BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,494	A→C	5.4%	T113P (ACC→CCC)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,494	0	A	C	5.4%	866.2 / 7.0	362	T113P (ACC→CCC)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base A (138/186); new base C (16/16); total (158/204)
Fisher's exact test for biased strand distribution p-value = 4.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 369 total aligned reads displayed.

ACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGG  >  NZ_CP034943/607355‑607633

cccaCCCGGCCCGACGGGCGCCCCCGTAGCTTCCGGGGACGCGGGTCCTGCGGTCCGAACCGGCGCCACAGGAGCGACAGGCGCTACGGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGAGCTa                                                                                                                                             <  1:2501/139‑1 (MQ=9)

     ccgccgCGACGGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGCCAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCggg                                                                                                                                        <  1:3556340/135‑1 (MQ=255)

     ccGGAGCGACGGGAGCCACGGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCTACAGGAGATCCCGGGGAAGCCGGACCACCCGGAGCGAGAGGAGCGACAGGAGCGACAGGAGCTCCCggg                                                                                                                                        >  1:6759442/1‑140 (MQ=14)

     ccGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGCGCGACAGGAGCTACCggg                                                                                                                                        >  1:2415626/1‑140 (MQ=255)

     ccGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCggg                                                                                                                                        >  1:6530067/1‑140 (MQ=255)

         aGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                    >  1:4558650/1‑140 (MQ=255)

         aGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                    >  1:7097065/1‑140 (MQ=255)

               gggAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGAc                                                                                                                              <  2:7409866/140‑1 (MQ=255)

                       cGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGa                                                                                                                      >  1:13315/1‑140 (MQ=255)

                        gggAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAg                                                                                                                     >  1:5270948/1‑140 (MQ=255)

                               cccGGTGCAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACggg                                                                                                              <  2:2674002/139‑1 (MQ=255)

                               aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCTGGACCAGCTGGAGCGACggg                                                                                                              >  1:6109528/1‑140 (MQ=255)

                               aCCGGGGAACCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCGAGTGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACggg                                                                                                              <  2:4967885/140‑1 (MQ=14)

                                 cGGGGATGCCGGACCCGCCCGACCACCCCGAGCGACAGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCTACCGGAGCGACAGGAGCGACCGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAg                                                                                                            <  2:6272332/140‑1 (MQ=11)

                                 cGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAg                                                                                                            <  2:6278473/140‑1 (MQ=255)

                                  ggggACGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACggg                                                                                                              <  1:4351431/137‑1 (MQ=255)

                                  ggggAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACggg                                                                                                              <  1:325080/137‑1 (MQ=255)

                                  ggcgAAGCCGGAGCAGCCGGACCACCCGGCGCGACAGGAGCGACCGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGc                                                                                                           <  2:3523347/137‑1 (MQ=14)

                                    ggAAGCCGGACCAGCCGGACCCACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACggg                                                                                                              <  2:7293733/135‑1 (MQ=255)

                                    ggAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGa                                                                                                         <  2:1155288/140‑1 (MQ=255)

                                     gAAGCCGTTCGAGCTGTAGCACCCGGCGCGATAGGAGAGACATGAGATACCGGGGAAGACTGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                                                                                                        <  1:4143925/140‑1 (MQ=17)

                                     gAAGCCGGACCTGGCGGACCAACCGGCGGGACTTGAGAGACAGGACCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                                                                                                        <  1:1007336/140‑1 (MQ=17)

                                     gAAGCCGGACCAGCCGGACGCCCCGGAGCGACAGGAGCGACAGGTGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGCGCGACAGGAGCGAAAGGAGCTACCGGGGAAGCTGGACCAGCtggagcgactggagcgac                                                                                                        <  2:2118176/140‑1 (MQ=17)

                                     gAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGTGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                                                                                                        <  2:4129072/140‑1 (MQ=255)

                                     gAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                                                                                                        <  2:1678452/140‑1 (MQ=255)

                                      aaGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACa                                                                                                       >  1:6874190/1‑140 (MQ=255)

                                      aaGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACa                                                                                                       <  1:3646861/140‑1 (MQ=255)

                                        gccggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGAGCGACAGGAGCTGCCGGGGACGCAGGACCAGCAGGAGCGACGGGAGCggccgg                                                                                                     >  1:1463544/1‑135 (MQ=14)

                                        gccggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAgg                                                                                                     <  2:13315/140‑1 (MQ=255)

                                        cccggcccagccggaccaCCCGGCGCGACCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCCGGAGCGACTGGAGCCACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAgg                                                                                                     <  1:2803263/139‑1 (MQ=14)

                                         ccggaccagccggaccaACCGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGa                                                                                                    <  2:5601132/140‑1 (MQ=255)

                                                 gccggaccaACCGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCgg                                                                                            <  2:4460132/140‑1 (MQ=255)

                                                  ccggcccaCCCGGAGGGACAGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACCGGCGCGACAGGCGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCggg                                                                                           <  1:5880797/140‑1 (MQ=17)

                                                  ccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCggg                                                                                           >  1:6389856/1‑140 (MQ=255)

                                                      accaccCGGAGCGACAGGAGCGCCCGGAGCTACCGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAg                                                                                       <  1:4028693/140‑1 (MQ=255)

                                                      accaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGCGCAACCGCACATACCCACGACTCAGGACCACCTGGACCCACCGGAGAGACGGGAGCTCCCGGGGacg                                                                                       >  1:4930358/1‑138 (MQ=9)

                                                       ccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGGGCGACAGGAGCGACCGGGGCAGCTGGACCTCCCGGTGCCACGGGACCAACAGGCGCTACCGGGGACGc                                                                                      >  2:339039/1‑140 (MQ=17)

                                                          aCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCgg                                                                                   >  1:297929/1‑140 (MQ=255)

                                                           ccGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                  <  1:5707246/140‑1 (MQ=255)

                                                           ccGGACCGCAAGGAGCCAAAGGAGCTACCGGCCCAGCCGGACCACCCGGAGCGACAGGAGCCAGAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACTGGAGCGACTGGAGCTACGGGGGAAGCCGGa                                                                                  <  1:5927338/140‑1 (MQ=14)

                                                                 cgaccggagcgacaggagCTACCGGCGACGCCGGACCAGCCGGACCCACAGGAGCCCCAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                            <  1:6597183/140‑1 (MQ=17)

                                                                 cgacaggagcgccaggagCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                            <  1:2224252/140‑1 (MQ=255)

                                                                 cgacaggagcgacaggagGTCCCGGCGCAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                            <  1:1117554/140‑1 (MQ=17)

                                                                   acaggagcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGCGCTACCGGGGAACCTCGCCAAGCTGGTGCGACGGGAGCCACAGGCGCGACCGGTGCCGCCGGAGCAGCCgg                                                                          >  1:976472/1‑140 (MQ=17)

                                                                   acaggagcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCTGGACCAGCTGGAGCTACCGGTGCCACAGGAGCGACCGGGGAAGACGGAGCAGCCgg                                                                          >  2:3854040/1‑140 (MQ=17)

                                                                   acaggagcgacaggagcTACAGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACAGGCGCGACAGGTCCAACCGGCGAAGCTGGAGCCACAGGAGCTACGGGAGAGCCCGGCGGGACCGGCGACCCCGGACCACCCgg                                                                          >  1:3334138/1‑140 (MQ=12)

                                                                          cgacaggagaTACAGGGGCAGCCGGACCAGGCGGAGCGACTGGAGCGACAGGAGCGACAGGTGCTAACGGGTAAGCTGGACCTGCTGGAGCGACTGGAGCGACAGGTGCTACCGGGGAAGCCGGACCAGCCGGGGCCagg                                                                   <  2:7131424/140‑3 (MQ=18)

                                                                           gacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACgg                                                                  <  1:7310622/140‑1 (MQ=255)

                                                                            accggagcGACGGGGGAAGCCGGACCAGCCGGAGCCACAGGAGCCACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                 <  1:7414754/137‑1 (MQ=18)

                                                                            acaggagcTCCCGGGGAAGCCGGCCCAGCCGGTGCGACAGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCTGGACCCGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                 <  1:1729055/140‑1 (MQ=18)

                                                                            acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                 <  1:1256061/140‑1 (MQ=255)

                                                                            acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                 <  1:7010013/140‑1 (MQ=255)

                                                                                  gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAGAGGAGCGACAGGAGCAACCGGGGACGCTGGACCACCTGGAGAGACGGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACCGGAGCcac                                                           >  1:3955003/1‑140 (MQ=18)

                                                                                  gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                           >  1:6450916/1‑140 (MQ=255)

                                                                                  gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                           <  1:4783274/140‑1 (MQ=255)

                                                                                  gcTACCGGGGAAGCCAGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                           >  1:4277228/1‑140 (MQ=255)

                                                                                   ctcccGGTGAAGCCGGACCAGCCGCACCCACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                          <  2:6126081/137‑1 (MQ=18)

                                                                                   cgcccGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                          <  1:747654/137‑1 (MQ=255)

                                                                                     aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                        >  1:2128754/1‑140 (MQ=255)

                                                                                       cGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGCGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgggg                                                      <  1:4685736/140‑1 (MQ=255)

                                                                                       cGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgggg                                                      <  1:1980698/140‑1 (MQ=255)

                                                                                       cGGGGAAGCCGGACCAGCCGGACCGACAGGAGCGACAGCAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgggg                                                      <  1:3916610/140‑1 (MQ=255)

                                                                                          gtaaGCCGGACCAGCCGGAGCGACATGAGCGACAGGAGCGACTGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                                                   <  1:6322776/138‑1 (MQ=255)

                                                                                          ggcctcaggACCACCCGGAGCGCCAGGAGCTACAGGACCTACAGGACCTCCCGGGCAAGCAGGACGCGCGGGAGCCACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                                                   <  2:894171/133‑1 (MQ=18)

                                                                                          ggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                                                   >  1:5990153/1‑140 (MQ=255)

                                                                                           gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCt                                                                                                                         <  1:4622365/69‑1 (MQ=255)

                                                                                            aaGCCGGACCAGCCGGAGCGACAGGAGCGACCGGAGCGACAGGAGCTCCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGCGCCCCAGGGGCtccg                                                 >  1:6693866/1‑137 (MQ=18)

                                                                                            aaGCCGGACCAGCCGGAGCGACAGGAGCGACCGGAGCGACAGGAGCGCCCGCCGACGCTGGACCAGCTGGAGCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGcggcg                                                 >  1:791859/1‑136 (MQ=21)

                                                                                              gCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGCGCTACCGGGGACGCGGGACCAGCGGGAGCGACGGGAGCGACAGGAGCACCCGGCGCAACCGGAGCCGCCGGGGCCACGGGCGCCCCTGGGGcgggggg                                               >  2:2210158/1‑134 (MQ=17)

                                                                                              gCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                          <  2:4710666/129‑1 (MQ=255)

                                                                                              gCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                           >  2:2826595/1‑128 (MQ=255)

                                                                                                cGGACCAGCCGGAGCGACAGGAGAGACAGGAGCGACCGGAGATACCGGTGAACCTGGACCAGCTGGAGCGACGGGAGAGACAGGAGCTACCGGGGAAGCCGGACCAGACGGTGCCACGGGAGAAACAGGGGCGACGgggg                                             >  2:1397703/1‑140 (MQ=18)

                                                                                                   aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                                          <  1:4192164/140‑1 (MQ=255)

                                                                                                        ccGGAGCGACAGGAGCGACCGGAGCCACAGGCCCACCCGGCGCAGCGTGAGCAGAGGCAGCGACGGGATCGACCGGGGCTCGAGGCCAAGACGGACCCTGCGGCGCCACGGGAGCGAGTGGGGCTCCGGGGGCGGCCggg                                     >  2:4583955/1‑139 (MQ=255)

                                                                                                        ccGGAGCGACAGGAGCGACAGGAGCGACAGGATCTACCGGTGAAGCATGACCAGCCGGAGCGACGGGACCGACAGGAGCTACCGGGGAAGCCGGAGCAGCCGGGGCGACGGGAGCGCCGGGGGCTGCGGGGGAcggcggg                                     >  1:314876/1‑139 (MQ=17)

                                                                                                        ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGa                                     <  2:6530067/140‑1 (MQ=255)

                                                                                                         ctgagagacaggagcaaaaggagctgcagGAGCAAAAGGTCAAGATGGACTGCCTGGAGTCACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACCGGAGCCACTGGGGCTACTGGGGAAGCCGGAc                                    <  1:5355707/138‑1 (MQ=9)

                                                                                                            agcgacaggagcgacaggagcgacaggAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGCCGCCGGACCAg                                 >  2:5655614/1‑140 (MQ=255)

                                                                                                             gcgacaggagcgacaggagcgacaggaGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGc                                >  1:7195890/1‑140 (MQ=255)

                                                                                                                 caggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGa                            >  2:1625376/1‑140 (MQ=255)

                                                                                                                 caggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGCGCACTGGGCACGCCGGCCCTGCCgcc                            >  2:3920969/1‑138 (MQ=18)

                                                                                                                  cggcgcgaccggagcgacaggcccCCCCGGCGCAGCGGGACCACCTGGAGCGACGGGAGCGACCGGAGATCCCGGGGAAGCCGGACCAGCCGGGGCGACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAg                           <  2:3028596/136‑1 (MQ=17)

                                                                                                                  aggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCGTGGGGAAGCCGGACCAGCCGGAg                           >  2:2499352/1‑140 (MQ=255)

                                                                                                                  aggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAg                           >  2:662898/1‑140 (MQ=255)

                                                                                                                  aggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGATACCGGGGCAGCCGGACCAGCCGGGCCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGCGCAGCCGGAg                           >  2:2048313/1‑140 (MQ=18)

                                                                                                                      gcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                           >  1:704244/1‑104 (MQ=255)

                                                                                                                       cgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCTGGGGAAGCCGGACCAGCCGGAGCGACa                      >  1:5045538/1‑140 (MQ=255)

                                                                                                                         ccccgcgcgacaggatcTTCCGGGGTATCGCGCCCAGGGGGAGCGACGGGTGCGCCCGGAGATACAGGGGCAGCCGGACCCGCCGGCGCGAGGGGAGCCTCAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAgg                    <  2:1474404/134‑1 (MQ=9)

                                                                                                                         ccaggaccgacaggcgcTCCAGGTCTACCTGGACCGGCGGGAGCCACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCTGCCGGGGCCACGGGAGCCACAGGGGATACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                    <  1:1635675/139‑1 (MQ=17)

                                                                                                                         acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                    >  1:6632955/1‑140 (MQ=255)

                                                                                                                         acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                    <  2:701388/140‑1 (MQ=255)

                                                                                                                           aggagcgacaggagcTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                  <  1:1770254/140‑1 (MQ=255)

                                                                                                                           agctgcgacaggagcTACCGGTGAACCGGGACCATCTGCAGCGACGGTAGCTACAGGAGCTACCGGGGAACCCGGACCAGCCGGCGCCAGGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCACCCGGAGCGACAGGAg                  <  2:4011753/136‑1 (MQ=18)

                                                                                                                            ggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCAc                                                                    >  1:2328914/1‑89 (MQ=255)

                                                                                                                                 gacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCTACCg            >  2:1811397/1‑140 (MQ=255)

                                                                                                                                 gacaggagcTACCGGGGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCCACGGGAGCCACAGGGGCTACAGGAGAAGGCGTACCAGCAGCAGCGAATGGAGCTaact            >  2:5468293/1‑137 (MQ=17)

                                                                                                                                  acaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg           >  1:3494546/1‑140 (MQ=255)

                                                                                                                                   ccggagcCCCCGGCCAAGCTGGCCCAGCTGGAGCGACGGGAGCGACCGGAGCCACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTCCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg          <  2:424441/138‑1 (MQ=18)

                                                                                                                                       agcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCAACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGacg      >  2:3242382/1‑138 (MQ=255)

                                                                                                                                           aCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg  >  2:4921958/1‑140 (MQ=255)

ACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGG  >  NZ_CP034943/607355‑607633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`