BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,663	A→C	5.4%	E169A (GAA→GCA) ‡	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,663	0	A	C	5.4%	692.3 / 6.9	298	E169A (GAA→GCA) ‡	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base A (155/114); new base C (15/11); total (172/126)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 300 total aligned reads displayed.

AGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAC  >  NZ_CP034943/607526‑607801

  ccaccggAGCGCCCGGGGAAGCCGGACCAGCCGGGGCCCCGGGAGCCACAGGGGCATCTGGGGAAGCGGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                                                                                                                                        <  1:4907139/135‑1 (MQ=17)

     cAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                                     <  2:3147866/140‑1 (MQ=255)

     cAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                                     <  1:252135/140‑1 (MQ=255)

      aGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCGACTGGCGAAGGCGGACCAGCCGGAGCGCCCGGAGGGACGGGAGCAGCCGTACCCGCAGGAACGGAAGGTGGTGCGGGGGAAGACGGag                                                                                                                                    >  2:1999015/1‑139 (MQ=9)

        gAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAGCCGGAGCTCCCGGAGCCCCCGGGGACGCAGGAGCa                                                                                                                                  >  2:5167467/1‑140 (MQ=14)

           cgcccGGGGAACCCGGACCAGCCGGGGCCCCGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                                               <  1:730889/137‑1 (MQ=255)

           cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGcc                                                                                                                               >  1:2628606/1‑140 (MQ=255)

           cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                                               >  1:6905225/1‑140 (MQ=255)

             aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGATCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAGCGGGAACaggcgg                                                                                                                             >  1:296352/1‑135 (MQ=17)

               cGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCAACCGGAGCCGCAGGACCAGCCGCAg                                                                                                                           >  2:2729944/1‑140 (MQ=14)

                   gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACCGGAGCAACCGGGGACGCCGGCCCGACCGGAGCGAc                                                                                                                       >  2:7170113/1‑140 (MQ=18)

                   gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGAc                                                                                                                       >  1:5380506/1‑140 (MQ=255)

                   gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                       <  2:6905225/140‑1 (MQ=255)

                   gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACTGGAGCGACCGGGGCTGCcggagcgaccggagcgac                                                                                                                       >  1:4860072/1‑140 (MQ=17)

                      gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAgg                                                                                                                    >  1:7535584/1‑140 (MQ=255)

                      gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGc                                                                                                                                         >  2:2342749/1‑119 (MQ=255)

                      gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCACCCGGAGCGACCCCAGCTACCGGCGAAGCGGGACCATCCGGAGCGACAGGAGCTAGCGGGGAAGCCGGACCAACCGGCGCGACCgg                                                                                                                    >  2:6124584/1‑140 (MQ=17)

                      gCCGGACCACCCGGGGCCACGGGAGCCCCAGGGGCTCCTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                    <  1:788947/140‑1 (MQ=255)

                                ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                          >  1:1748550/1‑140 (MQ=255)

                                    ggCCCCGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                      <  1:6009653/140‑1 (MQ=255)

                                    ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                      <  1:6370668/140‑1 (MQ=255)

                                    ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                      <  1:994169/140‑1 (MQ=255)

                                     gCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCAcgg                                                                                                            >  1:654154/1‑131 (MQ=255)

                                     gCCACGCGAGCCACAGGGGAGACCGGGGAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGTCAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGc                                                                                                     <  1:3878651/140‑1 (MQ=14)

                                          gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCAACCGGGGCAGCCGGag                                                                                                >  1:6679077/1‑139 (MQ=14)

                                          gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGCCCGGAGCTACCGGGGACTCCGGAc                                                                                                >  1:1082291/1‑140 (MQ=14)

                                          gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCTGAc                                                                                                >  1:6197513/1‑140 (MQ=255)

                                               ccACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCTACCGGGGAAGCCGGACCCGcc                                                                                           >  2:4225629/1‑140 (MQ=255)

                                                cacaGGCGCTACTGGGGAAGCCGGACCAGCCGGACCCAGCGGAGCTTCCGGCGACCCGGGAGCTGCCGGAGACACAGGAGCACCCGGCCAAGCCGGAGCCACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCg                                                                                          <  1:879421/140‑1 (MQ=2)

                                                 ccaGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGATACCGGGGAAGCCGGACCAGCCgg                                                                                         <  1:5615020/139‑1 (MQ=255)

                                                     gggCGACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCg                                                                                     <  1:371191/140‑1 (MQ=255)

                                                      ggCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGACCGa                                                                                    >  2:4691690/1‑140 (MQ=255)

                                                      ggCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGa                                                                                    >  2:6682106/1‑140 (MQ=40)

                                                       gCTCCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                   <  2:3884587/140‑1 (MQ=255)

                                                        cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAAGCCGGCCCAGCCGGCGCGAcg                                                                                  >  2:5918183/1‑139 (MQ=255)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCGACCGGGGAATCCGGACCAACCGGAGCGCCAGGAGCGACAGGCGCAGCCCGACAAACCGGATCGACAgg                                                                                >  2:1125660/1‑140 (MQ=11)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACCgg                                                                                >  2:6313963/1‑140 (MQ=14)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                >  2:6835788/1‑140 (MQ=255)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                >  2:618807/1‑140 (MQ=255)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                >  1:1382379/1‑140 (MQ=255)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACC‑GGGAAGCCCGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                                                               >  1:4816711/1‑140 (MQ=14)

                                                                gAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGGGAGGAGCCCCCGGCGACGCCGGACCAACCGGAGCTCCATTAGCAAACGGCGAAGCCGGACCACCACGCGCGAGAGGAGATAc                                                                          >  1:2764024/1‑140 (MQ=2)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGCCCGGGGACGCCGGACCAGCCGGAGCGCCAGGAGCTAcc                                                                         >  2:2454833/1‑140 (MQ=14)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGACGCCGGTCCAGCCGGCGCGTCCGGAGCGACCGGGGACGCCGGCGCAGCCGGAGCGCCCGGAGCTAcc                                                                         >  1:4677822/1‑140 (MQ=11)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                          >  1:3569760/1‑75 (MQ=34)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                          <  2:3666302/75‑1 (MQ=34)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                          <  2:3569760/75‑1 (MQ=34)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                                         >  2:1453721/1‑140 (MQ=255)

                                                                     cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCTGCCGGAGCGACAGGAGCTACCGCGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCGGGAGCTCCCgggg                                                                     >  1:6591910/1‑140 (MQ=14)

                                                                        cccAGCCGGCGCGACCGGCGCTACCGGGCCAGCCGGAGCAGCCGGAGCGACAGGAGCACCCGGCGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                  <  1:2158622/139‑1 (MQ=14)

                                                                        agcctccGGAGCCCCAGGAGCTACCGGTTAACCCGGACCTGCCGGTGCCACAGGAGCTACCGGGGACGCCGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                  <  2:6895381/135‑1 (MQ=14)

                                                                        accccccGGCGCGCCCGGAGCTCCCGGCGCACCCGGACCCGCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                  <  1:1946846/135‑1 (MQ=14)

                                                                        aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                  >  1:2356722/1‑140 (MQ=255)

                                                                             ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGAGCGACAGGCGCAACCGCCGCAGCCgca                                                             >  2:5434739/1‑138 (MQ=14)

                                                                                 aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGACGCCGGACCac                                                         >  2:7535366/1‑139 (MQ=255)

                                                                                       aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACCGGGGAAGCCGGACCATCCGGac                                                   >  2:5883439/1‑139 (MQ=255)

                                                                                       aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAg                                                   >  2:891238/1‑140 (MQ=255)

                                                                                       aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAg                                                   >  1:3781835/1‑140 (MQ=255)

                                                                                         gAGCTACCGGCGATCCCGGCCCAGCCGGAGCCCCAGGCGCTACCGGCGCCCCGGGAGCAACCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCCTCCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAACCGGAGCg                                                 <  1:544774/140‑1 (MQ=14)

                                                                                         gAGCTACCGGCGAAGCCGGACCCGCCCGAGGGCCAGGAGCTTGCGGGGCTGCGCGACCATACGGCGATACCGGACCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCg                                                 <  1:6732796/140‑1 (MQ=9)

                                                                                           gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGGCGGAGCGACAGGAGCTACCGGGCAACCCGGACCAACCGGAGCGAc                                               >  2:3333605/1‑140 (MQ=255)

                                                                                           gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                               >  2:1863899/1‑140 (MQ=40)

                                                                                              aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACATGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                            >  1:2462111/1‑140 (MQ=255)

                                                                                                  gggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAATCCGGACCAACAGGACCGACGGGAGcc                                        >  1:2273415/1‑140 (MQ=255)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                      <  2:4823734/140‑1 (MQ=37)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                    >  1:4001567/1‑62 (MQ=35)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                      <  1:1158628/140‑1 (MQ=255)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                      <  1:3928879/140‑1 (MQ=255)

                                                                                                    gAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                      <  1:339039/140‑1 (MQ=255)

                                                                                                     ccccccgACCCGCCGGAGCGACCGGAGCGACCGGGGACGCTGGACCAACCGGAGCGCCAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCcaca                                     <  1:5290950/134‑1 (MQ=14)

                                                                                                     caGCCGCACCCTCGGGAGCGACAGGCGCTCCCGGGTAACCCGGACCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                     <  1:403968/139‑1 (MQ=14)

                                                                                                     aaGCCGGACCAGCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                     <  1:5417928/140‑1 (MQ=255)

                                                                                                     aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGTACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                     <  2:1382379/140‑1 (MQ=255)

                                                                                                     aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGcc                                                                                                                >  1:3296955/1‑64 (MQ=18)

                                                                                                       ccgggACCCCCCGCAGCGACAGCAGCTACCGGCGAAGCCGGACCCCCCGGAGAGACAGGAGCTACCGGCGAAGCCGGACCCCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                   <  1:2046809/137‑1 (MQ=14)

                                                                                                       cccgccccACCCGGACCGCCACGCGCCCCCGGTGACGCCGGACCAACCGCACCCACAGTAGCTACCGGGGAAGCGGGACCCGCGGGAGCGACAGGAGCTACCGGCGCAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                   <  2:6714508/134‑1 (MQ=9)

                                                                                                       ccccgACCAGCCGGAGCGCCCGGAGCTCCCGTTGCATCCGGAGCCACCGGAGCTACAGGAGCACCCGGTGAACCCGGACCATCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                   <  2:4877785/136‑1 (MQ=14)

                                                                                                         cGGACCCGCCGGAGCGACAGGCGCTTCCGGCGAAGCCGGACCAACCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                 <  1:3128653/140‑1 (MQ=14)

                                                                                                                 ccGGAGCGACAGGCGCTCCCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                         <  1:2562298/140‑1 (MQ=255)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTAc                                                                                                              >  1:6106285/1‑55 (MQ=35)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGCCAGGAGCGACCGGCGAAGCCGGCCCAACCGGAGCGACCGGAGCCCCAGGAGcgcggggg                         >  2:3084794/1‑133 (MQ=14)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACGGGAGCCACCGGGGCTACTggg                         >  2:816836/1‑140 (MQ=255)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                         <  1:4234476/140‑1 (MQ=255)

                                                                                                                 ccGGAGCCCCCGGAGCTACCGCTGCCACCGGAGCTACCGGAGCCTCCGGAGCTGCCGGAGCACCCGGAGCCTCCGGAGCGACAGGCGCTACCGGTGAAGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTggg                         <  2:4974575/140‑1 (MQ=9)

                                                                                                                           aggaggTCCCGGGGAAGCGGGACCACCCGGAGCGACAGGAGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc               <  1:5155453/140‑1 (MQ=17)

                                                                                                                           aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCAACCGGGGAGACAGGACCAGCCGGAGCGACAGGAGCGACAGGTGCAGCCGGTCAAACCGGAGCCACGGGAGCCACAGCTGCGACGGGCGACGACGGAc               >  1:7607157/1‑140 (MQ=14)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGTCAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCAACTGGGGACGGCGGACCAGCCgg        >  1:1505556/1‑140 (MQ=18)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAGCCGGAGCCACAGGAGCGACCGGGGCCGCCGGAGCAACCGGAGCGCCGGGAGCCAGAGTGGCTACGGGGGGGGGCGGACGCGCCgg        >  2:4452421/1‑140 (MQ=14)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCGACTGGCGCAGTCGGACCTGcctg        >  2:5724317/1‑138 (MQ=17)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg        >  2:5642413/1‑140 (MQ=255)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACCGGAGCGACTGGGGCAGTCGGAGCAGGCgg        >  2:1804121/1‑140 (MQ=14)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg        <  1:1863899/140‑1 (MQ=255)

                                                                                                                                  aCCGGCGAACCCGGACCCCCCGGAGCGACAGGCGCTCCCGGGGAAGCCGGACCAGCCGGAGCCACCGGCGCGACCGGGGAAGCCGGCCCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg        <  2:652127/140‑1 (MQ=18)

                                                                                                                                    cGGGGGAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCGCCCGGGGAAGCCGGACCAACCGGAGCCACGGGAGCCACAGCGGCCCCGGGGCAAGTCGGAGCCGCGGGAg      >  2:2095258/1‑140 (MQ=14)

                                                                                                                                       ggAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCCGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGCGGCCGTCGGACAAGCCGGAGCGa   >  2:5315130/1‑140 (MQ=18)

                                                                                                                                       ggAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACAGGCGCCCCAGGCTCCGGCGGACCTGCCGGAGCgc   >  2:1698265/1‑139 (MQ=11)

                                                                                                                                        gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAGGCAGGCGCACGCGGAGCGACGGGAGCCACAGGGGCGACTGGGGAGGCCGGCCCCGCCGGAGCgcc  >  2:6405018/1‑138 (MQ=17)

                                                                                                                                        gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAACCCGCGGCCACCGGCGCGACAGGAGCCACCGGGGCTACAGGGGACGGCGGCCCAGCCGGAGCGAc  >  2:7138111/1‑140 (MQ=17)

                                                                                                                                        gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGGCGCCCCGGCGCGACGGGAGCCACTGGGGCGACGGGGGAGGGCGGGCCGGCCGGAGCgcc  >  2:3785503/1‑138 (MQ=14)

                                                                                                                                         aaGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                            <  1:565763/97‑1 (MQ=37)

AGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAC  >  NZ_CP034943/607526‑607801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`