| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 131,088 | C→A | 100% | S194Y (TCT→TAT) | fusA → | elongation factor G |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 131,088 | 0 | C | A | 99.7% | 3239.0 / ‑3.0 | 873 | S194Y (TCT→TAT) | fusA | elongation factor G |
| Reads supporting (aligned to +/- strand): ref base C (4/3); new base A (392/473); total (397/476) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 879 total aligned reads displayed.
TAGGAACTTTAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTCTGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCACGATTGACGAG > NZ_CP034943/130950‑131224 | ttAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCCATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaa > 2:5822235/1‑140 (MQ=255) ttAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaa > 1:5806165/1‑140 (MQ=255) ttAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTAGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaa > 2:2650886/1‑140 (MQ=255) aaGAGACCGTCTTCAATCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTACAAAACCTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaag > 1:1514325/1‑140 (MQ=255) agagACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga < 1:5882044/140‑1 (MQ=255) agagACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga < 1:1651177/140‑1 (MQ=255) agagACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga < 1:6837168/140‑1 (MQ=255) agagACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga < 1:7234095/140‑1 (MQ=255) agagACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga < 1:421359/140‑1 (MQ=255) cGTCTTCAAGCAAACGCTCATGCAATTCCATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATccc > 1:5316062/1‑140 (MQ=255) cGTCTTCAAGCAAACGCTCATGCAATTCACTTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATccc > 1:5513118/1‑140 (MQ=255) cGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga > 2:3562374/1‑134 (MQ=255) cGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga < 1:3562374/134‑1 (MQ=255) cGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATccc > 2:866374/1‑140 (MQ=255) cGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATccc > 1:1922549/1‑140 (MQ=255) cGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATccc > 2:7144720/1‑140 (MQ=255) gTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCt < 2:4227708/140‑1 (MQ=255) gTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCt < 2:3080244/140‑1 (MQ=255) tCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTg > 2:1527186/1‑140 (MQ=255) ttCAAGCAACCGCACATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCTTATTTATACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGaa < 1:4934968/140‑1 (MQ=255) ttCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGaa < 2:1730725/140‑1 (MQ=255) ctCAAGCAAACGGTCATGCACTACACTTGCCGAACGGAGCTTAGGACAACTTCGAAGGTATCATCGTCCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGATCTCGTTATGATGCGAAAGAAATCCCTGaa < 2:5720740/139‑1 (MQ=255) tCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 1:1283625/140‑1 (MQ=255) tCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 1:408661/140‑1 (MQ=255) tCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 1:3132671/140‑1 (MQ=255) tCAAGCAAAAGCTCATGCAATTCAATTCCCGATCTGTGCTGAGGACAACTTCGAAGGTATGATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTAGTTATGATGCGAAAGAAATCCCTGAag < 1:1806519/140‑1 (MQ=255) tCAAGAAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTATACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 2:5281641/140‑1 (MQ=255) acaCGCGCATGCAATACACGTGCCGATCGGTGCTGAGGACAACCTCGAAGGTATCAACGACCTTGTAGAACACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAACAGTACa < 2:6368035/138‑1 (MQ=255) aaaCGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAACACGGTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACa < 1:6593553/140‑1 (MQ=255) aaaCGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACa < 1:385708/140‑1 (MQ=255) cGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 1:3467862/131‑1 (MQ=255) gCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGCAAGAAATCCCTGAAGAGTACAAaga < 2:4724923/140‑1 (MQ=255) gCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAaga < 1:272863/140‑1 (MQ=255) gCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAaga < 2:4544942/140‑1 (MQ=255) tCATGCAATTCAAGTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGc < 2:1143271/140‑1 (MQ=255) aTGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACCAAGAGCaa > 2:4066841/1‑140 (MQ=255) ttcaattGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATcc > 2:1278680/1‑114 (MQ=255) ttcaattGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGaa > 1:1174146/1‑140 (MQ=255) ttcaattGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGaa > 2:6249068/1‑140 (MQ=255) ttcaattGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGaa > 1:5198110/1‑140 (MQ=255) ttcaattGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGaa > 1:4767749/1‑140 (MQ=255) tcaattGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAag < 1:6685236/140‑1 (MQ=255) tcaattGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAag < 1:2145418/140‑1 (MQ=255) caattGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAaga < 2:3950646/140‑1 (MQ=255) aTCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCaa < 1:2600234/140‑1 (MQ=255) gttcTGAGGAAAACTTCGAAGGTATCATCGAACTTGTACAAAACGTTTAGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAATAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGc < 2:1956942/137‑1 (MQ=255) gTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGc < 1:6345074/140‑1 (MQ=255) gTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGc < 1:5680398/140‑1 (MQ=255) gTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGc < 1:3647067/140‑1 (MQ=255) gTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGc < 1:4348131/140‑1 (MQ=255) aGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCAtt > 1:463218/1‑140 (MQ=255) cAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAg < 2:285813/140‑1 (MQ=255) cAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAg < 1:7456240/140‑1 (MQ=255) aaCTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGTAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGc > 2:751287/1‑140 (MQ=255) aaCTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGc > 1:969269/1‑140 (MQ=255) aaCTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGc > 1:7666508/1‑140 (MQ=255) aaCTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGc > 2:1221538/1‑140 (MQ=255) aaCTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGc > 1:2334104/1‑140 (MQ=255) aaCTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGc > 2:4313128/1‑140 (MQ=255) aaGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTtgt < 1:2015502/140‑1 (MQ=255) tATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGc < 2:2086094/140‑1 (MQ=255) tATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGc < 2:3767287/140‑1 (MQ=255) tcatcGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 2:7219576/81‑1 (MQ=255) tcatcGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCtt > 1:2880373/1‑140 (MQ=255) tcatcGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCtt > 1:2958198/1‑140 (MQ=255) cGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTtgatg < 2:3436155/140‑1 (MQ=255) aCCTTTTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGATATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGATTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGaa < 2:3224248/140‑1 (MQ=255) aCCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGTAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGaa < 2:6127671/140‑1 (MQ=255) aCCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGaa < 2:4829316/140‑1 (MQ=255) aCCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGaa < 2:3358839/140‑1 (MQ=255) ccTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 2:2217043/74‑1 (MQ=255) tGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAagaga > 2:5570775/1‑139 (MQ=255) tGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGACGAGc > 2:5054324/1‑140 (MQ=255) tGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGc > 2:7026426/1‑140 (MQ=255) tGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGc > 2:6868467/1‑140 (MQ=255) tGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGc > 1:6429576/1‑140 (MQ=255) tGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGc > 2:2364742/1‑140 (MQ=255) gTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCt > 1:3973281/1‑140 (MQ=255) aGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa < 2:2958198/140‑1 (MQ=255) aGAAAACGTTGCGTATGTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa < 1:4568494/140‑1 (MQ=255) aaCGTTGCGTATTTCTACGAAGATGACCTCGGAACTGGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCACGCTGAAGAGCTTCGCACCAGCGTCATTGATGCTGTGTGTGAGCTTGATGACGAGCTTCTggc > 1:1026896/1‑139 (MQ=255) aaCGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGa > 2:7602755/1‑140 (MQ=255) aaCGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGa > 1:6177498/1‑140 (MQ=255) aaCGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGa > 1:1400485/1‑140 (MQ=255) aaCGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGa > 2:144813/1‑140 (MQ=255) aaCGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTGTGTGAGCTTGATGAAGAGCTTATGGa > 1:7298034/1‑140 (MQ=255) cGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATa < 2:5477521/140‑1 (MQ=255) cGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATa < 2:2545109/140‑1 (MQ=255) tGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAag > 1:7565227/1‑80 (MQ=255) tGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAAt > 1:6099949/1‑140 (MQ=255) tACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAggg > 1:2462717/1‑140 (MQ=255) cGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTg < 2:643790/140‑1 (MQ=255) aTGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTgaagaa > 2:1833357/1‑140 (MQ=255) aTGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTgaagaa > 1:3302397/1‑140 (MQ=255) gACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAAt < 2:5937128/140‑1 (MQ=255) cTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCAc > 1:227034/1‑140 (MQ=255) gAACTCGTTATGATGCTAAAGAAATCCCTGACGAGTACAAACAGAAAGCTGAAGAGCTTCGCAACAGCCTCATTCAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGTGTGAAGAAATCACGAtt > 1:5030708/1‑140 (MQ=255) agtCGTTATGATGCGAAATAAATGCCTGAAGAGTACAAAGATAAAGCTGAAGAGCTTCGAAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCACGATTGa < 2:6577234/138‑1 (MQ=255) cTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCACGATTGAc < 1:4455626/140‑1 (MQ=255) gTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCACGATTGACGAg > 1:7081085/1‑140 (MQ=255) | TAGGAACTTTAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTCTGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCACGATTGACGAG > NZ_CP034943/130950‑131224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |