1 (MQ=255) cTTTATCGCTATTTAAAAGAAAACTGGAATCCGGGGCTTTTTAAAAAAGGAATGACGCTCCCTCCAAAAACACGCCTGGCGAGCCAGCTTTCCCCCCGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:7514633/140‑1 (MQ=255) cTTTATCGCTATTTAAAAGAAAACATGCATCCGGGGCTTATTAAAAAAGGAATGACGCTCCCTTCCAAACCACGCCGGGCGAGTCAGCTTTCCATCCGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:872756/140‑1 (MQ=255) cTTTATCGCTATTAAAAACAAAACATCCATCCGGGGCTTTTAAAAAAAGGATTGAAGCGCCCTTCCAAAAGACCCCGGGCGAGTCAGCTTGCCACCAGGCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:3054535/140‑1 (MQ=255) aTCGCATTTTAAAACAAAACATGCACCCGGGGCTTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGACACACGACTGTAGAACGTGCCTATGACCAGCTTGCTGCTGAGGGc < 2:3159073/140‑1 (MQ=255) tCGCTATTTAAAACAAAACATGCATCGGGGGCTTATTCAAAAAGTAATGACGCTCCCTCCCAACCCACACCTGGCGCGTCTGCTTTCCACCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 2:7019887/140‑1 (MQ=255) tCGCTATTACAAAGAAAACATGCATCCGGGGCGTATTAAAACAGTAATGAAGCGCCCTTCCAAAAGACGCCGGGCGAGTCAGCTTTCCACCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 1:7023699/140‑1 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 1:7545896/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTGCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACCGCTTGCTGCTGAGGGCtatagc > 2:3906403/1‑138 (MQ=255) aataaaaCATGCATCCGGGGGGTATTCAAAAAGGAATTAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCAATCTGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 2:465513/137‑1 (MQ=255) aGAAAACATGCAGCCGGGGGTTATTCAAAAATTAATGAAGCCCCCTTCCAAAAGACTCGGGGCGAGTAAGCTTTCCATCAGAAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCa < 1:103870/140‑1 (MQ=255) aaCATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGcc > 1:1903067/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCACGAAGCGGATGGTTTg > 1:3248701/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:5608667/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:4781080/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:344020/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:5070483/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:3047112/1‑140 (MQ=255) aaaaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt > 2:4607066/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 1:2134934/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 2:2778559/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 2:1700763/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 1:6701395/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAGTa > 1:4547923/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAAAGAGTGTAGAACTTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAGTa > 1:7372258/1‑140 (MQ=255) aGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATc < 2:6548352/140‑1 (MQ=255) acgcccccTTCCAAACGACTCCGGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTc < 1:4674681/135‑1 (MQ=255) aGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCt > 2:6689756/1‑140 (MQ=255) cTCCCTTCCAAAAGACTCCTGGAGAGTCAGCTTTCCATCAGTCAATCGACTGTAGAACGTGCCTAGGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGGTTGCTGATTATCATGATTCTGa > 1:6121483/1‑140 (MQ=255) cccTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTCTGAACAGCTTGCTGCGGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGAGGGTTTGCTGATTCTCATGATTCTGagt > 1:7190714/1‑138 (MQ=255) ccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAttt > 1:6739749/1‑140 (MQ=255) ccAAACCACGCCGGGCGAGTCAGGTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCg < 2:2444636/140‑1 (MQ=255) tCCTGGCGAGTCAGCTTTCCATCAGTCAATCGACTGTAGACCGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTGTGATTTTGCGTATCGTaaa > 2:2026856/1‑140 (MQ=255) tCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGGCTATGACCAGCTTGCTGGTGAGGGCGCTAGCGTGAGCCCGCCAAGACGCGGATGGTGTGGTGTTTCTCATGATTCTGATTTTGCGGAGCGTaat > 1:6399168/1‑139 (MQ=255) tCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGACCAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGAGGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaaa > 2:5448051/1‑140 (MQ=255) tCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaaa > 2:4193829/1‑140 (MQ=255) ccTGGCGAGTCAGCTTTCAATCAGTCAAACGACTGTAGAACGTGACTAGGAACAGCTGGCTGATGAGGGCTATATCGTGAGCAAGCCAAGAATCTGATGGTTTGATGATTATCATGATTCTGATATTGCGTATCGTaaaa > 1:2223635/1‑140 (MQ=255) tGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATa > 1:6478553/1‑140 (MQ=255) tGGCGAGTCAGCTTTCCATCAGTAAAACGACTGTAGAACGTGCCTATGAACAGATTGCTGCTGAGGGCTATATAGTCAGCAAGCCAAGAATCGGATTGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATa > 1:575920/1‑140 (MQ=255) gcgtttCAGCTTTCCATCAGCAACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATAcc < 2:2134934/135‑1 (MQ=255) gCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATAcc < 1:344020/140‑1 (MQ=255) gCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATAcc < 1:7293849/140‑1 (MQ=255) ctaGTCTGGTTTCCTTCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCa < 2:2976941/138‑1 (MQ=255) gTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAgc > 1:86312/1‑140 (MQ=255) tCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAgcg > 2:2729627/1‑140 (MQ=255) tCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAgcg > 1:5951807/1‑140 (MQ=255) tCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAgcg > 2:7266114/1‑140 (MQ=255) tCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAgcg > 2:6183186/1‑140 (MQ=255) aGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCa > 2:2877474/1‑140 (MQ=255) cATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCaa > 2:7367680/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 2:6787752/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 2:7108445/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 2:5934976/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 1:4013236/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 2:5227057/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGGATCGTAAAATACCAAGAGCATCACCAAGTCaa > 2:4722654/1‑140 (MQ=255) | TTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCAA > NZ_CP034943/549005‑549279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |