| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 896,727 | C→A | 5.6% | H99N (CAT→AAT) | recX → | recombination regulator RecX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 896,727 | 0 | C | A | 5.6% | 918.3 / 3.9 | 352 | H99N (CAT→AAT) | recX | recombination regulator RecX |
| Reads supporting (aligned to +/- strand): ref base C (166/151); new base A (2/33); total (168/184) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.21e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 357 total aligned reads displayed.
GATTCAATACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATCGACGACGATAC > NZ_CP034943/896588‑896863 | gaTTCAATACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATcc < 1:1989513/140‑1 (MQ=255) cAATACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATaa > 2:870994/1‑140 (MQ=255) cAATACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATaa > 2:6073671/1‑140 (MQ=255) aaTCCGGCGATGAAGTAAAGAAAGCCTTCAACCGTGCGCTTGAAATTTTATCCTACCGGATGCGGTCAACGAAAGCGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCAGTGCGGAAGTCATCCATAAg < 1:871131/140‑1 (MQ=255) aaTACGGCGCTGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAg < 2:4132414/140‑1 (MQ=255) aaTACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGACAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAg < 2:6903844/140‑1 (MQ=255) aaTACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAg > 1:989501/1‑140 (MQ=255) aaTACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAg < 1:610319/140‑1 (MQ=255) aaTACGGCGATGAAGTAAAGAAAGGCTTAAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAg < 1:5882994/140‑1 (MQ=255) aCGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTg < 2:2342574/140‑1 (MQ=255) cGGCGATGAACTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTGAGCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGa < 1:3970793/140‑1 (MQ=255) ggCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGaa < 2:1728807/140‑1 (MQ=255) gCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAAc < 1:5069590/140‑1 (MQ=255) cGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAATAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACg < 2:4461769/140‑1 (MQ=255) cGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACg < 2:6860616/140‑1 (MQ=255) cGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACg < 1:803280/140‑1 (MQ=255) aTGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGACGTCATCCATAAGCTGAACGAc > 2:303826/1‑140 (MQ=255) tGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACt > 2:2374874/1‑140 (MQ=255) tGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACt > 2:3574054/1‑140 (MQ=255) tGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAACCTGAACGACt > 2:6067385/1‑140 (MQ=255) aaGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTAc < 1:2416412/140‑1 (MQ=255) aagaaagGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTa > 2:5724058/1‑140 (MQ=255) agGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTaa > 1:6383582/1‑140 (MQ=255) agGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTaa > 1:6306294/1‑140 (MQ=255) ggCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATATGCTGAACGACTACAAGTACTTaaa > 1:543903/1‑140 (MQ=255) ggCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTaaa > 1:6600208/1‑140 (MQ=255) tGCTCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAAt > 2:6240288/1‑140 (MQ=255) tGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAACGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGCCCAGGAAt > 2:1631955/1‑140 (MQ=255) tGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGACGTCATCCATAAGCTGAACGACTCCAAGTACTTAAACGACCAGGact > 2:5308730/1‑138 (MQ=255) tGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCCTAAGCTGAACGACTACAAGTACTTAAACGACCAGGact > 2:4029519/1‑138 (MQ=255) tGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACCAGTACTTAAACGACCAGGAAt > 2:6311140/1‑140 (MQ=255) tGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTCCTTAAACGACCAGGAAt > 2:2643469/1‑140 (MQ=255) tGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAAt > 2:4825814/1‑140 (MQ=255) tGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAAt > 1:6450884/1‑140 (MQ=255) tGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAAt > 2:5909807/1‑140 (MQ=255) tGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAAt > 1:2148258/1‑140 (MQ=255) tGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGGTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCAGTGCGGAAGTCATCCATAAGCTGAACGACTACGAGTACTTCCACGACCGGGagt > 1:5408943/1‑138 (MQ=255) tGCGCTTGAATGTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGCCCACTTAATGAAACAAGAAATTTCGGCGCCCGTCAGTGCGGAAGTCAGACATAAGCTGACCGACTACCAGTAGGTAAACGAcgcggact > 1:4085418/1‑133 (MQ=255) cgcTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAACTTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCCGGAAttt > 2:6520976/1‑140 (MQ=255) ttattttttATCCTACCGTATGAGGTCAACTAAAGAGGTTGTGGACCACTTAAAGAAAAAATAAATTGCGGCGCCCGGAATTGCGGAAGTCATCAATACGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCcg < 1:3330986/136‑1 (MQ=255) ttaaTTTTTATCCTACCGTTTGAGGTCAACGAAAGAGGTTGAGGACCAATTAAATAAAAAAAATTTTTCGGCGCCCGTCTTTGCGGAAGTCATCCATAAGCTTAACGAATAAAAGTACTTAAACGACCAGGAATTTGCcg < 1:7675136/138‑1 (MQ=255) ttaaTTTTTATCCTACCGTATTAGGAAAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCcg < 2:2977038/138‑1 (MQ=255) ttaaTTTTTATCCTACCGTATGAGGTAAACGAAAGCGTTTGAGTACCACTTAAATAAAAAACAATTTTCGGCGCCCGTCTTTGCGGAAGTCATCCATAAGATGAACGACTACAAGTACTTAAACGACCAGGAATTTGCcg < 1:3418111/138‑1 (MQ=255) tGATTTTTTATCCTACCGGATGAGGACAACTAAAGCGGTTGAGCACCACTTAAAGAAAAAAGAATTTTCGGCGCCCGTCATTGCGGACGTCATCCATACGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCcg < 1:3005049/140‑1 (MQ=255) tGAATTTTTATCCTACGGGTTGAGTTAAACTAAAGTGGTTGAGCACCAATTAAAGAAAAAACAATTTTCGGGGCCCGTATTTGCGGAAGTCATCCATAAGCTTAACGACTACAAGTACTTAAACGACCAGGAATTTGCcg < 1:559710/140‑1 (MQ=255) tGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCcg < 2:5061583/140‑1 (MQ=255) ggAATTTCTACCCTACCGGATGCGGTCACCCAAAGAGGATCAGCACCACTCAAACCAAAAAAAAAATTCGGCGCCCGTCATTGCGGAAGTAATCAATACCCTGAACGACTACAAGTACTTCAACGACCAGGAATTTGCcg < 1:6816051/139‑1 (MQ=255) aaTTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCcgcg > 1:1004039/1‑140 (MQ=255) ttttATCCTCCCGCAGGCGGACCCCGAACGAGGTGGAGGACCACTAAACGAAAAAACAACTGTCGGCCCCCGTCATTGGGGAAGTCATCCATCAGCGGAACGACTACACTTACTTAAACGACCAGGAATTTGCCGCGGcc < 1:2599633/140‑1 (MQ=255) ttttATCCTACCGGATGAGGTCAACTAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAGGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGcc < 2:678137/140‑1 (MQ=255) ttttATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGACAAAACAAATTTCGGCGCCCGTCATTGCGGACGTCATCCATAAGCGGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGcc < 1:5338000/140‑1 (MQ=255) ttATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTa < 2:7533149/140‑1 (MQ=255) gTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCcg > 1:1755242/1‑116 (MQ=255) gTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCcg < 2:1755242/116‑1 (MQ=255) gTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACaaaa > 1:2916859/1‑140 (MQ=255) tcgaCGAAAGAGGTCGAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTTAAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACaaaaa > 1:4762362/4‑140 (MQ=255) tCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACaaaaa > 2:3359064/1‑140 (MQ=255) gAAAGAGTTTGTGTACAAATTAAATAAAAAAGAAATTTCGGCGCCCTTCATTGCGTAATTCATCAATAAGCTGAACGAATACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAaacga < 1:58386/140‑1 (MQ=255) agagGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAaacgaacg > 1:117453/1‑140 (MQ=255) agGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGa > 2:7056179/1‑140 (MQ=255) gTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGaaa > 2:7421751/1‑140 (MQ=255) tGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATACGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAACAg > 1:3525730/1‑140 (MQ=255) tGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAAGTTGCCGCGGCCTATGTCAGCTCCCACAAAAAAACGAACGGAAAAg > 1:7508486/1‑140 (MQ=255) gAGGACCCCTTAAAGAAAAAATAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGATGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAgg < 2:1127721/140‑1 (MQ=255) ccACTTAAACAAAAAAGAAATTTCGGCGCCCGTCTTTGCGTAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTg < 2:4638013/140‑1 (MQ=255) ccACTTAAACAAAAAACAAATTTCGGCGCCCGTCATTGCGGAAGACACCAATACGCTCAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTg < 1:1072220/140‑1 (MQ=255) aCTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGAc > 2:1330611/1‑140 (MQ=255) cTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACg > 2:3747199/1‑59 (MQ=255) cTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACg > 1:1198023/1‑140 (MQ=255) cTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACg > 1:3762943/1‑140 (MQ=255) cTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACg > 2:4876005/1‑140 (MQ=255) aaaacaaaaaacaaaTTGCGGCGCCCGACATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGtt < 1:6168598/139‑1 (MQ=255) aagaaaaaacaaaTTGCGGCGCCCGTCATTGCGGAAGTCATCAATACGCTCACCGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGtttt < 1:3987274/140‑1 (MQ=255) gaaaaaagaaaTTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGt > 2:5457826/1‑140 (MQ=255) aaaaagaaaTTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTc > 1:2798438/1‑140 (MQ=255) aaaagaaaTTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCa > 2:5515129/1‑140 (MQ=255) aaagaaaTTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCag > 1:5022968/1‑140 (MQ=255) aagaaaTTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAACGGCCCTGACGTTTTGTTCaga < 2:3832811/140‑1 (MQ=255) aagaaaTTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGttt > 1:2368310/1‑132 (MQ=255) tttCGGCGCCCGTCTTTGCGGAAGACATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTg < 1:6981699/140‑1 (MQ=255) cgcCCTTCTTTGGGTACGTAAACCATAAGCTGAACTACTACAAGTACTTAAACGACCACGAATTTGCCGCGGCCTAGGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCa < 1:138981/140‑1 (MQ=255) cGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTTAAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAGAGCTAAGAGCGAAgg < 2:4762362/140‑1 (MQ=255) cGGAAGTCATCCATAACCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGACCGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgac < 2:503044/140‑1 (MQ=255) cGGAAGTAATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAACGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgac < 2:3289707/140‑1 (MQ=255) gAAGTCATCCATACGCTGAACGACTACAAGTAATTAAACGACCAGGATTTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacga < 2:5826882/140‑1 (MQ=255) gAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacga < 2:5265179/140‑1 (MQ=255) gAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacga < 2:2121801/140‑1 (MQ=255) gAAGTCATCAATACGATGAACGACTAAAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacga < 1:5243072/140‑1 (MQ=255) aaGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacgac > 1:1608121/1‑140 (MQ=255) ttcatcaATACGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacgacga < 2:714036/139‑1 (MQ=255) ttaaTCCATAAGCTCAACGACTACAATTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacgacga < 1:4825814/137‑1 (MQ=255) ttCATCCATACGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacgacga < 2:2888796/139‑1 (MQ=255) tacATCAATAAGCTGAACGACTAAAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacgacga < 1:3076617/138‑1 (MQ=255) gtaaTCCATACTCTCAACGACTACAATTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCCCAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacgacga < 1:728240/137‑1 (MQ=255) gtaaTCAATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacgacga < 1:5714737/137‑1 (MQ=255) gTCATCCATAAGCTGAACGACTACACGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAACGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacgacga < 1:6725528/140‑1 (MQ=255) gTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacgacga < 2:5128490/140‑1 (MQ=255) gTCACCAATAAGCTTAACCAATACAAGTACTTAACCGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGACCGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATcgacgacga < 1:2576643/140‑1 (MQ=255) ttCCATAAGCTGAACGACTACATGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATCGACGACGATAc < 2:6443953/139‑1 (MQ=255) aTCCATAAGCTGAACGACTACAATTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATCGACGACGATAc > 1:2966666/1‑140 (MQ=255) | GATTCAATACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTTGAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTTAAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAGAGCTGAGAGCAAAGGGAATCGACGACGATAC > NZ_CP034943/896588‑896863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |