| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 803,252 | G→T | 7.9% | S37R (AGC→AGA) | yfmC ← | Fe(3+)‑citrate ABC transporter substrate‑binding protein YfmC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 803,252 | 0 | G | T | 7.9% | 1192.5 / 11.9 | 494 | S37R (AGC→AGA) | yfmC | Fe(3+)‑citrate ABC transporter substrate‑binding protein YfmC |
| Reads supporting (aligned to +/- strand): ref base G (251/182); new base T (59/2); total (310/184) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.45e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 518 total aligned reads displayed.
TTCCCACCGGCGTAATGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAA > NZ_CP034943/803119‑803391 | tCCCACCGGCGTAATGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCgc < 1:981469/140‑1 (MQ=255) cACCGGCGTAATGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCgctgc < 2:3057106/140‑1 (MQ=255) cGGCGTAATGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGACTCCTTAGACTTGCTTTCGCTGCTTc < 1:2104055/140‑1 (MQ=255) cGGCGTAATGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTc < 2:6781987/140‑1 (MQ=255) cGGCGTAATGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTc < 1:159857/140‑1 (MQ=255) cGGCGTAATGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTc < 2:4346132/140‑1 (MQ=255) cGGCGTAATGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTc < 1:1006213/140‑1 (MQ=255) cGTAATGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGc > 2:7098478/1‑140 (MQ=255) tGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGCTCACTCTAGAATCCTTAGACTTGCTTTAGCTGCTTGCGCTGTTa > 2:6154975/1‑140 (MQ=255) tGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACTTCTTCGTGCTGGATCACACTAGAATCCTTAGACTTTCTTTCGCTGCTTCCGCTGTTa > 2:1356201/1‑140 (MQ=255) ccGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACGTCTTCGTGCTGGATCACGCTAGAATACTTAGACTTGGTTTCGCTGCGTCCGCTGGTAtt > 2:5944935/1‑140 (MQ=255) agaTTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTGCTTATTGGGGGTGGTTCACGCAATAATCCTTATACTTTGTTTCGGTGCTTGCGCGGGTATTctt > 1:3617956/1‑139 (MQ=255) agaTTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACTTCTTCGTGCTGGATCACTCTATAATACTTAGACTTTCTTTAGCTGCTTGCGCTGTTAttatt > 2:129512/1‑137 (MQ=255) agaTTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACTAATTCGTTCTGGGTAACACTAGAAAACATAGAAATGCTTTCGCTGCATCCGCTGTTAtaatg > 1:2748234/1‑136 (MQ=255) taTTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTctgg < 2:3996021/139‑1 (MQ=255) ttGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTctggct < 2:7688377/140‑1 (MQ=255) cAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGaa < 1:830416/140‑1 (MQ=255) cAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGaa < 1:5772766/140‑1 (MQ=255) cAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGaa < 1:709973/140‑1 (MQ=255) aGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGAATTGCTTTCGCTGCTTGCGCTGTTATTCTGGCTGGATGAAc > 2:1753460/1‑140 (MQ=255) aGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTATTGGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGGTATTCTGGCTGGATGTAc > 2:6129412/1‑140 (MQ=255) gCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTGCTTGTTGGGGGTGGATCACTCTATAATCCTTATAATTGCTTTGGCTGCTTGCGCGGTTATTATGGGTGGAttgaca > 1:5209805/1‑135 (MQ=255) gCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTGCTTCTTGGTGGTGGTTCAATCGAGAATCCTTAGACTTTCTTTCGCTGCTTCCCCTGTTATTATGGCTTGTTGaaaa > 1:6584085/1‑138 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTGCTTCTTGGTGGTGGTTCACACTATAAACCTTATACATTGTTTTGCTGCTTACGCTGTTATTATGGGTGGTTGAACAg > 1:1144224/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTGCTTCTTAGTGGTGGATGACTCTATAATACGTAGACTTGGTTTGGCTGCTTCCGCGGTTATTGTGGGGGGGTGAACAg > 1:3996738/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTGTTCGTGCTGGATCACTCTAGAATGCTTAGACGTGCTTTCGCTGCTTCCGCTGTTATTCTTGCTGGGTGAAccg > 2:2123571/1‑138 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTATGGGTGGTTGAACAg > 2:1130735/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATAACTCTAGAATCCTTAGACTTGGGTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAg > 2:729907/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCAGTCTTCGTGCTGGATAACTCTACAAACCTTAGACTTGCGTTGGCTGCTTCCGCTGGTAATCTCGGTGGAAGCACAg > 2:5794337/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACTTCTTCGTGCTGGATGACTCTAGAATACTTAGACTTGCTTTGGCTGCTTCCGCGGTTTTTCTTGCGGGATGTACAg > 1:7410074/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACTTCTTCGTGCTGGATCACTCTAGAATACTTAGACTTGCTTTAGCTGCTTCCGCTGTTATTATTGCTGGATGaaaac > 2:6004145/1‑137 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTGCTTGTTCGTGGTGGATCACGCTAGAATACTTAGGCTTTCTTTCGCTGGTTGCGCGGTTTTTATGGGGGGGTGTACAg > 1:6050976/1‑140 (MQ=255) ccAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTGTGCGGGGTGGGGCACGCTAGTATACGTAGACTTGCTTTCGCTGCTTCCGCTGGTATTCTGGCGGGCTGTACAGCCg > 1:4787752/1‑140 (MQ=255) ccAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATACTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTTGCTTGTTGTACAGCCg > 2:1883140/1‑140 (MQ=255) ccAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTAGTGCTGGATCACTCAAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCg > 2:1668961/1‑140 (MQ=255) ccAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTGTTGGTTGTGTGTGCTGGATCACGCTAGAAACCGTTTACATGATTTGGCTGCGTACGGGGTTTTTATTGGTGGGTGTACAGCCg > 1:1988717/1‑140 (MQ=255) ccAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTGCGTGTTAGTGCTGGGTACCTCTAGAATCCATAGACTTGCGTTGGCTGCTTACGCTGTTATTGTGGGTGGTTGTAAAGCCg > 1:4550308/1‑140 (MQ=255) ccAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTCCGTCTTCGTGCTGGATCACTCTAGAATCCGTAGACTTGCTTTGGCTGCTTCCGCTGTTATTCTGGCTGGGTGAACAGCCg > 2:2719759/1‑140 (MQ=255) ccAAGAATGAAAGCTCAAGGACAACCACTCGGTTAGGTGTGCCGCTTACTGTCGTGGTTAAGTCTTCGTGCTGGGGCACTGTTGAATCCTTTGCGTTGGTTTGGGGGCTTGGCCTGTTATTCTGGGTGGGTGTCCAGCCg > 1:6831852/1‑140 (MQ=255) caGAATGAAAGCTCAAGGACAACCACTAGTTTAGGTGTGCCTATTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGa < 2:7610123/139‑1 (MQ=255) aaGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGa < 2:7523430/140‑1 (MQ=255) aaGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGa < 2:4832216/140‑1 (MQ=255) gAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCGGGCTGGATGAACAGCCGGATa < 2:2688275/140‑1 (MQ=255) aaTGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGaa < 1:5690927/129‑1 (MQ=255) aaaGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTTCTTCTTAGTGGTTGTTCACGCTAGAATCCTTTGACGTTGGTTGGCGGGGTGCGCTGTTATTGTGGGTGGGTGGAAACCCGGATaacaag > 1:6717310/1‑135 (MQ=255) aaaGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTGCTTGTTCGTGGTGGGTCACTCTAGAATCCTTAGACTTTGTTTCGCTGCGTCCGCTGGTATTGTGGCTGGATGAACAGGCGGATACAATg > 2:3204155/1‑140 (MQ=255) aaaGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTCCGTCTTCGTGGGGGATTACTCTAGAAACCATCGACTTTGGTTCGGAGCTTGAGGGGTTATTCTGTCTGGATGTAAACCCGGAGACaaag > 1:4714679/1‑138 (MQ=255) aaaGCTCAAGGACAACCACGCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACTTCTTCGTGCTGGATCACTCTAGAAACCTTAGACTTTCTTTCGCTGCTTCCCCTGTTATTCTGGCTGGATGAACAGCCGGATACAATg > 2:62287/1‑140 (MQ=255) aCCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTATTCGTGCTGGATCACTCTAGAATCCTTAGACTTTCTTTAGCTGCTTCCGCGGTTATTATGGCTGGATGAACACCCGGATACAAAGAAAAAGGCGATtaa > 2:2559364/1‑140 (MQ=255) ccACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTGCTTGTTACTGCTGGATAACACGAGAATCCGGAGACTTGCTTTGGCTGCTTACGCTGTTATTCTTGGGGGATGAAAACCCGGATACAATAAAAAAGGCGAGtaat > 2:3676916/1‑140 (MQ=255) ccACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCATCGTGCTGGATCAATATAGAAACCGTAGAATTTATTTAGCTGCATCCGCAGTTATTATGGCTTGATGAACACCCCGAAAAAAATAAAAACGCGATtaat > 2:2469741/1‑140 (MQ=255) aCTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATtaataa < 2:1471155/140‑1 (MQ=255) cTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATaaa < 1:7669561/140‑1 (MQ=255) tCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATaaaa < 2:5224771/140‑1 (MQ=255) tCGTTTAGGTGTGCCGCTTACTGTCGTGTTTCCTTCTTCGTGCTGGATCACTCTACAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGATGGATGAACAGCCGGATAAAATGAAACAGGCGATTAATaaaa > 2:6956064/1‑140 (MQ=255) gTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAaca < 2:3140420/140‑1 (MQ=255) tgtgCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGa < 2:5577331/140‑1 (MQ=255) ccGCTTACTGTCGTTTTTGCTTATTCGTTCTGGATCACACTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTATGGGTGGATGAACAGCCGGATACAATGAAACAGGCGCTTAATAAAAAACTCATGATatc > 2:4919463/1‑138 (MQ=255) ccGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAAAACTTAGAATTGCTTTCGCTGCTTACGCTGTTATTCTGGCGGGATGAAAAGCCGGATACAAAGAAAAAGGCGATTAATAAAACAATCATTATAGc > 2:5470257/1‑140 (MQ=255) ccGCTTACTGTCGTTTTTCCTTCATCGTGGTGGCTCACTCTAGAATCCGTAGACTTGCTTTAGCTTCTTCCGCTGTTATTCTTGCTGGATGAACAGCCCGATACAATTAAAAAGGCGATTAATAAAAAACACATGATAGc > 2:845631/1‑140 (MQ=255) ccGCTTACTGTCGTTTTTACTTCTTAGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTACCCGGTTATTATGGCTGGATGAACAGCCGGATACAAATAAAAACGCGATTAATAAAACACTCATGATAGc > 2:6406429/1‑140 (MQ=255) cTTACTGTCTTTTTTCGTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTTCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGACCAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAAt < 2:6634345/140‑1 (MQ=255) cTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGTTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAAt < 1:3840290/140‑1 (MQ=255) aCTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCaa < 2:6316460/140‑1 (MQ=255) aCTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCaa < 2:354924/140‑1 (MQ=255) aCTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCaa < 1:5486620/140‑1 (MQ=255) aCTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCaa < 2:5698501/140‑1 (MQ=255) cTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAAc < 2:5038259/140‑1 (MQ=255) tttCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGa < 1:4197791/140‑1 (MQ=255) tCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATCGCAATCAACTTGTTAGAAt < 2:7439685/140‑1 (MQ=255) gTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCa < 2:2264028/140‑1 (MQ=255) gATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCAt > 1:732463/1‑140 (MQ=255) gATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCAt > 1:5067607/1‑140 (MQ=255) ctctAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCAttcttc > 2:7019706/1‑140 (MQ=255) ctctAGAATCCTTAGACTTGCTTTCGCTGCTTCAGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGAAATCAACTTGTTAGACTAGGTGCGCATGTCAttcttc > 2:804073/1‑140 (MQ=255) tctAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTcc > 2:2023364/1‑140 (MQ=255) tctAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTcc > 2:3345859/1‑140 (MQ=255) cTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAACACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAg < 1:614880/140‑1 (MQ=255) cTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAg > 1:1812101/1‑140 (MQ=255) cTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAg > 1:4334342/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 1:5381980/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 2:951679/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 1:1553547/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 1:2205384/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 1:318664/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 1:3308714/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 1:3474962/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 2:5342371/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 1:632025/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 1:7003729/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 2:415861/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 2:4707182/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCAGTCTTCCTTTTTTCAGa > 1:2894345/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACCTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 1:5854607/1‑140 (MQ=255) aGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGAtt > 2:3445041/1‑140 (MQ=255) aGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGAtt > 2:4533623/1‑140 (MQ=255) aGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGAtt < 1:1468900/140‑1 (MQ=255) aCTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTa > 1:3762755/1‑140 (MQ=255) cTTGTTTTCGCTGCTTCTGCTGTTATTCTGGCTGGATGAAGAGACGGATACTATGAATCAGGCTATTATTAAAACACTCTTGATATAAATCAACTTTTTAGAATAGTTGCTCATGTGATTCTTCATTTTTTCAGATTTAg < 2:650914/140‑1 (MQ=255) gCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTaa > 2:3833460/1‑140 (MQ=255) | TTCCCACCGGCGTAATGCCGAGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAA > NZ_CP034943/803119‑803391 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |