BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,664	A→C	5.9%	E169D (GAA→GAC) ‡	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,664	0	A	C	5.9%	616.9 / 3.0	298	E169D (GAA→GAC) ‡	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base A (147/115); new base C (23/8); total (172/126)
Fisher's exact test for biased strand distribution p-value = 5.69e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 301 total aligned reads displayed.

AGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAC  >  NZ_CP034943/607526‑607801

aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGCAGCACCAGGGGAAg                                                                                                                                          >  2:6707452/1‑140 (MQ=14)

  ccaccggAGCGCCCGGGGAAGCCGGACCAGCCGGGGCCCCGGGAGCCACAGGGGCATCTGGGGAAGCGGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                                                                                                                                        <  1:4907139/135‑1 (MQ=17)

     cAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                                     <  2:3147866/140‑1 (MQ=255)

     cAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                                     <  1:252135/140‑1 (MQ=255)

      aGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCGACTGGCGAAGGCGGACCAGCCGGAGCGCCCGGAGGGACGGGAGCAGCCGTACCCGCAGGAACGGAAGGTGGTGCGGGGGAAGACGGag                                                                                                                                    >  2:1999015/1‑139 (MQ=9)

        gAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAGCCGGAGCTCCCGGAGCCCCCGGGGACGCAGGAGCa                                                                                                                                  >  2:5167467/1‑140 (MQ=14)

           cgcccGGGGAACCCGGACCAGCCGGGGCCCCGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                                               <  1:730889/137‑1 (MQ=255)

           cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGcc                                                                                                                               >  1:2628606/1‑140 (MQ=255)

           cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                                               >  1:6905225/1‑140 (MQ=255)

             aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGATCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAGCGGGAACaggcgg                                                                                                                             >  1:296352/1‑135 (MQ=17)

               cGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCAACCGGAGCCGCAGGACCAGCCGCAg                                                                                                                           >  2:2729944/1‑140 (MQ=14)

                   gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGAc                                                                                                                       >  1:5380506/1‑140 (MQ=255)

                   gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACTGGAGCGACCGGGGCTGCcggagcgaccggagcgac                                                                                                                       >  1:4860072/1‑140 (MQ=17)

                      gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGGGCTACCGGGGCCGCGGGACCGACCGGGGCGGCAgg                                                                                                                    >  2:6015477/1‑140 (MQ=18)

                      gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAgg                                                                                                                    >  1:7535584/1‑140 (MQ=255)

                      gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGc                                                                                                                                         >  2:2342749/1‑119 (MQ=255)

                      gCCGGACCACCCGGGGCCACGGGAGCCCCAGGGGCTCCTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                    <  1:788947/140‑1 (MQ=255)

                        cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                                                  <  2:6381808/140‑1 (MQ=255)

                        cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGCAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                                                  <  2:7074538/140‑1 (MQ=255)

                        cGGACCACCCGCGGCCCCGGGAGCCACAGGGGCTACGGGGGAAGCCGGAGCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                                                  <  2:1723419/140‑1 (MQ=17)

                                ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                          >  1:1748550/1‑140 (MQ=255)

                                    ggCCCCGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                      <  1:6009653/140‑1 (MQ=255)

                                    ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                      <  1:994169/140‑1 (MQ=255)

                                    ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                      <  1:6370668/140‑1 (MQ=255)

                                     gCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCAcgg                                                                                                            >  1:654154/1‑131 (MQ=255)

                                     gCCACGCGAGCCACAGGGGAGACCGGGGAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGTCAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGc                                                                                                     <  1:3878651/140‑1 (MQ=14)

                                          gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCAACCGGGGCAGCCGGag                                                                                                >  1:6679077/1‑139 (MQ=14)

                                          gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGCCCGGAGCTACCGGGGACTCCGGAc                                                                                                >  1:1082291/1‑140 (MQ=14)

                                               ccACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCTACCGGGGAAGCCGGACCCGcc                                                                                           >  2:4225629/1‑140 (MQ=255)

                                                cacaGGCGCTACTGGGGAAGCCGGACCAGCCGGACCCAGCGGAGCTTCCGGCGACCCGGGAGCTGCCGGAGACACAGGAGCACCCGGCCAAGCCGGAGCCACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCg                                                                                          <  1:879421/140‑1 (MQ=2)

                                                 ccaGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGATACCGGGGAAGCCGGACCAGCCgg                                                                                         <  1:5615020/139‑1 (MQ=255)

                                                   aGGGGCGACTGGGGAAGCCGGACCAGCCGGAGCTACAGGAGCTACCGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGCGAAGCCGGAGCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAg                                                                                       <  2:6450916/140‑1 (MQ=14)

                                                     gggCGACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCg                                                                                     <  1:371191/140‑1 (MQ=255)

                                                      ggCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGACCGa                                                                                    >  2:4691690/1‑140 (MQ=255)

                                                       gCTCCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                   <  2:3884587/140‑1 (MQ=255)

                                                        cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAAGCCGGCCCAGCCGGCGCGAcg                                                                                  >  2:5918183/1‑139 (MQ=255)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCGACCGGGGAATCCGGACCAACCGGAGCGCCAGGAGCGACAGGCGCAGCCCGACAAACCGGATCGACAgg                                                                                >  2:1125660/1‑140 (MQ=11)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                >  1:1382379/1‑140 (MQ=255)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACCGGAGCCACAGGACCAGCAGCAGCggggtt                                                                                >  2:618266/1‑135 (MQ=11)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACC‑GGGAAGCCCGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                                                               >  1:4816711/1‑140 (MQ=14)

                                                                gAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGGGAGGAGCCCCCGGCGACGCCGGACCAACCGGAGCTCCATTAGCAAACGGCGAAGCCGGACCACCACGCGCGAGAGGAGATAc                                                                          >  1:2764024/1‑140 (MQ=2)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGCCCGGGGACGCCGGACCAGCCGGAGCGCCAGGAGCTAcc                                                                         >  2:2454833/1‑140 (MQ=14)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGACGCCGGTCCAGCCGGCGCGTCCGGAGCGACCGGGGACGCCGGCGCAGCCGGAGCGCCCGGAGCTAcc                                                                         >  1:4677822/1‑140 (MQ=11)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                          <  2:3569760/75‑1 (MQ=34)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                          >  1:3569760/1‑75 (MQ=34)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                                         >  2:1453721/1‑140 (MQ=255)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAATCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                                         >  2:6899574/1‑140 (MQ=255)

                                                                     cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCTGCCGGAGCGACAGGAGCTACCGCGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCGGGAGCTCCCgggg                                                                     >  1:6591910/1‑140 (MQ=14)

                                                                        cccAGCCGGCGCGACCGGCGCTACCGGGCCAGCCGGAGCAGCCGGAGCGACAGGAGCACCCGGCGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                  <  1:2158622/139‑1 (MQ=14)

                                                                        accccccGGCGCGCCCGGAGCTCCCGGCGCACCCGGACCCGCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                  <  1:1946846/135‑1 (MQ=14)

                                                                        aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                  >  1:2356722/1‑140 (MQ=255)

                                                                             ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGAGCGACAGGCGCAACCGCCGCAGCCgca                                                             >  2:5434739/1‑138 (MQ=14)

                                                                                  gCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAc                                                        <  2:7655476/140‑1 (MQ=255)

                                                                                       aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACCGGGGAAGCCGGACCATCCGGac                                                   >  2:5883439/1‑139 (MQ=255)

                                                                                       aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAg                                                   >  1:3781835/1‑140 (MQ=255)

                                                                                         gAGCTACCGGCGATCCCGGCCCAGCCGGAGCCCCAGGCGCTACCGGCGCCCCGGGAGCAACCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCCTCCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAACCGGAGCg                                                 <  1:544774/140‑1 (MQ=14)

                                                                                         gAGCTACCGGCGAAGCCGGACCCGCCCGAGGGCCAGGAGCTTGCGGGGCTGCGCGACCATACGGCGATACCGGACCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCg                                                 <  1:6732796/140‑1 (MQ=9)

                                                                                           gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAGGCGGAGCGACTGGAGCGACCGCGGCAGCGGGACCAACCGGACCGAc                                               >  2:6751462/1‑140 (MQ=11)

                                                                                           gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGGCGGAGCGACAGGAGCTACCGGGCAACCCGGACCAACCGGAGCGAc                                               >  2:3333605/1‑140 (MQ=255)

                                                                                           gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                               >  2:1863899/1‑140 (MQ=40)

                                                                                              aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACATGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                            >  1:2462111/1‑140 (MQ=255)

                                                                                                  gggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAATCCGGACCAACAGGACCGACGGGAGcc                                        >  1:2273415/1‑140 (MQ=255)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                      <  2:4823734/140‑1 (MQ=37)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                    >  1:4001567/1‑62 (MQ=35)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                      <  1:1158628/140‑1 (MQ=255)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                      <  1:3928879/140‑1 (MQ=255)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                      <  2:7159241/140‑1 (MQ=255)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACAAGACGGAGCGGCAGGAGCTACCGGTGAAGCCGGACCAACCGGAGCGACGGGAGCaac                                      >  2:369071/1‑140 (MQ=14)

                                                                                                    gAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                      <  1:339039/140‑1 (MQ=255)

                                                                                                     ccccccgACCCGCCGGAGCGACCGGAGCGACCGGGGACGCTGGACCAACCGGAGCGCCAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCcaca                                     <  1:5290950/134‑1 (MQ=14)

                                                                                                     caGCCGCACCCTCGGGAGCGACAGGCGCTCCCGGGTAACCCGGACCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                     <  1:403968/139‑1 (MQ=14)

                                                                                                     aaGCCGGACCAGCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                     <  1:5417928/140‑1 (MQ=255)

                                                                                                     aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGTACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                     <  2:1382379/140‑1 (MQ=255)

                                                                                                     aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGcc                                                                                                                >  1:3296955/1‑64 (MQ=18)

                                                                                                       gctgtagcAGCCCGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                   <  2:7472746/133‑1 (MQ=14)

                                                                                                       gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACa                                                                                                                      <  2:5732705/57‑1 (MQ=31)

                                                                                                       ccgggACCCCCCGCAGCGACAGCAGCTACCGGCGAAGCCGGACCCCCCGGAGAGACAGGAGCTACCGGCGAAGCCGGACCCCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                   <  1:2046809/137‑1 (MQ=14)

                                                                                                       ccccgACCAGCCGGAGCGCCCGGAGCTCCCGTTGCATCCGGAGCCACCGGAGCTACAGGAGCACCCGGTGAACCCGGACCATCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                   <  2:4877785/136‑1 (MQ=14)

                                                                                                         cGGACCCGCCGGAGCGACAGGCGCTTCCGGCGAAGCCGGACCAACCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                 <  1:3128653/140‑1 (MQ=14)

                                                                                                         cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                 >  1:6286163/1‑140 (MQ=255)

                                                                                                            aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                                                     <  2:866566/101‑1 (MQ=35)

                                                                                                                 ccGGAGCGACAGGCGCTCCCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                         <  1:2562298/140‑1 (MQ=255)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTAc                                                                                                              >  1:6106285/1‑55 (MQ=35)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGCCAGGAGCGACCGGCGAAGCCGGCCCAACCGGAGCGACCGGAGCCCCAGGAGcgcggggg                         >  2:3084794/1‑133 (MQ=14)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                         <  1:4234476/140‑1 (MQ=255)

                                                                                                                 ccGGAGCCCCCGGAGCTACCGCTGCCACCGGAGCTACCGGAGCCTCCGGAGCTGCCGGAGCACCCGGAGCCTCCGGAGCGACAGGCGCTACCGGTGAAGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTggg                         <  2:4974575/140‑1 (MQ=9)

                                                                                                                    gAGCGACAGGCGCTACGGGGGCAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGAc                      <  2:6882772/140‑1 (MQ=255)

                                                                                                                          cAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGa                <  2:6286163/140‑1 (MQ=255)

                                                                                                                           aggaggTCCCGGGGAAGCGGGACCACCCGGAGCGACAGGAGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc               <  1:5155453/140‑1 (MQ=17)

                                                                                                                           aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCGACTGGGGACGTCGGAc               >  2:6563354/1‑140 (MQ=255)

                                                                                                                           aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCAACCGGGGAGACAGGACCAGCCGGAGCGACAGGAGCGACAGGTGCAGCCGGTCAAACCGGAGCCACGGGAGCCACAGCTGCGACGGGCGACGACGGAc               >  1:7607157/1‑140 (MQ=14)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGTCAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCAACTGGGGACGGCGGACCAGCCgg        >  1:1505556/1‑140 (MQ=18)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAGCCGGAGCCACAGGAGCGACCGGGGCCGCCGGAGCAACCGGAGCGCCGGGAGCCAGAGTGGCTACGGGGGGGGGCGGACGCGCCgg        >  2:4452421/1‑140 (MQ=14)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg        >  2:5642413/1‑140 (MQ=255)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACCGGAGCGACTGGGGCAGTCGGAGCAGGCgg        >  2:1804121/1‑140 (MQ=14)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg        <  1:1863899/140‑1 (MQ=255)

                                                                                                                                    cGGGGGAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCGCCCGGGGAAGCCGGACCAACCGGAGCCACGGGAGCCACAGCGGCCCCGGGGCAAGTCGGAGCCGCGGGAg      >  2:2095258/1‑140 (MQ=14)

                                                                                                                                       ggAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCCGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGCGGCCGTCGGACAAGCCGGAGCGa   >  2:5315130/1‑140 (MQ=18)

                                                                                                                                        gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGGCGCCCCGGCGCGACGGGAGCCACTGGGGCGACGGGGGAGGGCGGGCCGGCCGGAGCgcc  >  2:3785503/1‑138 (MQ=14)

                                                                                                                                         aaGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                            <  1:565763/97‑1 (MQ=37)

AGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAC  >  NZ_CP034943/607526‑607801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`