| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 68,857 | G→T | 5.1% | intergenic (+16/‑2) | yabQ → / → divIC | spore cortex biosynthesis protein YabQ/cell division protein DivIC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 68,857 | 0 | G | T | 5.1% | 1425.1 / 8.1 | 547 | intergenic (+16/‑2) | yabQ/divIC | spore cortex biosynthesis protein YabQ/cell division protein DivIC |
| Reads supporting (aligned to +/- strand): ref base G (264/229); new base T (2/52); total (266/281) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.21e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 549 total aligned reads displayed.
CTTCCTGTAAAGATGCGTCTAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGCCCTAGTATTC > NZ_CP034943/68719‑68996 | tAAAGATGCGTCTAACTTTTAGACGTTATTTTGAAAAAGTTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTTGTAACCATAATAACTACCATTACACGTTTTTTGAAGAGATGAAAGGATGACAGTCTGGTTTGAAtt > 1:4493476/1‑140 (MQ=255) cGTCTAACTTTTAGACGTTATTTTGAAAAATGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCaga > 1:596873/1‑140 (MQ=255) cGTCTAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCaga > 1:3934926/1‑140 (MQ=255) cGTCTAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCaga > 2:2261499/1‑140 (MQ=255) cGTCTAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCaga > 2:3709678/1‑140 (MQ=255) cGTCTAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGAACGTCTGGTTTGAATTTTTCCaga > 2:862292/1‑140 (MQ=255) gTCTAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCagag > 1:4373333/1‑140 (MQ=255) tCTAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAgaga > 1:525513/1‑140 (MQ=255) tCTAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAgaga > 1:477486/1‑140 (MQ=255) tAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGATAACCATAAGAACGACCATCACACGGTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGGgaac > 2:4862903/1‑140 (MQ=255) aaCTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAgaacg < 1:1772439/140‑1 (MQ=255) cTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTCCACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAgaacgaa > 2:4061256/1‑140 (MQ=255) ttAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAGCGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAacgaacga > 1:7626042/1‑140 (MQ=255) ttAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAacgaacga > 1:1011232/1‑140 (MQ=255) ttAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTGTGAATTTTTCCAGAGAacgaccga > 1:3976449/1‑140 (MQ=255) tAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGAt < 1:2528910/140‑1 (MQ=255) aGACGTTATTTTGAAAAAGGTGCAGGATTTGTCAAAAAGAAGAAGAACCTATTGGTAACCATAAGAACGACCATTCCACGTTTTTTGAAGAGGTGAAAGGCGGACCGTCTGGTTTGAATTTTTCCTGAGAACGAACGATa > 2:5182521/1‑140 (MQ=255) gTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTg > 2:1854280/1‑140 (MQ=255) ttATTTTGAAAAATGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACAATAACACGTTTTTTGAAGAGATGAAAGGAGGACCGTGTGGTTTGAATTTTTCCAGATAACGAACGATAACTGa < 1:5664323/140‑1 (MQ=255) tATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGaa > 1:5577250/1‑140 (MQ=255) aTTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACCATAACTGaaa < 1:2745331/140‑1 (MQ=255) agttGCAGGATTTCTAAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTCACGATATGAAAGTAGGACCGTGTTGTTTGAATTTTTCCCGAGAACGAACGATAACTGAAATACAAAACGa < 1:4894328/137‑1 (MQ=255) gCAGTATTTATCAAAAAGAATAAGAATCTATTGTTAACAATAAGAACGACAATTACACTTTTTTTGAATATATTAAAGTAGGACCGTCTGTTTTTAATTTTTCCAGTGAACGAACGATAACTGAAATACAAAACGACtat < 2:6642771/140‑1 (MQ=255) aGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAAGGAACGATAACTGAAATACAAAACGACTATaa < 2:3808596/140‑1 (MQ=255) aGGATTTACCATCAAGAAGAATAAACTATTGGTAACCATAAGAACGACCATTCCCCGTTTTTTGAATAGAGGAAAGGAGGACCGTCTGGTTTGAATTTTTCCACACAACGAACGATAACTGAAATACAAAACGACTATaa < 2:7089060/140‑1 (MQ=255) ttCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAAc > 2:4667302/1‑140 (MQ=255) tctcAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGTACCGTCTGTTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACa > 1:7166670/1‑140 (MQ=255) ctcAAAAAGAAGAAGAAACTATTGGTAACCATACGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATaactgtctc > 1:1394632/1‑133 (MQ=255) ctcAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACaa > 2:2638981/1‑140 (MQ=255) ctcAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACaa > 1:1223842/1‑140 (MQ=255) acAAAAAGAAGAAGAAACTTTTGGTAACCATAAGAACGACCATTAAACGTTTTTTTAAGACATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAg < 2:5104454/139‑1 (MQ=255) cTATTGGTAACCATTAGATCGACCATTACAGGTTTTTTGAAGATATGAAAGTAGGACCGTCTGTTTTGAATTTTTCCAGTGAACGAACTATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAg < 1:5088669/140‑1 (MQ=255) tATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAAAGACTATAAAGAACAATTAGAGCGGCAGAATCAGc > 1:4262839/1‑140 (MQ=255) tAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGaagaaaagaa > 1:5470846/1‑140 (MQ=255) tAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGaagaaaagaa > 2:7168444/1‑140 (MQ=255) aataaCTACAATTACACGTTTTTTGAAGAGATGAAAGTAGTACCGTCTGTTTTTAATTTTTCCAGACAACGAACGATACGTGAATTACAAAACGAATATAAAGAACAAGTAGAGCGGCAGAATCAGCTGaagaaaagacg < 2:656892/137‑3 (MQ=255) aaGAACTACAATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAaagaag < 2:1251198/140‑1 (MQ=255) aaGAACGACCTTTACAGGTTTTTTGAAGATATGAAAGGAGGACCGTGTGGTTTGAATTTTTCAAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAaagaag < 2:7615277/140‑1 (MQ=255) aaGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAaagaag < 2:4152214/140‑1 (MQ=255) ctaCCATTACACTTTTTTTGAAGAGATGAAAGGAGGACCTTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCa < 2:6173422/138‑1 (MQ=255) cGACCATTACACTTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGCACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCa < 2:2723051/140‑1 (MQ=255) cGACCATTACACGTTTTTTTAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCa < 2:1706880/140‑1 (MQ=255) cGACCATTACACGTTTTTTGCAGATATGAACGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCa < 1:2629850/140‑1 (MQ=255) cGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTTAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCa < 2:6903416/140‑1 (MQ=255) cGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCa < 1:1742959/140‑1 (MQ=255) cGAACATTACTCTTTTTTTGAAGCCTTCAAAGTTGGACGGTCTTGTTTGAATTTTTACAGTGAATGAACGATAACTGAAATACAAAACTACTATACAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACTCa < 2:4029374/140‑1 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAACAGAAGACGCaaa > 1:6232915/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 1:7415308/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 2:2360846/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 2:4527043/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 1:3694997/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 1:2196458/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 2:1464748/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 2:7261112/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 2:1126191/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 2:5503434/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 2:5874661/1‑140 (MQ=255) aCCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCaaa > 2:6279925/1‑140 (MQ=255) caaTTACACGTTTTTTTAATATATGAAAGGAGGACCGTCTGTTTTGAATTTTTCCAGAGAACGAACTATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAg < 1:1293187/138‑1 (MQ=255) tttACACTTTTTTTGAAGTGATGAAAGGCGGACCGTCTGGTTTGAATTTTTCCAGAGACCGAACGATAACTGAAATACAAAACGACTATAAAGATCAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAggg < 1:3778308/139‑1 (MQ=255) aTTACACTTTTTTTGAAGATATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAggg < 2:3598601/140‑1 (MQ=255) aTTACACGTTTTTTGAAGAGATTAAAGGAGGACCGTCTGGTTTGAATTTTTCCCGAGAACCAACGATAACTGAAATAAAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAggg < 1:3210996/140‑1 (MQ=255) aTTACACGTTTTTTGAAGAGATGAAAGGAGGACCTTCTGGTTTGAATTTTTCAAGAGAACGAACTATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAggg < 2:1994401/140‑1 (MQ=255) aTTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAggg < 2:6010213/140‑1 (MQ=255) cGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACTATAACTCAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTAc < 1:2394604/140‑1 (MQ=255) agTTTTTTGAAGAGATGAAAGGAGGACCGTCTGTTTTGAATTCTACCAGAGACCCCCCGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTAc < 1:5793941/139‑1 (MQ=255) tttttGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGa > 1:6985434/1‑140 (MQ=255) tttttGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGa > 1:728478/1‑140 (MQ=255) tttttGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGa > 2:5701141/1‑140 (MQ=255) tGAAGAGATGAAAGGAGGACCTTCTGTTTTTAATTTTGCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGt < 1:308948/140‑1 (MQ=255) tGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGt < 2:1047506/140‑1 (MQ=255) tGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGt < 2:3297049/140‑1 (MQ=255) tGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGt < 2:2497021/140‑1 (MQ=255) tGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGt < 2:4269938/140‑1 (MQ=255) tGAAGAGATGAAAGCAGCACCGTGTGGTTTGAATTTTGCCAGAGAACGAACCATCACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGt < 1:6770836/140‑1 (MQ=255) gAAGAGATGAAAGGAGGACCGTCTGGTTTTAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAACAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGtt < 2:3226998/140‑1 (MQ=255) ggcgcaCCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAACACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCgg < 1:922325/135‑1 (MQ=255) ggaggaCCGTCTGTTTTGAATTTTTCCAGAGAACGAACCATAACTTAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCgg < 1:4092952/140‑1 (MQ=255) ggaggaCCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCgg < 2:1575983/140‑1 (MQ=255) ggaggaCCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCgg < 2:5577250/140‑1 (MQ=255) ggaggaCCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCgg < 2:3145993/140‑1 (MQ=255) aggcCCGTCGGTTTTGAATTTTTCCCGCCAACGAACGATAACTGAAATAAAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGgcg < 1:656889/140‑1 (MQ=255) aggaCCGTCTGGTTTGAATTTTTCCAGAGAACGAACTATAACTTAAATAAAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGgcg < 1:6330284/140‑1 (MQ=255) aggaCCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGgcg < 1:3497777/140‑1 (MQ=255) aggaCCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGgcg < 2:6476192/140‑1 (MQ=255) aggaCAGTATGTTTTGAATTTTTCCAGATAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGgcg < 2:6849618/140‑1 (MQ=255) ccaCCGTCTGGTTTGAACTTTGCCAGAGAACGACCGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGgcgc < 2:4381540/138‑1 (MQ=255) gaCCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGcc > 2:3449016/1‑140 (MQ=255) gaCCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGcc > 1:1575423/1‑140 (MQ=255) gaCCGTCTGGTTTGAATTTTTCCAGAGAACGAAAGATAACTGAAATACAAAACGACTATAAAGAACACGTAGAGCGGCAGAATCAGCTGAATTAAATAAGACGAAAAGTGATGTACAGACGGTTGACTGTCTTCGGCGcc > 2:5303900/1‑140 (MQ=255) aCCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGccc > 1:5521318/1‑140 (MQ=255) cGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGCCCTa < 2:2326805/140‑1 (MQ=255) gTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGCCCTAg > 1:3330912/1‑140 (MQ=255) tCTGGTTTGAATTTTTCCAGAGAACGACCGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACg < 2:7410950/116‑1 (MQ=255) tCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAACACGTCTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGCCCTAGt > 1:1960737/1‑140 (MQ=255) tCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGTAAAGAAGAGGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGCGCTAGt > 2:2966787/1‑140 (MQ=255) tCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGCCCTAGt > 2:5800287/1‑140 (MQ=255) tCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGCCCTAGt > 2:4972833/1‑140 (MQ=255) tGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGCGCTAGTAt > 2:5034040/1‑140 (MQ=255) tGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGCCCTAGTAt > 2:1349707/1‑140 (MQ=255) | CTTCCTGTAAAGATGCGTCTAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGATTTCTCAAAAAGAAGAAGAAACTATTGGTAACCATAAGAACGACCATTACACGTTTTTTGAAGAGATGAAAGGAGGACCGTCTGGTTTGAATTTTTCCAGAGAACGAACGATAACTGAAATACAAAACGACTATAAAGAACAAGTAGAGCGGCAGAATCAGCTGAAGAAAAGAAGACGCAAAGGGCTGTACAGACGGTTGACTGTATTCGGCGCCCTAGTATTC > NZ_CP034943/68719‑68996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |