| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,582,930 | C→A | 9.9% | H41N (CAT→AAT) | ylyA → | sporulation‑related RNA polymerase‑binding protein YlyA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,582,930 | 0 | C | A | 9.9% | 934.3 / 16.2 | 398 | H41N (CAT→AAT) | ylyA | sporulation‑related RNA polymerase‑binding protein YlyA |
| Reads supporting (aligned to +/- strand): ref base C (204/139); new base A (3/52); total (207/191) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.64e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 437 total aligned reads displayed.
AGAGCAGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCAAAGCTTGCTGT > NZ_CP034943/1582791‑1583069 | agagCAGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCaatcaatc > 1:5012991/1‑140 (MQ=255)agagCAGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCaatcaatc > 1:1741288/1‑140 (MQ=255)agagCAGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCaatcaatc > 1:1939115/1‑140 (MQ=255) agCAGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTATTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCAt < 1:864275/140‑1 (MQ=255) gCAGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATa < 1:6380787/140‑1 (MQ=255) aGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATaaa > 2:6233260/1‑140 (MQ=255) gAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATaaaaa > 2:7316028/1‑138 (MQ=255) gtgATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAATCCCGCTCGCAGCAATCAATAATAAACAAagag > 2:4937840/1‑140 (MQ=255) gtgATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACaaaaac > 1:4503612/1‑139 (MQ=255) gtgATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAg > 2:2868455/1‑140 (MQ=255) aatgaatgaTCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCAGCAAGCAGCAATCAATCATAAACAAAAAGCAActc > 2:870232/1‑140 (MQ=255) aatgaatgaTCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTAAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAActc > 1:6045741/1‑140 (MQ=255) tgaatgaTCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTg > 2:5535305/1‑140 (MQ=255) aatgaTCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGAt > 2:4809887/1‑140 (MQ=255) aatgaTAAACTGACCGAAATATATACGGAACTTCTTCTGACTAAAGAATAATTACAGTCGAGTTTATTTGAGTATTCTTGCTTTCAGGCTTCAACACGCCCGAAAGCAGAAATAAATCATAAACAAAAAGCAACTCTGAt < 2:6789619/140‑1 (MQ=255) gctCAACTCACCGCAATATTCACGTAACTTATTCTGCCTAACTAAGAATTACAGTCGAGATAATTTGATTATTCTTGCTTTCAGGCTTAAACAAGCCCGCAAGCACAAATAAATCATAAAAAAAAAGCAACTCTGATCTa < 1:1025750/138‑1 (MQ=255) gaTCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTa > 2:7062568/1‑140 (MQ=255) aacAACTGACCGCAATATATCGGGAACTTCTTCTGACCAACGAAGAATTACAGTCGCTATTATTTGAGTTTTCTTGCTTTCTGGCTTCAACACGCCCGCACGCAGCAATCAATCAAAAACAAAAAGCAACTCTGATCTAt < 1:7505457/138‑1 (MQ=255) aaaaaCTCACCGAAATATATACGGAACTTCTTCTTACTAAAGAATAATTACATTCTAGTTTATTTGAGTATTCTTGCTTACCGGATTCAACACGCCCGCAAGCAGCAATCAATAATAAAAAAACAGCAACTCTGATCTAt < 1:7592843/137‑1 (MQ=255) aTCAACTGACCGCAATATATCCGGAACTTCTTCTGACGAAACAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTAt < 2:2154313/140‑1 (MQ=255) aTCAACTGACCGCAATATATACGTAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTTTTTTAGTATTCTTGCTTTCAGGCTTAAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTAt < 2:1286049/140‑1 (MQ=255) cAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATca > 2:412066/1‑140 (MQ=255) cAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATca > 2:7582004/1‑140 (MQ=255) aaaCTGACCTCAATATATCCTGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTTTTCTTGCTTTAAGGCTTCACCAAGCCCGCAAGATGCAATCAATCATAAACAAAAAGCAACTCTGATCTATca < 2:5011948/139‑1 (MQ=255) aCTGACCGAAATATATACCGAACTCCTACTGACTAAATAACAATTACAGTCGAGATTATTTTAGGATTCTTGCTTTCAGGCTTCAACACGCCCGCACCCAGCAATCAATAAAAAACAAAAAGCAACTCTGATCTATcaca < 1:6655076/140‑1 (MQ=255) aCCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTaa > 1:7037727/1‑140 (MQ=255) aCCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTaa > 1:140797/1‑140 (MQ=255) aCCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTaa > 1:5213262/1‑140 (MQ=255) aCCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTaa > 1:2515159/1‑140 (MQ=255) cGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaag > 1:4673040/1‑140 (MQ=255) cAATATATACGGAACTTCTTCTGACGAAAGAATAATTACTGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaagaa < 2:7448567/140‑1 (MQ=255) cAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACATTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGAAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaagaa < 2:1378111/140‑1 (MQ=255) cAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGATTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGAAATCAATAATAAACAAAAAGCAACTCTGATCTATCACATTAaagaa < 2:1982114/140‑1 (MQ=255) cAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaagaa < 2:5570067/140‑1 (MQ=255) cAATATATACGCAACTTCTTCTGACGAAAGAATAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaagaa < 2:3406845/140‑1 (MQ=255) aaTATATCGGTAACTTCTACTGACTAAAGAATAATTACTGTCTATTTTATTTGTGTTTTCTTGATTTCAGGCTTAAACACGCCCGAAAGCAGCAAAAAATCATAAAAAAAAAGCAACTCTGATCTATCACATTAaagaag < 1:6805846/140‑1 (MQ=255) aaTATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaagaag < 2:3965091/140‑1 (MQ=255) aaTATAGCCGGAAATTCTTCTGAGGAAAGAAGAATTACAGTCGTGTTTATTTGAGTATTCTTGGTTTCAGGCTTAAACAAGCCCGCAAGCAGCAATAAATATTAAACAAAAAGCAACTCTGATCTATCACATTAaagaag < 2:4470915/140‑1 (MQ=255) ataCGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTCTTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCtt > 2:2502029/1‑140 (MQ=255) ataCGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCtt > 1:5536026/1‑140 (MQ=255) ataCGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCtt > 2:2739194/1‑140 (MQ=255) taCGGAACTTCTTCTTACTAAAGAATAATTACAGTCGTTTTTTTTTTATTTTTCTTGATTTCAGGCTTCAACACCCCCGCACGCAGCAATCAATCATAAAAAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTc < 1:539628/140‑1 (MQ=255) aCGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCa > 2:1827222/1‑140 (MQ=255) aCGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCa > 2:4597719/1‑140 (MQ=255) ggAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATAATTTGAGTATTATTGCTTTCAGGCTTCAACAAGCCCGAAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATATATCACATTAAAGAAGAGCTTCaat > 1:3090064/1‑139 (MQ=255) ggAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGAGTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAg > 1:3608719/1‑140 (MQ=255) gaccttcttCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAaagaa < 2:429157/126‑1 (MQ=255) gAACTTCTTCTGACGAAAGAAGCATTACATTCGAGATTATTTGAGTATTCTTGCTTTCATGCTTCAACAAGACCGCAAGCAGCAATCAATCATAAACAAAAAGAAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGa > 1:4078656/1‑140 (MQ=255) gAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCAGATTAAAGAAGAGCTTCAAGa > 1:6906339/1‑140 (MQ=255) gAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGa > 1:5965877/1‑140 (MQ=255) gAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGa > 2:2344601/1‑140 (MQ=255) gAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGa > 1:2190244/1‑140 (MQ=255) aattcttcTGACGAAAGAATAATTACAGTCGAGATTATTTTAGTATTCTTGCTTTCAGGCTTCAAAAAGCCCGCAAGCAGCAAACAATCATAAACAAAAAGCAACTCATATATATAACAATAAAGAAAAGCTTAAAGACg > 2:5722224/3‑140 (MQ=255) aCTTCTTCTGACGAAAGAAGAATTACAGTCGAGA‑TATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAACAAGAGCTTCAAGACGt > 2:3066027/1‑140 (MQ=255) cttcttCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGt > 2:375704/1‑140 (MQ=255) ttcttcTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGtt > 2:6946048/1‑140 (MQ=255) ttcttcTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATGAAAGAAGAGCTTCCAGACttt > 2:5341750/1‑140 (MQ=255) cttctGACGAAAGAAGAATTACCGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTtct > 2:6462459/1‑140 (MQ=255) tctGACCTAACAATAATTACCGTCTAGATTATTTGAGTATTCTTGATGTCAGGTTTCAACACGCCCGCACGAAGAAATCAATAATAAAAAAAACGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTctcc < 1:474669/140‑1 (MQ=255) gACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCg > 2:7650692/1‑140 (MQ=255) gACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCg > 1:2714358/1‑140 (MQ=255) ccaaaGAAGATTTACTTGCTAGTTTATTTGATTATTCTTGTTTTCAGGCTTCAACAAGCCCGAAAGCAGCAATCAATAATAAAAAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCa < 1:2945236/138‑1 (MQ=255) cGAAAGAAGAATACCACTCCCGATTATTTGAGTATTGTTGCTATCAGGCTCAAACCACCCCGCAAGCAGCAAACACTAATAAACAAAAAGCAACGCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCa < 1:6610788/140‑1 (MQ=255) aagaagAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATTACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTg > 1:4936241/1‑140 (MQ=255) agaagaATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGt > 2:320624/1‑140 (MQ=255) acaaTTACATTCCAGATTTTTTGATTATTCTTGGTTACAGGCTACAACACCCCCGCACGCACCAATAAATAATAAACAAAACGCAACTCTGATCTATCACATTAAAGAATAGCTTCAAGACGTTCTCCTCGCATTGTCCa < 1:965728/138‑1 (MQ=255) agtttttttGATTTTTGTTGATTTCTGGATTCAACACGCCCGCCAGCAGCAATAAATAATAAAAAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACgg < 1:1538924/134‑1 (MQ=255) tttattTGATTATTCTTGCTTTCCGGCTTCAACAAGCCCGCACGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTa < 1:1644106/139‑1 (MQ=255) attattTGAGTATTCTTGCTTTCAGTCTTCAACAAGCCCGCAACCAGAAATCAATCATAAACAAAACGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTa < 1:113584/140‑1 (MQ=255) attattTGAGTATGCTTGCTTTAAGGCTTCAACAAGCCCGCAAGCAGCAATCACCCAGAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTa < 2:3490519/140‑1 (MQ=255) gAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCgg < 2:6605704/140‑1 (MQ=255) gAGTATTCTTGCTTTCAGGATACAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCgg < 2:3285713/140‑1 (MQ=255) tATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATa > 2:7140458/1‑140 (MQ=255) tATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATa > 1:3704278/1‑140 (MQ=255) aTTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATAc < 1:2787997/140‑1 (MQ=255) aTTCTTGCTTTAAGGCTTCAACAAGCCCGCAAGCAGCAATCAATAATAAAAAAAACGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATAc < 1:1312488/140‑1 (MQ=255) ttCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACt > 1:3910935/1‑140 (MQ=255) ttCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACt > 1:6519895/1‑140 (MQ=255) cTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGc > 2:4889984/1‑140 (MQ=255) tGCTTTAAGGCTCCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGGTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCga < 2:163437/140‑1 (MQ=255) cTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCgaag > 1:3477710/1‑140 (MQ=255) cTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCgaag > 2:6845240/1‑140 (MQ=255) ttCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGaa < 2:4423798/113‑1 (MQ=255) ttCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGaa > 1:4423798/1‑113 (MQ=255) aGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACt > 2:5929106/1‑140 (MQ=255) gCTTCAACAAGCCCGCAAGAAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTgg < 2:6038937/140‑1 (MQ=255) ttCACCACGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTAGCACATTAAAGACGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTgggg < 1:402548/140‑1 (MQ=255) ttCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTgggg < 2:2596849/140‑1 (MQ=255) gCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCATGACGTTCTCCTCGCATTGTCCAAAATCGAAAACCGTACATACGGATACTGCGAAGAAACTGGGGCTCCCAtg > 2:523783/1‑139 (MQ=255) gCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCAtt > 2:1107651/1‑140 (MQ=255) cAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCt > 1:5739237/1‑140 (MQ=255) cAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTAAATTCGGCTACTGCGAAGAAACTGGGGCTCCCATTCACCt > 1:6236876/1‑140 (MQ=255) aagacgcaATAAATCATAAAAAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGGTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCtt < 1:3253744/135‑1 (MQ=255) aaGCAGCAATCAATAATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCtt < 2:3841622/140‑1 (MQ=255) gcaATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGGTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCaaa < 2:2219808/140‑1 (MQ=255) ccaatcaatAATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCaaa < 2:2070038/139‑1 (MQ=255) caatcaatCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCAAAg > 2:1520017/1‑140 (MQ=255) atcaatcaTACACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCAAAGCt > 1:7101376/1‑140 (MQ=255) caatcaTAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCAAAGCTtg < 1:4204104/140‑1 (MQ=255) aaatcaTAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCACAGCTtg < 1:2646962/139‑1 (MQ=255) | AGAGCAGGAGTTGTGATGAATGAATGATCAACTGACCGCAATATATACGGAACTTCTTCTGACGAAAGAAGAATTACAGTCGAGATTATTTGAGTATTCTTGCTTTCAGGCTTCAACAAGCCCGCAAGCAGCAATCAATCATAAACAAAAAGCAACTCTGATCTATCACATTAAAGAAGAGCTTCAAGACGTTCTCCTCGCATTGTCCAAAATCGAAAACGGTACATTCGGATACTGCGAAGAAACTGGGGCTCCCATTCCCCTTTCAAAGCTTGCTGT > NZ_CP034943/1582791‑1583069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |