BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,665	G→C	5.2%	A170P (GCC→CCC)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,665	0	G	C	5.2%	696.1 / 5.1	293	A170P (GCC→CCC)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base G (157/109); new base C (10/10); total (170/123)
Fisher's exact test for biased strand distribution p-value = 4.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 314 total aligned reads displayed.

AGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGG  >  NZ_CP034943/607526‑607804

  ccaccggAGCGCCCGGGGAAGCCGGACCAGCCGGGGCCCCGGGAGCCACAGGGGCATCTGGGGAAGCGGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                                                                                                                                           <  1:4907139/135‑1 (MQ=17)

     cAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                                        <  2:3147866/140‑1 (MQ=255)

           cgcccGGGGAACCCGGACCAGCCGGGGCCCCGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                                                  <  1:730889/137‑1 (MQ=255)

           cTACCGGGGCAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGTCGGACCAAcc                                                                                                                                  <  1:1756426/140‑1 (MQ=255)

           cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                                                  >  1:6905225/1‑140 (MQ=255)

           cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                                                  <  1:2500553/140‑1 (MQ=255)

             aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGATCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAGCGGGAACaggcgg                                                                                                                                >  1:296352/1‑135 (MQ=17)

             aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCACCCGGGGACCCCGGACCacacgg                                                                                                                                >  2:6226883/1‑135 (MQ=17)

             aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                                                >  1:4823734/1‑140 (MQ=255)

                   gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACCGGAGCAACCGGGGAAGCCGGTGCCACCGGAGCGAc                                                                                                                          >  2:5550082/1‑140 (MQ=17)

                   cccgCCGGCCCAGCCGGGGCCACGGGAGCCACCGGGGCGACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCCGCCGGAGCGACCGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                          <  1:5370718/137‑1 (MQ=17)

                      gCCGGACCCGCCGGGGCCACGGGAGCCACAGGGGCTACGGGCGAAGCCGGACCAGCCGGAGCGACAGGCGCTACCGGGGATGCCGGACCTGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCACCGGAGCGACAgg                                                                                                                       <  1:1473228/140‑1 (MQ=17)

                      gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAgg                                                                                                                       >  1:7535584/1‑140 (MQ=255)

                      gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCACCCGGAGCGACCCCAGCTACCGGCGAAGCGGGACCATCCGGAGCGACAGGAGCTAGCGGGGAAGCCGGACCAACCGGCGCGACCgg                                                                                                                       >  2:6124584/1‑140 (MQ=17)

                      gCCGGACCACCCGGGGCCACGGGAGCCACAGGGGCTACTGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCAGGAGCGACAGGAGATACCGGGGCAGCAGCACCAAGACGAGCCACAgt                                                                                                                       >  1:994662/1‑139 (MQ=17)

                      gCCGCACCAGCCGGGGCCACGCGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                       <  1:2400681/140‑1 (MQ=255)

                        cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCCACCGGAGCGACAGGAg                                                                                                                     >  2:5883712/1‑140 (MQ=255)

                        cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                                                     <  2:5395111/140‑1 (MQ=255)

                           cccAGCCGGGGCCTCCGGTGCCACAGGGGCTTCTGGGGAAGCCGGAGCAGCCGGAGCGACCGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTa                                                                                                                  <  1:1887722/139‑1 (MQ=17)

                           aCCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGCGAAGCCGGACCACCCGCAGCGGCGGGAGccg                                                                                                                  >  2:172997/1‑138 (MQ=17)

                           aCCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGCGAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCGGCATGACCACCCGGACCGACCGCAGcga                                                                                                                  >  2:6921998/1‑138 (MQ=17)

                                ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCggg                                                                                                             >  1:2266750/1‑140 (MQ=255)

                                acGGCGCCACCGGAGCCCCAGGCGCTCCAGGTGACCCCGGACCCCCCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                             <  1:851428/139‑1 (MQ=14)

                                    ggCCCCGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                         <  1:6009653/140‑1 (MQ=255)

                                    ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                         <  1:6370668/140‑1 (MQ=255)

                                     gCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCAcgg                                                                                                               <  2:654154/133‑3 (MQ=255)

                                     gCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCAcgg                                                                                                               >  1:654154/1‑131 (MQ=255)

                                          gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCAACCGGGGCAGCCGGag                                                                                                   >  1:6679077/1‑139 (MQ=14)

                                          gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGCCCGGAGCTACCGGGGACTCCGGAc                                                                                                   >  1:1082291/1‑140 (MQ=14)

                                               ccACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAATCAGGACCAACCGGAGCGACAGGAGCTACCGGGGATGCCGGACCAGcc                                                                                              >  1:3884587/1‑140 (MQ=255)

                                                 ccaGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGATACCGGGGAAGCCGGACCAGCCgg                                                                                            <  1:5615020/139‑1 (MQ=255)

                                                     gggCGACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCg                                                                                        <  1:371191/140‑1 (MQ=255)

                                                      ggCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGa                                                                                       >  2:6682106/1‑140 (MQ=40)

                                                       gCTCCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                      <  2:3884587/140‑1 (MQ=255)

                                                        cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCTACGGGGGCCCCCGGACCACCAGGAGCGACAGGAGCAACCGAGGAACCCGCGCCACCCGGACCGACa                                                                                     >  2:4389319/1‑140 (MQ=11)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                   >  2:6835788/1‑140 (MQ=255)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                   >  1:1382379/1‑140 (MQ=255)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                   >  2:1316649/1‑140 (MQ=255)

                                                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACCGGGGACGCCGGCCCAGCCGGAGCTAGAGTAGATACCGGTGAAGCAGGACACGCCGGACCgggagg                                                                                   >  2:2058885/1‑135 (MQ=11)

                                                            tGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                                                     <  1:993221/104‑1 (MQ=38)

                                                               ggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGcga                                                                              >  2:1538868/1‑138 (MQ=255)

                                                                gAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGGGAGGAGCCCCCGGCGACGCCGGACCAACCGGAGCTCCATTAGCAAACGGCGAAGCCGGACCACCACGCGCGAGAGGAGATAc                                                                             >  1:2764024/1‑140 (MQ=2)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGACGCCGGTCCAGCCGGCGCGTCCGGAGCGACCGGGGACGCCGGCGCAGCCGGAGCGCCCGGAGCTAcc                                                                            >  1:4677822/1‑140 (MQ=11)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                                            >  1:2558169/1‑140 (MQ=255)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAAGCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCTAGAGGAGcagcc                                                                            >  1:2605581/1‑136 (MQ=14)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                             <  2:3569760/75‑1 (MQ=34)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                             >  1:3569760/1‑75 (MQ=34)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGTCAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACGGTAGCGAcc                                                                            >  1:214080/1‑140 (MQ=11)

                                                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACAAGCCGGAGCGACAGGAGCGAcc                                                                            >  2:4850454/1‑140 (MQ=255)

                                                                   gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGCCCCCCCGGAGCGACAGGAGCGACAGGGGAAGCCGGGCCAGCCGGCGCGACAGGAGCTACCgg                                                                          >  2:524043/1‑140 (MQ=14)

                                                                     cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCTGCCGGAGCGACAGGAGCTACCGCGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCGGGAGCTCCCgggg                                                                        >  1:6591910/1‑140 (MQ=14)

                                                                     cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACCCCGGACCACCCGGAGCGACAGGAGCTCGGGGGGTCCCCGGCCCAGCCGGAGCGTCGGGAGCTAgggggg                                                                        >  2:2671817/1‑140 (MQ=11)

                                                                        aCCCGCCGGAGCGCGCGGAGCTACGGGCGCCGCCGGACCTCCGGCAGCTACAGGAGATACCGGGGCAGCGGGACCTTCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                     <  2:6895396/140‑1 (MQ=2)

                                                                          cAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                                                                   <  2:2266750/140‑1 (MQ=255)

                                                                          cAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                                                                   <  2:1858539/140‑1 (MQ=255)

                                                                             ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                             <  1:1978866/95‑1 (MQ=37)

                                                                             ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                             >  2:1978866/1‑95 (MQ=37)

                                                                                 aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGACGCCGGACCac                                                            >  2:7535366/1‑139 (MQ=255)

                                                                                      cAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGGCGGAGCGCCAGGAGCTACCGGGGAAGCCGGGCCAGCCGGAGCGCCAGGCGCTACCGGGGAGGCCGGAGCATCCGGa                                                       >  2:1394760/1‑140 (MQ=11)

                                                                                       aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAg                                                      >  1:7655476/1‑140 (MQ=255)

                                                                                         gAGCTACCGGCGATCCCGGCCCAGCCGGAGCCCCAGGCGCTACCGGCGCCCCGGGAGCAACCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCCTCCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAACCGGAGCg                                                    <  1:544774/140‑1 (MQ=14)

                                                                                         gAGCTACCGGCGAAGCCGGACCCGCCCGAGGGCCAGGAGCTTGCGGGGCTGCGCGACCATACGGCGATACCGGACCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCg                                                    <  1:6732796/140‑1 (MQ=9)

                                                                                           gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGGCGGAGCGACAGGAGCTACCGGGCAACCCGGACCAACCGGAGCGAc                                                  >  2:3333605/1‑140 (MQ=255)

                                                                                                cGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAg                                             >  1:539369/1‑140 (MQ=40)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCCACAGGGGCAGCAGGACCAGCCGGAGCGACCGGAGCTACCGGCGAAGCCGGACCAGCCGGAGCTACCGGAGCcac                                         >  2:5737005/1‑140 (MQ=11)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                       >  1:4001567/1‑62 (MQ=35)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                         <  1:1158628/140‑1 (MQ=255)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACAAGACGGAGCGGCAGGAGCTACCGGTGAAGCCGGACCAACCGGAGCGACGGGAGCaac                                         >  2:369071/1‑140 (MQ=14)

                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCAACCGGGGACGCAGGACCAGCCGGAGCGACAGGAGCAACCGGCGACGCCGGACCACCCGGAGCGCCGGGAGcacc                                         >  2:6430479/1‑137 (MQ=11)

                                                                                                    gAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                         <  1:339039/140‑1 (MQ=255)

                                                                                                     caGCCGCACCCTCGGGAGCGACAGGCGCTCCCGGGTAACCCGGACCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                        <  1:403968/139‑1 (MQ=14)

                                                                                                     aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGcc                                                                                                                   >  1:3296955/1‑64 (MQ=18)

                                                                                                      cgCCGGACCAGGCGGACCCACAGGTGCTACGGGTGAAGCCGGACCCAGCGGTCCCACAGGAGCTACCGGCGAAGCGGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAg                                       <  2:461514/139‑1 (MQ=14)

                                                                                                       gCCGGACCACCCGGCCCCCCAGGAGCCACCGGCGCACCCGGAGGAACCGGAGCGACAGGAGCTACCGGGCCACACGGAGCATCGGGAGCCACATGAGCTACCGTGGAAGCCGGACCACCCGGAGCGAATGGAGCCACAgg                                      <  2:7146358/140‑1 (MQ=2)

                                                                                                       cccgccccACCCGGACCGCCACGCGCCCCCGGTGACGCCGGACCAACCGCACCCACAGTAGCTACCGGGGAAGCGGGACCCGCGGGAGCGACAGGAGCTACCGGCGCAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                      <  2:6714508/134‑1 (MQ=9)

                                                                                                         cGGACCCGCCGGAGCGACAGGCGCTTCCGGCGAAGCCGGACCAACCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                    <  1:3128653/140‑1 (MQ=14)

                                                                                                         cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                    <  2:2356722/140‑1 (MQ=255)

                                                                                                         cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                    >  1:6286163/1‑140 (MQ=255)

                                                                                                            aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                                                        <  2:866566/101‑1 (MQ=35)

                                                                                                                gCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAACCGGAGCGACAGGAGCTACCGGCGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGACCGGAGCCACGGgcgcgccggg                             >  2:5074445/1‑134 (MQ=14)

                                                                                                                 ccGGAGCGACAGGCGCTCCCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                            <  1:1640955/140‑1 (MQ=255)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTAc                                                                                                                 >  1:6106285/1‑55 (MQ=35)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACGGGAGCCACCGGGGCTACTggg                            >  2:816836/1‑140 (MQ=255)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                            <  1:4234476/140‑1 (MQ=255)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                            <  1:3854040/140‑1 (MQ=255)

                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAGGCCGGACAAAGCGGAGCGACGGGATCCCCAGGCGCTACAggg                            >  2:3000016/1‑140 (MQ=14)

                                                                                                                           aGGCGCTCCCGGGGCAGCCGGACCAACCGGAGCGACAGGACCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCCCAGGGGCTACTGGGGACGTCGGAc                  <  1:2354572/140‑1 (MQ=18)

                                                                                                                           aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc                  >  1:4864661/1‑140 (MQ=255)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCTACCGGAGCGCCGGGAGCCACAGGGGGTCATGGGGACGACGGACCAGCCgg           >  1:5249571/1‑140 (MQ=17)

                                                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg           >  1:5102687/1‑140 (MQ=255)

                                                                                                                                  aCCGGGGAACCCGGACCCACCGGAGCGACAGGAGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg           <  2:6319291/140‑1 (MQ=255)

                                                                                                                                    cGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGCCCGGAGCTACCGGGGCCGCCGGAGCAACCGGAGCGACGGGAGCCAGAGGGGCTACGGGGGACGTCGGACCAGCCGGAg         >  2:4787429/1‑140 (MQ=18)

                                                                                                                                    cGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAg         >  2:4882269/1‑140 (MQ=255)

                                                                                                                                       cgacgCCGCACCCACCGGAGCGCCAGGACCCCCCGGCGACGCCGGACCAGGCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGa      <  1:3938729/136‑1 (MQ=18)

                                                                                                                                        gcaGCAGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAc     <  2:5990153/138‑1 (MQ=255)

                                                                                                                                        gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGGCGCCCCGGCGCGACGGGAGCCACTGGGGCGACGGGGGAGGGCGGGCCGGCCGGAGCgcc     >  2:3785503/1‑138 (MQ=14)

                                                                                                                                         aaGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                               <  1:565763/97‑1 (MQ=37)

                                                                                                                                         aaGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                               >  2:565763/1‑97 (MQ=37)

                                                                                                                                           gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGACCGGAGCCACAGGCGCAACAGGCCCAGTCGCACCAGCCGGAGCGCCAgc  >  2:4068156/1‑139 (MQ=14)

                                                                                                                                           gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg  >  2:7215212/1‑140 (MQ=255)

AGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGG  >  NZ_CP034943/607526‑607804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`