| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,591,355 | T→G | 11.1% | W360G (TGG→GGG) | carB → | carbamoyl‑phosphate synthase (glutamine‑hydrolyzing) large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,591,355 | 0 | T | G | 11.1% | 1112.3 / 27.4 | 469 | W360G (TGG→GGG) | carB | carbamoyl‑phosphate synthase (glutamine‑hydrolyzing) large subunit |
| Reads supporting (aligned to +/- strand): ref base T (203/194); new base G (2/70); total (205/264) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.82e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 472 total aligned reads displayed.
ACAGGATATCCGATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTGGAAGCGGATGTGTA > NZ_CP034943/1591217‑1591491 | aCAGGATATCCGATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTg < 2:3939385/140‑1 (MQ=255) cAGGATATCCGATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTgg > 2:1279960/1‑140 (MQ=255) atgATATCCGATGGCAAAGCTCGCTGCTAACATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACACGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGc < 2:4283565/138‑1 (MQ=255) aGGATATCCGATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGATAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCAAAAATTCCGCGCTGGc < 2:1587086/140‑1 (MQ=255) aGGATATCCGATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGc < 2:4018273/140‑1 (MQ=255) cGATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGAt < 1:6455300/140‑1 (MQ=255) cGATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGAt < 1:4332004/140‑1 (MQ=255) cGATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCATTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGAt < 1:3807939/140‑1 (MQ=255) cGATGGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGAt < 1:3972290/140‑1 (MQ=255) gATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGTCTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGAt < 2:6092360/139‑1 (MQ=255) gATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGAt > 1:4451291/1‑139 (MQ=255) aTTGCAAAGCTCGCTGCTAAAATTGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATaa > 2:4779371/1‑140 (MQ=255) aTTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATaa > 2:4563253/1‑140 (MQ=255) tGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCGGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGt > 1:4631601/1‑140 (MQ=255) tGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGt > 2:1373503/1‑140 (MQ=255) tGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGt > 2:7589984/1‑140 (MQ=255) tGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGt > 1:3390308/1‑140 (MQ=255) aaGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGa > 2:3608981/1‑140 (MQ=255) gctgctAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGc < 1:2146887/140‑1 (MQ=255) ctgctAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCa < 1:3479131/140‑1 (MQ=255) gCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCATACAGAACGCt > 1:3864853/1‑140 (MQ=255) gCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCt > 2:5641857/1‑140 (MQ=255) tGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCg > 1:2709657/1‑140 (MQ=255) tGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCg > 1:7167982/1‑140 (MQ=255) tGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCg > 1:1947375/1‑140 (MQ=255) gCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACg < 1:1279960/140‑1 (MQ=255) tCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAAt > 2:2509580/1‑140 (MQ=255) cATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATg < 2:3873738/140‑1 (MQ=255) ttAGTTGAAATGATGAACCCGGTGACAGGAAAAACATATGCACCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAATTTTGAATCAGAAAACAGAAAGCTCGGCACGAAAATGaa < 2:1687803/140‑1 (MQ=255) gATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGAt < 2:6252973/96‑1 (MQ=255) aTGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCg > 2:21930/1‑140 (MQ=255) aaTGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACgg > 2:5259788/1‑140 (MQ=255) aaTGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACgg > 2:5151019/1‑140 (MQ=255) ttatgaACCCGGGGACAGGAAAAACATCTGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCGGCCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATCAAAGCGACGGga < 2:1134385/138‑1 (MQ=255) tgatgaACCCGGTGACAGGAAAAACATCTGCCGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAACCAGAAAGCTCGGCCCGCAAATGAAAGCGACGGga < 2:5929702/140‑1 (MQ=255) atgaACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCGGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGgaga < 2:3452475/140‑1 (MQ=255) aaCCCGGTGACAGGAAAAACTTATCCAGCTTTTCAACCGGCTCTGGACTCCGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATACGTTTTAATCACCAAACAGAAAGCGCGGCACGCAAATGAAAGCGACGGGAGAGGt < 1:3021171/140‑1 (MQ=255) aCCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTc > 1:7559462/1‑140 (MQ=255) cccGGTGACCGGAAAAACATCTCCAGCATTTGACCCGGCTCTTGACGACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGAGAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCa < 2:2301125/140‑1 (MQ=255) cccGGTCACAGGAAAAACATATGCACCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCGGGCCGTTTGATACGTTTGAATCCGCAAACACAAAGCTCGGAACGCAAATGAAAGCGACGGGAGAGGTCa < 1:144311/140‑1 (MQ=255) tGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCTGCACACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCg > 1:7479216/1‑140 (MQ=255) tGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCg < 2:2103788/140‑1 (MQ=255) aaaaCATATGCAGCATTTTAACGGGCTCTTTACTACGTCTTATCCAAAATTCCGCGCGGGCCGTTTTATAAGTTTGAATCAGCAAACATAAACCTCGGCACGAAAATCAAAGCGACGGGAGAGGTCATGGCGATTGGCCg < 1:6039185/140‑1 (MQ=255) accATATGCCGCATTTGAACCGGCTCTTGACCACGTCTTATCCAAACTTCCGCGGTGGCCGTTTGATAAGTTTGAATCAGCACACAGAACGCGCGGCACGCAAATTAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCa < 1:138146/138‑1 (MQ=255) aaCATATGCAGCATTTTAACCGGCTCTTGACTACGTCGTATCAAAAATTCCGCGCGGGCCGTTTTATAAGTTTGAATCAGCAAACAGAAAGCTCGGCCCGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCa < 2:4889904/140‑1 (MQ=255) aaCATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAAACAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCa < 2:1729866/140‑1 (MQ=255) aaCATATCCAGCATTTGACCCGGCTCTTGCCTACGTCGTAACCAAATTTCCGCGCGGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAACGCGACGGGAGAGGTCATGGCGATTGGCCGCa < 1:1600135/140‑1 (MQ=255) aaCATAGCCCGCATTGGAACCGGCTCTGGACTACGTCGTACCCAAAATGCCGCGCGGGCCGTTTGATAAGTTTGAACCAGAAAACACAAAGCTCGCCACGCAAATGAACGCGACGGGAGAGGTCATGGCGATTGGCCGCa < 1:6323753/140‑1 (MQ=255) gccgcaTTTGAACCGGCTCTTGACTACGTCGTATCCAACTGTCCGCGCTGGCCGTTTGATAAGTTTGACTCAGCAACCAGAACGCTCGGCACGCAAATGAACGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGa < 2:2810975/137‑1 (MQ=255) gcagcaTTTGAACGGGCTGTTGACTACGTCGTATCCAAAATTCCGCGCGGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATTAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGa < 2:3341394/140‑1 (MQ=255) ccagcaTTTTAACGGGCTCTTGACTACGTCTTATCCAAAATCCCGCGCTGGCCGTTTGATAATTTTGAATCAGCAAACAGAAAGCTCGGAACGAAAATGAACGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGa < 1:5020443/139‑1 (MQ=255) caTTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAagag > 2:849168/1‑140 (MQ=255) caTTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAagag > 1:6817778/1‑140 (MQ=255) aTTTGAACCGGCTGTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAACTTTGAATCAGCAAACAGAAACCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGt < 2:6303476/140‑1 (MQ=255) aTTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCGGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGt < 2:2908090/140‑1 (MQ=255) tttGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCACATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTc > 1:4234187/1‑140 (MQ=255) tttGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCTATTGGCCGCACGCTTGAAGAGTc > 1:5416503/1‑140 (MQ=255) tttGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTc > 1:959054/1‑140 (MQ=255) tttGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTc > 2:11994/1‑140 (MQ=255) tttaaCCGGCTCTTGACTCCGTCGTATCCAAAATTCCGCGCTGGCCGTTTTATAAGTTTGAATCAGCAACCATAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCa < 1:1184646/137‑1 (MQ=255) ttGACCCGGCTCTGGACTACGTCGGAGCCAAAATTCCGCGCGGGCGGTTTGATAAGTTTCAATCAGCAAACAGAACGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCa < 1:526180/140‑1 (MQ=255) ttGAACCGGGTCTTGACTCCGTCGTAACCACAATTCCGCGCTGGCCGTTTGATACGTTTGAAGCCGCAAACACAAAGCTCGGCACGAAAATCAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCa < 1:2545360/140‑1 (MQ=255) ttGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAACGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCa < 1:1724850/140‑1 (MQ=255) ttGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCa < 2:7374168/140‑1 (MQ=255) ttGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCGGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAACCTCGGCACGCAAATGAACGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCa < 1:2430782/140‑1 (MQ=255) ttGAACCGGCTCTGGACTCCGTCGTATCAAAAATTCCGCGCGGGCCGTTTTATAATTTTGAATCAGAAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCa < 1:4937567/140‑1 (MQ=255) cGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTg < 2:5434800/140‑1 (MQ=255) cGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCGGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCCCGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTg < 2:4653139/140‑1 (MQ=255) cGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCGGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTg < 2:7169667/140‑1 (MQ=255) ggCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGa > 1:2246232/1‑140 (MQ=255) ggCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCGTGAAGAGTCATTGCTGa > 2:6513213/1‑140 (MQ=255) ctTGACTACGGCGTATCCAAAATTCCGCGCGGGCGGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGCAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGc < 2:1056192/140‑1 (MQ=255) tACGTCGTATCAAAATTTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACCCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCg < 1:3079992/140‑1 (MQ=255) aggtcgtATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGt > 1:20964/3‑140 (MQ=255) aCGTCGTATCCAAAATTCCGCGCGGGCCGTTTTATAAGTTTCAATCAGCAAACAGAAACCTCGGCACGCAAATGAACGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGt < 1:6093480/140‑1 (MQ=255) cgtcgtCTCAAAAATGCCGCGCTGGCCGTTTTTTAATTTTGAATCAGCAAACATAATTCTCGTCACGAAAATCAAAGCGAGGGGAGAGGTCATGGCGATTGGCCTCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGtt < 1:5682696/140‑1 (MQ=255) cgtcgtATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGtt > 1:1117493/1‑140 (MQ=255) cgtcgtATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGtt > 1:3191727/1‑140 (MQ=255) cgtcgtATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGtt > 1:3603151/1‑140 (MQ=255) cgtcgtATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGtt > 1:2297533/1‑140 (MQ=255) cgtcgtATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGtt > 1:4865718/1‑140 (MQ=255) cgtcgtATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGtt > 1:6758292/1‑140 (MQ=255) cgtcgtATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGtt > 1:5161673/1‑140 (MQ=255) gtcgtATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTc > 2:3730978/1‑140 (MQ=255) cgtCTCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCAc > 2:7425078/1‑140 (MQ=255) cgtATCCAAAATTCCGCGCTGGCCGTTTGAGAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGCGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCAc > 2:2584850/1‑140 (MQ=255) tATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCa < 2:4359488/102‑1 (MQ=255) tATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTg > 2:701945/1‑140 (MQ=255) tATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTg > 2:6691037/1‑140 (MQ=255) tATCCAAAATTCCGCGCTGGCCGTTTGATAAGTGTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTg > 1:7349518/1‑140 (MQ=255) tATCCAAAATTCCGCGCTGGCCGGTTGATAAGGTTGAAGCAGCAAACAGAACGCTCGGCACGCAAATGAATGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGTGTCCTTGCTGAAGGCTGTGGGTTCACTg > 2:3034422/1‑140 (MQ=255) cAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTGGAAg < 2:1875933/140‑1 (MQ=255) cAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTGGAAg < 2:2732884/140‑1 (MQ=255) cAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAAGGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTGGAAg < 1:7055868/140‑1 (MQ=255) aaTTCCGCGCTGGCCTTTTGATAAGTTTGAATCACCAAACACAACGCTCGGCACGCAAATCAACGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTGGAAGCgg < 1:1003392/140‑1 (MQ=255) aaTTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCa > 1:2777767/1‑109 (MQ=255) aTTCCGCGCGGGCCGTTTGATACGTTTGAATCAGCAAACAGAACGCTCGGCACGCAAATCAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTGGAAGCGGa < 1:4721028/140‑1 (MQ=255) cgcTGGCGGTTTGATACGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTGGAAGCGGATGTGTa < 2:3154846/140‑1 (MQ=255) cgcTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGAGGGGAGAGGTCATGGCGATTGGCCGCAGGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTCGAAGCGGATGTGTa > 1:805326/1‑140 (MQ=255) cgcTGGCCGTTTGATAAGTTTGAAGCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTGGAAGCGGaggggga > 1:1792675/1‑134 (MQ=255) | ACAGGATATCCGATTGCAAAGCTCGCTGCTAAAATCGCTGTCGGCCTTTCATTAGATGAAATGATGAACCCGGTGACAGGAAAAACATATGCAGCATTTGAACCGGCTCTTGACTACGTCGTATCCAAAATTCCGCGCTGGCCGTTTGATAAGTTTGAATCAGCAAACAGAAAGCTCGGCACGCAAATGAAAGCGACGGGAGAGGTCATGGCGATTGGCCGCACGCTTGAAGAGTCATTGCTGAAGGCTGTGCGTTCACTGGAAGCGGATGTGTA > NZ_CP034943/1591217‑1591491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |