| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 986,801 | G→T | 12.0% | D372Y (GAT→TAT) | spoVR → | stage V sporulation protein SpoVR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 986,801 | 0 | G | T | 12.0% | 925.4 / 22.2 | 408 | D372Y (GAT→TAT) | spoVR | stage V sporulation protein SpoVR |
| Reads supporting (aligned to +/- strand): ref base G (174/161); new base T (2/66); total (176/232) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.51e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 415 total aligned reads displayed.
GCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCATTGGTA > NZ_CP034943/986664‑986940 | gCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGAt > 2:7517323/1‑140 (MQ=255) tGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATTTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAtcg > 1:3734201/1‑140 (MQ=255) ggCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAtcgt > 1:1341631/1‑140 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa < 2:2744864/140‑1 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa > 2:3986171/1‑140 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa > 2:4983699/1‑140 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa > 2:6128593/1‑140 (MQ=255) aggatgggATAAAATGTTTTAGGTATGGGAAATTGAATCCGATATCTCTTTCATCCGAAATTACTTAACAAAAGAATTAGTTATGCGCGTGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa < 1:4380357/135‑1 (MQ=255) ggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaa > 1:491121/1‑140 (MQ=255) ggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaa > 2:5949484/1‑140 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAACACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:4169708/1‑140 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa < 1:101460/140‑1 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:6365165/1‑140 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:5866048/1‑140 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAt > 1:6227065/1‑140 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAt > 1:7482443/1‑140 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAt > 2:6759164/1‑140 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAt > 2:2579613/1‑140 (MQ=255) tCAGGGCAATTGCAGCCGATATCTCTTTCCTCCGCAAGTACTTACCAACAGACTTAGTTAGGCGCGAGGATCTTTATTTGTGTCAACAACAGGGCAGAGATTATAAAATCGTCGACAAATAATGGAAATCGGTACGAGAc < 2:1372281/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:1548151/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:5393805/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:6583188/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:5838313/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:5695778/140‑1 (MQ=255) cAGGTAAATTGAAGCCGATATCTCTTTCATACGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAcc < 2:6407520/140‑1 (MQ=255) gggAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAg < 2:2066429/140‑1 (MQ=255) aTTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGt < 1:1814530/140‑1 (MQ=255) ttGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTg > 1:3397687/1‑140 (MQ=255) ctCCGATATCTCGTTCATCCGCAATTACTTAACAAAAGACGTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGACTGGAAATCGGGACGCGACCAGCTCGTGAGCa < 2:693364/139‑1 (MQ=255) aTCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCa < 1:1404102/140‑1 (MQ=255) ccGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATg < 2:6258728/140‑1 (MQ=255) ccGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATg < 1:4784465/140‑1 (MQ=255) tatCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCggg < 2:3195711/140‑1 (MQ=255) ctctTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACCAAGAATGGAAATAGGTACGCGACCAGCTCGGGAGCGTGCGGGTaa > 2:6358690/1‑140 (MQ=255) ctTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCCGATATTATAAAATCGTCGACACAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAAc > 1:3103511/1‑140 (MQ=255) ctTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGGACTCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAAc > 2:1897819/1‑140 (MQ=255) ctTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAAc > 2:6513744/1‑140 (MQ=255) tCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAAcggc < 2:3232013/140‑1 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt < 1:3025516/140‑1 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt < 2:3799875/140‑1 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt < 1:5440128/140‑1 (MQ=255) cAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTc > 2:4742002/1‑140 (MQ=255) aaTTACATAACAAAACACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTcc < 2:2301034/140‑1 (MQ=255) cTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATAtt < 1:535002/140‑1 (MQ=255) gACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAATAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACAGCGGGTTTCCATATTTGACAGTaaa > 1:7552875/1‑140 (MQ=255) gACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGACATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTcaa > 2:3346561/1‑140 (MQ=255) gACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTaaa > 2:1222050/1‑140 (MQ=255) aCTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAac > 2:5217491/1‑140 (MQ=255) ttttttttGCGCTAGTATATTTTTTTGTTAAAAAAAATGGGCAGTTTTTATAAAATCTTCGAAAAAGAATGTAAATCGGTCCGCGACCAGATCGTGAGCTTGCGGGTAACCGGCGGGTTTCCATATTTGACAGTACacga < 1:7662571/133‑1 (MQ=255) aGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGt > 1:1207866/1‑116 (MQ=255) aGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAacgacg > 1:97054/1‑140 (MQ=255) gcgcGAGTATATTTATTTTTTAAAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGAtt < 2:4489393/140‑1 (MQ=255) gcgcGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCa < 1:3776716/92‑1 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTa > 1:6478342/1‑140 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTa > 2:2238532/1‑140 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTa > 1:7194677/1‑140 (MQ=255) aGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACTACGGTGATTACATg > 2:479640/1‑140 (MQ=255) tttttttTAAAAAACTGGGCTTATATTATAAAATCGTCTAAAAAGATTGGAATTGGGTACGCGACCAGCTCGTTAGCATGGGGGTAAACGGGGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:5107742/139‑1 (MQ=255) tttttttTAAAAAACTGGGCAGATATTATAAAATGGTCGAAAAAGATTGTAAAGCGTTAGGCGACCAGCTCGTGCGATTGCGGGTAACCGGGGGTTTTCCATATTTGACTGTACACGACGGTGATTACATGAAAAATAAc < 1:1123438/139‑1 (MQ=255) ttttGTTTCAAAAACTGGGCAGAGTTTATAAAATCGTCGACAAAGAATGTAAATCGGTACGCGACCAGCTCGTGAGAATGCGGGTAAACGGCGGGTTTCCATTTTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:357198/139‑1 (MQ=255) ttttGTTACAAAAACTGGGAATATTTTATAAAATCGTCGACAAATAATGGAAATCGGTACGCGACCAGCTGGTGAGCATGCGGTTAAACGGGGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:7380043/139‑1 (MQ=255) aTTTTTTTAAAAACCAGGGCAGAGATTATAAAATCGTCGAAAAATAATGGAAATCGGTACGCCACCAGCTCGTGAGAATGCGGGTAAAGGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:6106311/140‑1 (MQ=255) aTTTTTATCAAAAACAGGTCAGACATTATAAATTCGACGACAAAGAATGTAATTGGGTACGCCAACAGATCGTTAGAATGCGTGTAAACGGAGGGTTTCAATATTTCACCTTAAACGACGGTGATTACATGAAAAATAAc < 1:3539741/140‑1 (MQ=255) aTTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:7265655/140‑1 (MQ=255) aTTTGTTTAAAAAACAGGGCCGATATTTTAAAATCTTCCACAAACAATGTAAATGGGTCCGCTCCAATCTGGTGAGCTGGGGGGTAAAGGGGGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:4983699/140‑1 (MQ=255) ttttCAAAAACAGGGCTGATATTATAAAATCGTCGACAAATATTGTAAATGGGTACGCGACCAGCTCGTGAGAATGCGGTTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc < 2:765803/139‑1 (MQ=255) ttttCAAAAAATGGGACGATTTTATAAAATCTTCTACAAACAAGGTAATTCGTTCCGCCACAAGCTCTTGTGCAGGGGGTCAAACGGCGGGTTTCAATATTTCACAGTAAACGACGGTGATTACATGAAAAATAACGAGc < 1:4528068/139‑1 (MQ=255) ttttCAAAAAAAGGGCATAGATTATAAAATCTTCGACAAATAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc < 2:4296623/139‑1 (MQ=255) ttttAAAAACCAGGCCCCAGATTATAAAATCGTCCACAAAGACTGCAAATCGGTACGCCACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCCATATTTCACAGTAAACGACGGTGATTACATGAAAAATAACGAGc < 2:2914366/139‑1 (MQ=255) gTTTAAAAAACAGGGCAGAGATTATAAAATCGTCGACAAATATTGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGGGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc < 2:1128619/140‑1 (MQ=255) tttCAAAAACAGGTCAGATATTATAAATTCTTCTAAAAAAAATGTAAATCGGTACGCTACCAGCTCGTTAGCATGCGGTTAAACGCCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:903195/140‑1 (MQ=255) tttCAAAAACAGGGCATATATTATAAAATCTTCGACAAAGAATGTAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACATTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:2354153/140‑1 (MQ=255) tttCAAAAACAGGGCAGATATTATAAAATCGTCGACAAATAATGTAAATCGGTACGCGACCAGCTCGTGAGAATGCGGTTAAACGGGGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:2156213/140‑1 (MQ=255) tttCAAAAACAGGGCAGATATTATAAAATCGTCGACAAAGATTGTAAATCGGTACGCGACCAGCTCGTGAGCTGGGGGGTAAACGGCGGGTTTCATTATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:7020748/140‑1 (MQ=255) tttCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:4169708/140‑1 (MQ=255) tttCAAAAACAGGGCAGAGATTATAAAATCGTCGAAAAAGATTGGAAATGGGTACGCGACCAGCTCGTGAGCATGGGGGTAAACGGCGGGTTTCCATATTTTAAAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:5468141/140‑1 (MQ=255) tttCAAAAACAGGGAAGAGATTATAAAATCGTCGACAAAGACTGTAAATGGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGTGTTTCCATATTTGACAGGAAACGACGGTGATTACATGAAAAATAACGAGct < 2:3641820/140‑1 (MQ=255) tttCAAAAACAGGCCAGATATTATAAAATCGTCGACAAAGATTGTAATTCGGTCCGCCACAAGCTCGTGCGCAGGCGGGTAACCGGCGGGTTTCCATATTTGACAGTACACGACGGTGATTACATGAAAAATAACGAGct < 1:6635142/140‑1 (MQ=255) tttAAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATGGGTACGCGACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:7403813/140‑1 (MQ=255) ttaaaaaaaaCGGGCATATATTATAAAACCGCCGACAAATATTGCAAATCGGTACGCGACCAGCTGGTGAGCATGCGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:2276338/136‑1 (MQ=255) ttaaaaaaaCTGGGCAGTCTTTATAAAATCGTCGAAAAATATTGCAAATCGGTACGCGACCAGCTCGTGAGATTGCGGGTAACCGGCGGGTTTCAATATTTGACAGTACACGACGGTGATTACATGAAAAATAACGAGct < 1:2480558/136‑1 (MQ=255) ttaaaaaaaCAGGGCAGATATTATAAAATGGTCCAAAAATATTGTAAATGGGTACGCGACCAGATGTTGCGCATGGGGTTAAACGGCGGGTTTCATTTTTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:2805726/136‑1 (MQ=255) tgtCAAAAACCGGGCATCGATTATAAAATCGTCGACAACGAATGTAAATCGTTCCCCGACCAGCTGGTGAGCATGCGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGACAAATAACGAGct < 2:954312/138‑1 (MQ=255) taacAAAAACAGGCCAGCTATTATAAAACCGACCACAAATAATGCAATACGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGTTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:3937676/137‑1 (MQ=255) gtccAAAACCCGGGCAGAGATTCAACAAGCGTCGACCAAGACTGGAAATGGGTACGCGCCCAGCTCGTGTGAATGCGGGTAAACGTCGGGTTTCCATATTTGACTGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:6882329/137‑1 (MQ=255) ttCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAACTAACGAGctc > 1:6428726/1‑140 (MQ=255) ttCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGCGTTTCCATATTTGACAGTAAACGACGGTGATTAAATGAAAAATAACGAGctc > 1:6757773/1‑140 (MQ=255) tCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGctct > 2:3092849/1‑140 (MQ=255) cgacaggggAAGATATTATAAAATCGTCCACAAATAATGGAAATCGTTACGCGACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCtata < 2:162029/134‑1 (MQ=255) aaCTGGGCAGCTATTATAAAATCGTCTAAAAAGAATGCAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATAtt < 1:5949484/140‑1 (MQ=255) aaCCGGGCAGATATTATAAAATCTTCGACAAAGAATGTAAATCGGTACGCGACCAGATCGTGAGCATGCGGGTAAACGGGGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATAtt < 1:1904779/140‑1 (MQ=255) aaCAGGGCAGATATTATAAAATCGTCTACAAAGATTGGAAATCGGTAGGCGAACAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCCATATTTTACAGTAAACGACGTTGATTACATTAAAAATAACGAGCTCTATAtt < 2:5088720/140‑1 (MQ=255) aaCAGGGCAGAGATTATAAAATCGTCGACAAATAATGTAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGTGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATAtt < 2:456587/140‑1 (MQ=255) aaCAGGGCAGAGATTATAAAATCGTCGACAAAGAATGCAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAAGGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATAtt < 2:491121/140‑1 (MQ=255) actgggCAGAGTTTATAAAATCGTCCACAAACACTGGAACTGGTTAGGCGACACGCTGGTGCGCTTGCGGGTAACGGGGGGTTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTa < 1:158056/137‑1 (MQ=255) aCATGGAAGTGATTATAAACTCGTCGACAAAGAAGGGAAATCGGTACGCGACCTGATCGTCAGCATCCGGGTAAAGCCCGGGTTTCCATATTTGACTGTACCCGACGGTGATTACATCAAAAATAACGAGCTCTATATTa < 1:5538467/140‑1 (MQ=255) ctgggCAGATATTATAAAATCGTCCACAAATAATGCAAATGGGTAGGCGACCAGCTGGTGAGCATGGGGTTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTaa < 1:152262/138‑1 (MQ=255) ggCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCa > 2:6206632/1‑140 (MQ=255) gccAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCa < 2:7095751/138‑1 (MQ=255) gCAGATTTTATAAAATCGTCGACAAAGAATGGAAAGGGGTACGCGACCAGCTGGTGAGCTTGCGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCAt < 1:7323536/140‑1 (MQ=255) | GCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCATTGGTA > NZ_CP034943/986664‑986940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |